RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 NSD3Q9BZ95 1437 aa15.29■□□□□ 0.04
CACNB3-224ENST00000552812 TERF2IPQ9NYB0 399 aa15.29■□□□□ 0.04
CACNB3-224ENST00000552812 ATP7BP35670 1465 aa15.28■□□□□ 0.04
CACNB3-224ENST00000552812 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
CACNB3-224ENST00000552812 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.04
CACNB3-224ENST00000552812 NSD2O96028 1365 aa15.26■□□□□ 0.03
CACNB3-224ENST00000552812 CGNL1Q0VF96 1302 aa15.26■□□□□ 0.03
CACNB3-224ENST00000552812 KCNA6P17658 529 aa15.26■□□□□ 0.03
CACNB3-224ENST00000552812 FARP1Q9Y4F1 1045 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-224ENST00000552812 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
CACNB3-224ENST00000552812 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
CACNB3-224ENST00000552812 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-224ENST00000552812 CABP1Q9NZU7 370 aa15.24■□□□□ 0.03
CACNB3-224ENST00000552812 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
CACNB3-224ENST00000552812 NUDT16Q96DE0 195 aaKnown RBP15.23■□□□□ 0.03
CACNB3-224ENST00000552812 PPIP5K1Q6PFW1 1433 aa15.23■□□□□ 0.03
CACNB3-224ENST00000552812 LMTK3Q96Q04 1460 aa15.23■□□□□ 0.03
CACNB3-224ENST00000552812 TOPAZ1Q8N9V7 1692 aa15.22■□□□□ 0.03
CACNB3-224ENST00000552812 CDC42BPGQ6DT37 1551 aa15.22■□□□□ 0.03
CACNB3-224ENST00000552812 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
CACNB3-224ENST00000552812 PPP2R1AP30153 589 aa15.21■□□□□ 0.03
CACNB3-224ENST00000552812 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
CACNB3-224ENST00000552812 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
CACNB3-224ENST00000552812 PRR36Q9H6K5 1346 aa15.2■□□□□ 0.02
CACNB3-224ENST00000552812 ITSN1Q15811 1721 aa15.2■□□□□ 0.02
CACNB3-224ENST00000552812 ANKRD26Q9UPS8 1709 aa15.19■□□□□ 0.02
CACNB3-224ENST00000552812 ANKARQ7Z5J8 1434 aa15.19■□□□□ 0.02
CACNB3-224ENST00000552812 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
CACNB3-224ENST00000552812 MON2Q7Z3U7 1717 aa15.19■□□□□ 0.02
CACNB3-224ENST00000552812 NKTRP30414 1462 aaKnown RBP15.19■□□□□ 0.02
CACNB3-224ENST00000552812 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
CACNB3-224ENST00000552812 NALCNQ8IZF0 1738 aa15.18■□□□□ 0.02
CACNB3-224ENST00000552812 FMN2Q9NZ56 1722 aa15.18■□□□□ 0.02
CACNB3-224ENST00000552812 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
CACNB3-224ENST00000552812 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
CACNB3-224ENST00000552812 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
CACNB3-224ENST00000552812 INSRP06213 1382 aa15.17■□□□□ 0.02
CACNB3-224ENST00000552812 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
CACNB3-224ENST00000552812 HSPA2P54652 639 aa15.16■□□□□ 0.02
CACNB3-224ENST00000552812 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB3-224ENST00000552812 PLSCR2Q9NRY7 297 aa15.15■□□□□ 0.02
CACNB3-224ENST00000552812 FYB1O15117 783 aa15.14■□□□□ 0.01
CACNB3-224ENST00000552812 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
CACNB3-224ENST00000552812 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
CACNB3-224ENST00000552812 POLR3AO14802 1390 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-224ENST00000552812 NRKQ7Z2Y5 1582 aa15.13■□□□□ 0.01
CACNB3-224ENST00000552812 RGPD8O14715 1765 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-224ENST00000552812 ACEP12821 1306 aa15.11■□□□□ 0.01
CACNB3-224ENST00000552812 USP6P35125 1406 aa15.11■□□□□ 0.01
CACNB3-224ENST00000552812 NCOA3Q9Y6Q9 1424 aa15.11■□□□□ 0.01
CACNB3-224ENST00000552812 GGNBP2Q9H3C7 697 aa15.11■□□□□ 0.01
CACNB3-224ENST00000552812 NUTM2FA1L443 756 aa15.1■□□□□ 0.01
CACNB3-224ENST00000552812 ZBED9Q6R2W3 1325 aa15.1■□□□□ 0.01
CACNB3-224ENST00000552812 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-224ENST00000552812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.09■□□□□ 0.01
CACNB3-224ENST00000552812 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
CACNB3-224ENST00000552812 BLMP54132 1417 aaPredicted RBP15.08■□□□□ 0.01
CACNB3-224ENST00000552812 STRCP1A6NGW2 1772 aa15.08■□□□□ 0.01
CACNB3-224ENST00000552812 WDR43Q15061 677 aaKnown RBP eCLIP15.08■□□□□ 0
CACNB3-224ENST00000552812 SSH2Q76I76 1423 aa15.08■□□□□ 0
CACNB3-224ENST00000552812 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
CACNB3-224ENST00000552812 C14orf37Q86TY3 774 aa15.07■□□□□ 0
CACNB3-224ENST00000552812 DCCP43146 1447 aa15.07■□□□□ 0
CACNB3-224ENST00000552812 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
CACNB3-224ENST00000552812 TTC21AQ8NDW8 1320 aa15.06■□□□□ 0
CACNB3-224ENST00000552812 MTHFSP49914 203 aa15.06■□□□□ 0
CACNB3-224ENST00000552812 CFAP53Q96M91 514 aa15.06■□□□□ 0
CACNB3-224ENST00000552812 NGDNQ8NEJ9 315 aaKnown RBP15.06■□□□□ 0
CACNB3-224ENST00000552812 RBM33Q96EV2 1170 aaKnown RBP15.06■□□□□ 0
CACNB3-224ENST00000552812 C19orf44Q9H6X5 657 aa15.06■□□□□ 0
CACNB3-224ENST00000552812 NME9Q86XW9 330 aa15.05■□□□□ -0
CACNB3-224ENST00000552812 PMFBP1Q8TBY8 1022 aa15.05■□□□□ -0
CACNB3-224ENST00000552812 TMEM94Q12767 1356 aa15.04■□□□□ -0
CACNB3-224ENST00000552812 AATKQ6ZMQ8 1374 aa15.04■□□□□ -0
CACNB3-224ENST00000552812 COG3Q96JB2 828 aa15.04■□□□□ -0
CACNB3-224ENST00000552812 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
CACNB3-224ENST00000552812 SHPRHQ149N8 1683 aa15.04■□□□□ -0
CACNB3-224ENST00000552812 PHF8Q9UPP1 1060 aa15.03■□□□□ -0
CACNB3-224ENST00000552812 OVOS2A0A0J9YW53 1432 aa15.03■□□□□ -0
CACNB3-224ENST00000552812 OVOS2Q6IE36 1432 aa15.03■□□□□ -0
CACNB3-224ENST00000552812 SMG6Q86US8 1419 aaKnown RBP15.02□□□□□ -0.01
CACNB3-224ENST00000552812 PNPLA6Q8IY17 1366 aa15.02□□□□□ -0.01
CACNB3-224ENST00000552812 USP31Q70CQ4 1352 aa15.01□□□□□ -0.01
CACNB3-224ENST00000552812 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-224ENST00000552812 KIF1AQ12756 1690 aa15.01□□□□□ -0.01
CACNB3-224ENST00000552812 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
CACNB3-224ENST00000552812 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
CACNB3-224ENST00000552812 MAP2P11137 1827 aaKnown RBP15□□□□□ -0.01
CACNB3-224ENST00000552812 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
CACNB3-224ENST00000552812 LRRC7Q96NW7 1537 aa14.99□□□□□ -0.01
CACNB3-224ENST00000552812 ATF3P18847 181 aa14.99□□□□□ -0.01
CACNB3-224ENST00000552812 ESCO1Q5FWF5 840 aa14.99□□□□□ -0.01
CACNB3-224ENST00000552812 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
CACNB3-224ENST00000552812 CDK12Q9NYV4 1490 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-224ENST00000552812 PIK3C2AO00443 1686 aa14.99□□□□□ -0.01
CACNB3-224ENST00000552812 MSH6P52701 1360 aa14.98□□□□□ -0.01
CACNB3-224ENST00000552812 MST1RQ04912 1400 aa14.98□□□□□ -0.01
CACNB3-224ENST00000552812 XIRP1Q702N8 1843 aaKnown RBP14.98□□□□□ -0.01
CACNB3-224ENST00000552812 CADPS2Q86UW7 1296 aa14.97□□□□□ -0.01
CACNB3-224ENST00000552812 NUDCQ9Y266 331 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms