RNA–Protein interactions for RNA: ENST00000553297.1

NID2-202, Transcript of nidogen 2, humanhuman

TSL 2

Gene NID2, Length 798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-202ENST00000553297 TRPM3Q9HCF6 1732 aaPredicted RBP13.44□□□□□ -0.26
NID2-202ENST00000553297 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
NID2-202ENST00000553297 SF3B2Q13435 895 aaKnown RBP13.43□□□□□ -0.26
NID2-202ENST00000553297 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
NID2-202ENST00000553297 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
NID2-202ENST00000553297 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
NID2-202ENST00000553297 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
NID2-202ENST00000553297 VPS72Q15906 364 aa13.41□□□□□ -0.26
NID2-202ENST00000553297 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
NID2-202ENST00000553297 GLI3P10071 1580 aa13.41□□□□□ -0.26
NID2-202ENST00000553297 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
NID2-202ENST00000553297 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
NID2-202ENST00000553297 ATP7BP35670 1465 aa13.4□□□□□ -0.26
NID2-202ENST00000553297 BTG4Q9NY30 223 aa13.39□□□□□ -0.27
NID2-202ENST00000553297 BRWD3Q6RI45 1802 aa13.39□□□□□ -0.27
NID2-202ENST00000553297 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
NID2-202ENST00000553297 TOPAZ1Q8N9V7 1692 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
NID2-202ENST00000553297 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
NID2-202ENST00000553297 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
NID2-202ENST00000553297 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
NID2-202ENST00000553297 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
NID2-202ENST00000553297 ACEP12821 1306 aa13.36□□□□□ -0.27
NID2-202ENST00000553297 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
NID2-202ENST00000553297 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
NID2-202ENST00000553297 BLMP54132 1417 aaPredicted RBP13.35□□□□□ -0.27
NID2-202ENST00000553297 CRYBG1Q9Y4K1 1723 aa13.35□□□□□ -0.27
NID2-202ENST00000553297 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
NID2-202ENST00000553297 EVA1CP58658 441 aa13.34□□□□□ -0.27
NID2-202ENST00000553297 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
NID2-202ENST00000553297 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
NID2-202ENST00000553297 L3MBTL2Q969R5 705 aa13.34□□□□□ -0.27
NID2-202ENST00000553297 POLR3AO14802 1390 aaPredicted RBP13.33□□□□□ -0.27
NID2-202ENST00000553297 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.27
NID2-202ENST00000553297 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
NID2-202ENST00000553297 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
NID2-202ENST00000553297 EVC2Q86UK5 1308 aa13.33□□□□□ -0.28
NID2-202ENST00000553297 PLEKHG3A1L390 1219 aa13.32□□□□□ -0.28
NID2-202ENST00000553297 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
NID2-202ENST00000553297 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
NID2-202ENST00000553297 STRN4Q9NRL3 753 aa13.32□□□□□ -0.28
NID2-202ENST00000553297 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
NID2-202ENST00000553297 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
NID2-202ENST00000553297 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
NID2-202ENST00000553297 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
NID2-202ENST00000553297 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
NID2-202ENST00000553297 BAG6P46379 1132 aa13.3□□□□□ -0.28
NID2-202ENST00000553297 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
NID2-202ENST00000553297 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
NID2-202ENST00000553297 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
NID2-202ENST00000553297 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
NID2-202ENST00000553297 ZBTB7CA1YPR0 619 aa13.29□□□□□ -0.28
NID2-202ENST00000553297 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
NID2-202ENST00000553297 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
NID2-202ENST00000553297 CABP1Q9NZU7 370 aa13.27□□□□□ -0.29
NID2-202ENST00000553297 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
NID2-202ENST00000553297 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
NID2-202ENST00000553297 NLRP6P59044 892 aa13.26□□□□□ -0.29
NID2-202ENST00000553297 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
NID2-202ENST00000553297 USP6P35125 1406 aa13.25□□□□□ -0.29
NID2-202ENST00000553297 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
NID2-202ENST00000553297 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
NID2-202ENST00000553297 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
NID2-202ENST00000553297 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
NID2-202ENST00000553297 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
NID2-202ENST00000553297 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
NID2-202ENST00000553297 CPDO75976 1380 aa13.24□□□□□ -0.29
NID2-202ENST00000553297 GCP02774 474 aa13.24□□□□□ -0.29
NID2-202ENST00000553297 CARD11Q9BXL7 1154 aa13.24□□□□□ -0.29
NID2-202ENST00000553297 AKAP12Q02952 1782 aa13.23□□□□□ -0.29
NID2-202ENST00000553297 USP19O94966 1318 aa13.23□□□□□ -0.29
NID2-202ENST00000553297 FAM196AQ6ZSG2 479 aa13.23□□□□□ -0.29
NID2-202ENST00000553297 ZBTB22O15209 634 aa13.22□□□□□ -0.29
NID2-202ENST00000553297 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
NID2-202ENST00000553297 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
NID2-202ENST00000553297 EP400Q96L91 3159 aa13.22□□□□□ -0.29
NID2-202ENST00000553297 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
NID2-202ENST00000553297 FAM182BQ5T319 152 aa13.21□□□□□ -0.29
NID2-202ENST00000553297 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
NID2-202ENST00000553297 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
NID2-202ENST00000553297 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.3
NID2-202ENST00000553297 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
NID2-202ENST00000553297 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
NID2-202ENST00000553297 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
NID2-202ENST00000553297 PIK3C2AO00443 1686 aa13.2□□□□□ -0.3
NID2-202ENST00000553297 SLIT3O75094 1523 aa13.19□□□□□ -0.3
NID2-202ENST00000553297 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
NID2-202ENST00000553297 C11orf95C9JLR9 678 aaPredicted RBP13.19□□□□□ -0.3
NID2-202ENST00000553297 SOX12O15370 315 aa13.19□□□□□ -0.3
NID2-202ENST00000553297 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
NID2-202ENST00000553297 TMC1Q8TDI8 760 aa13.19□□□□□ -0.3
NID2-202ENST00000553297 CRB1P82279 1406 aa13.19□□□□□ -0.3
NID2-202ENST00000553297 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
NID2-202ENST00000553297 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
NID2-202ENST00000553297 TRIM26Q12899 539 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms