RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 THSD7AQ9UPZ6 1657 aa14.46□□□□□ -0.09
LINC00661-207ENST00000552685 EIF3AQ14152 1382 aaKnown RBP14.46□□□□□ -0.1
LINC00661-207ENST00000552685 NUDT16Q96DE0 195 aaKnown RBP14.45□□□□□ -0.1
LINC00661-207ENST00000552685 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
LINC00661-207ENST00000552685 ATP7BP35670 1465 aa14.44□□□□□ -0.1
LINC00661-207ENST00000552685 TNS1Q9HBL0 1735 aaKnown RBP14.44□□□□□ -0.1
LINC00661-207ENST00000552685 A0A0G2JS52 829 aa14.44□□□□□ -0.1
LINC00661-207ENST00000552685 MYT1Q01538 1121 aa14.44□□□□□ -0.1
LINC00661-207ENST00000552685 FAM98CQ17RN3 349 aaKnown RBP14.44□□□□□ -0.1
LINC00661-207ENST00000552685 COL14A1Q05707 1796 aaKnown RBP14.43□□□□□ -0.1
LINC00661-207ENST00000552685 NBPF1Q3BBV0 1214 aa14.43□□□□□ -0.1
LINC00661-207ENST00000552685 NUTM2GQ5VZR2 741 aa14.43□□□□□ -0.1
LINC00661-207ENST00000552685 KRT27Q7Z3Y8 459 aa14.43□□□□□ -0.1
LINC00661-207ENST00000552685 STAC3Q96MF2 364 aa14.43□□□□□ -0.1
LINC00661-207ENST00000552685 CDK19Q9BWU1 502 aa14.43□□□□□ -0.1
LINC00661-207ENST00000552685 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
LINC00661-207ENST00000552685 ITSN1Q15811 1721 aa14.41□□□□□ -0.1
LINC00661-207ENST00000552685 PSDA5PKW4 1024 aaPredicted RBP14.4□□□□□ -0.1
LINC00661-207ENST00000552685 CHRNA2Q15822 529 aa14.4□□□□□ -0.1
LINC00661-207ENST00000552685 PRDM11Q9NQV5 511 aa14.4□□□□□ -0.1
LINC00661-207ENST00000552685 PHRF1Q9P1Y6 1649 aaKnown RBP14.39□□□□□ -0.11
LINC00661-207ENST00000552685 ACEP12821 1306 aa14.39□□□□□ -0.11
LINC00661-207ENST00000552685 SPATA31A5Q5VU36 1347 aa14.39□□□□□ -0.11
LINC00661-207ENST00000552685 SPATA31A7Q8IWB4 1347 aa14.39□□□□□ -0.11
LINC00661-207ENST00000552685 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
LINC00661-207ENST00000552685 KIAA1210Q9ULL0 1709 aa14.38□□□□□ -0.11
LINC00661-207ENST00000552685 KIAA0232Q92628 1395 aa14.38□□□□□ -0.11
LINC00661-207ENST00000552685 ZC3H6P61129 1189 aaKnown RBP14.38□□□□□ -0.11
LINC00661-207ENST00000552685 SF3B2Q13435 895 aaKnown RBP14.38□□□□□ -0.11
LINC00661-207ENST00000552685 TOPAZ1Q8N9V7 1692 aa14.38□□□□□ -0.11
LINC00661-207ENST00000552685 DISP2A7MBM2 1401 aa14.38□□□□□ -0.11
LINC00661-207ENST00000552685 NBPF8Q3BBV2 869 aa14.37□□□□□ -0.11
LINC00661-207ENST00000552685 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
LINC00661-207ENST00000552685 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
LINC00661-207ENST00000552685 CCDC61Q9Y6R9 512 aa14.36□□□□□ -0.11
LINC00661-207ENST00000552685 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
LINC00661-207ENST00000552685 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
LINC00661-207ENST00000552685 PLEKHG3A1L390 1219 aa14.34□□□□□ -0.11
LINC00661-207ENST00000552685 SRPK2P78362 688 aaKnown RBP14.34□□□□□ -0.11
LINC00661-207ENST00000552685 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
LINC00661-207ENST00000552685 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
LINC00661-207ENST00000552685 SIN3AQ96ST3 1273 aa14.33□□□□□ -0.12
LINC00661-207ENST00000552685 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
LINC00661-207ENST00000552685 SPATA31A1Q5TZJ5 1347 aa14.33□□□□□ -0.12
LINC00661-207ENST00000552685 LMO7Q8WWI1 1683 aa14.33□□□□□ -0.12
LINC00661-207ENST00000552685 PPIP5K1Q6PFW1 1433 aa14.32□□□□□ -0.12
LINC00661-207ENST00000552685 ABTB2Q8N961 1025 aa14.32□□□□□ -0.12
LINC00661-207ENST00000552685 L3MBTL2Q969R5 705 aa14.32□□□□□ -0.12
LINC00661-207ENST00000552685 RREB1Q92766 1687 aa14.32□□□□□ -0.12
LINC00661-207ENST00000552685 QRICH2Q9H0J4 1663 aa14.32□□□□□ -0.12
LINC00661-207ENST00000552685 CAMTA1Q9Y6Y1 1673 aa14.31□□□□□ -0.12
LINC00661-207ENST00000552685 BAG6P46379 1132 aa14.31□□□□□ -0.12
LINC00661-207ENST00000552685 EZH2Q15910 746 aaKnown RBP14.31□□□□□ -0.12
LINC00661-207ENST00000552685 NUP188Q5SRE5 1749 aa14.3□□□□□ -0.12
LINC00661-207ENST00000552685 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
LINC00661-207ENST00000552685 CAMKK2Q96RR4 588 aa14.3□□□□□ -0.12
LINC00661-207ENST00000552685 ZBTB7CA1YPR0 619 aa14.29□□□□□ -0.12
LINC00661-207ENST00000552685 EVA1CP58658 441 aa14.29□□□□□ -0.12
LINC00661-207ENST00000552685 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
LINC00661-207ENST00000552685 LARP1Q6PKG0 1096 aaKnown RBP14.29□□□□□ -0.12
LINC00661-207ENST00000552685 CABP1Q9NZU7 370 aa14.29□□□□□ -0.12
LINC00661-207ENST00000552685 SSH2Q76I76 1423 aa14.29□□□□□ -0.12
LINC00661-207ENST00000552685 USP19O94966 1318 aa14.28□□□□□ -0.12
LINC00661-207ENST00000552685 TRIM37O94972 964 aa14.27□□□□□ -0.13
LINC00661-207ENST00000552685 GCP02774 474 aa14.26□□□□□ -0.13
LINC00661-207ENST00000552685 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
LINC00661-207ENST00000552685 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
LINC00661-207ENST00000552685 TRPM1Q7Z4N2 1603 aa14.26□□□□□ -0.13
LINC00661-207ENST00000552685 CPDO75976 1380 aa14.25□□□□□ -0.13
LINC00661-207ENST00000552685 USP6P35125 1406 aa14.24□□□□□ -0.13
LINC00661-207ENST00000552685 NLRP6P59044 892 aa14.24□□□□□ -0.13
LINC00661-207ENST00000552685 PDE3BQ13370 1112 aa14.23□□□□□ -0.13
LINC00661-207ENST00000552685 FAM196AQ6ZSG2 479 aa14.23□□□□□ -0.13
LINC00661-207ENST00000552685 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
LINC00661-207ENST00000552685 TCP11L2Q8N4U5 519 aa14.23□□□□□ -0.13
LINC00661-207ENST00000552685 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
LINC00661-207ENST00000552685 EVC2Q86UK5 1308 aa14.22□□□□□ -0.13
LINC00661-207ENST00000552685 PARP4Q9UKK3 1724 aaKnown RBP14.22□□□□□ -0.13
LINC00661-207ENST00000552685 APBA3O96018 575 aa14.22□□□□□ -0.13
LINC00661-207ENST00000552685 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
LINC00661-207ENST00000552685 PIK3C2AO00443 1686 aa14.22□□□□□ -0.13
LINC00661-207ENST00000552685 SOX12O15370 315 aa14.21□□□□□ -0.13
LINC00661-207ENST00000552685 LRRC37A3O60309 1634 aa14.21□□□□□ -0.13
LINC00661-207ENST00000552685 SLIT3O75094 1523 aa14.2□□□□□ -0.14
LINC00661-207ENST00000552685 COL18A1P39060 1754 aa14.2□□□□□ -0.14
LINC00661-207ENST00000552685 PTF1AQ7RTS3 328 aa14.2□□□□□ -0.14
LINC00661-207ENST00000552685 BRD4O60885 1362 aaPredicted RBP14.19□□□□□ -0.14
LINC00661-207ENST00000552685 PARD3Q8TEW0 1356 aa14.19□□□□□ -0.14
LINC00661-207ENST00000552685 TTC21BQ7Z4L5 1316 aa14.18□□□□□ -0.14
LINC00661-207ENST00000552685 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
LINC00661-207ENST00000552685 AKAP12Q02952 1782 aa14.18□□□□□ -0.14
LINC00661-207ENST00000552685 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
LINC00661-207ENST00000552685 CRB1P82279 1406 aa14.17□□□□□ -0.14
LINC00661-207ENST00000552685 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
LINC00661-207ENST00000552685 SBF2Q86WG5 1849 aa14.17□□□□□ -0.14
LINC00661-207ENST00000552685 CASZ1Q86V15 1759 aa14.17□□□□□ -0.14
LINC00661-207ENST00000552685 WNK3Q9BYP7 1800 aa14.16□□□□□ -0.14
LINC00661-207ENST00000552685 TOM1L2Q6ZVM7 507 aa14.16□□□□□ -0.14
LINC00661-207ENST00000552685 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
LINC00661-207ENST00000552685 RGPD5Q99666 1765 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms