RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
TMEM116-217ENST00000552801 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
TMEM116-217ENST00000552801 USP32Q8NFA0 1604 aa12.7□□□□□ -0.38
TMEM116-217ENST00000552801 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
TMEM116-217ENST00000552801 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
TMEM116-217ENST00000552801 TRAK1Q9UPV9 953 aa12.69□□□□□ -0.38
TMEM116-217ENST00000552801 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
TMEM116-217ENST00000552801 CABLES1Q8TDN4 633 aa12.69□□□□□ -0.38
TMEM116-217ENST00000552801 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
TMEM116-217ENST00000552801 SBNO1A3KN83 1393 aa12.68□□□□□ -0.38
TMEM116-217ENST00000552801 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
TMEM116-217ENST00000552801 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-217ENST00000552801 NGDNQ8NEJ9 315 aaKnown RBP12.68□□□□□ -0.38
TMEM116-217ENST00000552801 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-217ENST00000552801 NRXN1Q9ULB1 1477 aa12.67□□□□□ -0.38
TMEM116-217ENST00000552801 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
TMEM116-217ENST00000552801 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
TMEM116-217ENST00000552801 SLIT2O94813 1529 aa12.67□□□□□ -0.38
TMEM116-217ENST00000552801 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
TMEM116-217ENST00000552801 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
TMEM116-217ENST00000552801 VPS72Q15906 364 aa12.66□□□□□ -0.38
TMEM116-217ENST00000552801 SEPT12Q8IYM1 358 aa12.66□□□□□ -0.38
TMEM116-217ENST00000552801 STAC3Q96MF2 364 aa12.66□□□□□ -0.38
TMEM116-217ENST00000552801 PLCH1Q4KWH8 1693 aa12.66□□□□□ -0.38
TMEM116-217ENST00000552801 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-217ENST00000552801 FKBP8Q14318 412 aa12.64□□□□□ -0.39
TMEM116-217ENST00000552801 KRT27Q7Z3Y8 459 aa12.64□□□□□ -0.39
TMEM116-217ENST00000552801 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-217ENST00000552801 GLI3P10071 1580 aa12.63□□□□□ -0.39
TMEM116-217ENST00000552801 BRWD3Q6RI45 1802 aa12.63□□□□□ -0.39
TMEM116-217ENST00000552801 ADGRB2O60241 1585 aa12.63□□□□□ -0.39
TMEM116-217ENST00000552801 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
TMEM116-217ENST00000552801 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-217ENST00000552801 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
TMEM116-217ENST00000552801 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
TMEM116-217ENST00000552801 TULP4Q9NRJ4 1543 aa12.61□□□□□ -0.39
TMEM116-217ENST00000552801 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
TMEM116-217ENST00000552801 BAG6P46379 1132 aa12.61□□□□□ -0.39
TMEM116-217ENST00000552801 PRDM11Q9NQV5 511 aa12.61□□□□□ -0.39
TMEM116-217ENST00000552801 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
TMEM116-217ENST00000552801 ADGRB1O14514 1584 aa12.6□□□□□ -0.39
TMEM116-217ENST00000552801 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
TMEM116-217ENST00000552801 DEFB132Q7Z7B7 95 aa12.58□□□□□ -0.4
TMEM116-217ENST00000552801 TRPM3Q9HCF6 1732 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-217ENST00000552801 EVA1CP58658 441 aa12.57□□□□□ -0.4
TMEM116-217ENST00000552801 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
TMEM116-217ENST00000552801 HRCP23327 699 aa12.56□□□□□ -0.4
TMEM116-217ENST00000552801 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
TMEM116-217ENST00000552801 ALS2Q96Q42 1657 aa12.56□□□□□ -0.4
TMEM116-217ENST00000552801 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
TMEM116-217ENST00000552801 ARHGEF28Q8N1W1 1705 aaKnown RBP12.56□□□□□ -0.4
TMEM116-217ENST00000552801 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
TMEM116-217ENST00000552801 CDK19Q9BWU1 502 aa12.56□□□□□ -0.4
TMEM116-217ENST00000552801 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
TMEM116-217ENST00000552801 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
TMEM116-217ENST00000552801 NUTM2GQ5VZR2 741 aa12.55□□□□□ -0.4
TMEM116-217ENST00000552801 EP400Q96L91 3159 aa12.54□□□□□ -0.4
TMEM116-217ENST00000552801 ATP7BP35670 1465 aa12.54□□□□□ -0.4
TMEM116-217ENST00000552801 RGPD1P0DJD0 1748 aa12.53□□□□□ -0.4
TMEM116-217ENST00000552801 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
TMEM116-217ENST00000552801 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
TMEM116-217ENST00000552801 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
TMEM116-217ENST00000552801 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
TMEM116-217ENST00000552801 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
TMEM116-217ENST00000552801 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
TMEM116-217ENST00000552801 KIAA0232Q92628 1395 aa12.52□□□□□ -0.41
TMEM116-217ENST00000552801 ACEP12821 1306 aa12.52□□□□□ -0.41
TMEM116-217ENST00000552801 PDE3BQ13370 1112 aa12.52□□□□□ -0.41
TMEM116-217ENST00000552801 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
TMEM116-217ENST00000552801 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-217ENST00000552801 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
TMEM116-217ENST00000552801 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
TMEM116-217ENST00000552801 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-217ENST00000552801 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-217ENST00000552801 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
TMEM116-217ENST00000552801 FAM182BQ5T319 152 aa12.5□□□□□ -0.41
TMEM116-217ENST00000552801 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
TMEM116-217ENST00000552801 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
TMEM116-217ENST00000552801 CENPJQ9HC77 1338 aaPredicted RBP12.49□□□□□ -0.41
TMEM116-217ENST00000552801 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
TMEM116-217ENST00000552801 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
TMEM116-217ENST00000552801 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
TMEM116-217ENST00000552801 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
TMEM116-217ENST00000552801 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
TMEM116-217ENST00000552801 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
TMEM116-217ENST00000552801 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
TMEM116-217ENST00000552801 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
TMEM116-217ENST00000552801 TRIM37O94972 964 aa12.46□□□□□ -0.41
TMEM116-217ENST00000552801 APBA3O96018 575 aa12.46□□□□□ -0.41
TMEM116-217ENST00000552801 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.42
TMEM116-217ENST00000552801 R3HDM1Q15032 1099 aaKnown RBP12.45□□□□□ -0.42
TMEM116-217ENST00000552801 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 LRP5O75197 1615 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
TMEM116-217ENST00000552801 NBPF14Q5TI25 921 aa12.44□□□□□ -0.42
TMEM116-217ENST00000552801 PROM2Q8N271 834 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms