RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.08
CHMP4A-210ENST00000552620 GCGRP47871 477 aa8.33□□□□□ -1.08
CHMP4A-210ENST00000552620 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
CHMP4A-210ENST00000552620 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 NDUFV2P19404 249 aa8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 WWC1Q8IX03 1113 aa8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 TARBP1Q13395 1621 aaKnown RBP8.32□□□□□ -1.08
CHMP4A-210ENST00000552620 LILRB3O75022 631 aa8.31□□□□□ -1.08
CHMP4A-210ENST00000552620 FAM98CQ17RN3 349 aaKnown RBP8.31□□□□□ -1.08
CHMP4A-210ENST00000552620 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
CHMP4A-210ENST00000552620 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
CHMP4A-210ENST00000552620 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
CHMP4A-210ENST00000552620 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
CHMP4A-210ENST00000552620 HECW1Q76N89 1606 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 TK2O00142 265 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 SOCS7O14512 581 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 HOXA2O43364 376 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 FDX1P10109 184 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 QPCTQ16769 361 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 ADGRD1Q6QNK2 874 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 MYT1LQ9UL68 1186 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 COG6Q9Y2V7 657 aa8.3□□□□□ -1.08
CHMP4A-210ENST00000552620 LRRIQ1Q96JM4 1722 aa8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 AP1G2O75843 785 aa8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 NEFLP07196 543 aa8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 FBXO31Q5XUX0 539 aaPredicted RBP8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 EPRSP07814 1512 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-210ENST00000552620 IQGAP2Q13576 1575 aa8.28□□□□□ -1.08
CHMP4A-210ENST00000552620 ROCK1Q13464 1354 aa8.28□□□□□ -1.08
CHMP4A-210ENST00000552620 SLC10A3P09131 477 aa8.28□□□□□ -1.08
CHMP4A-210ENST00000552620 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
CHMP4A-210ENST00000552620 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
CHMP4A-210ENST00000552620 MPHOSPH9Q99550 1183 aa8.28□□□□□ -1.08
CHMP4A-210ENST00000552620 CCDC82Q8N4S0 544 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 MTMR14Q8NCE2 650 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 CABLES1Q8TDN4 633 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 RRP7BPQ9NSQ0 103 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 ZNF777Q9ULD5 760 aaPredicted RBP8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 VPS9D1Q9Y2B5 631 aa8.27□□□□□ -1.09
CHMP4A-210ENST00000552620 MRC2Q9UBG0 1479 aa8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 MAGI3Q5TCQ9 1506 aa8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 CCDC97Q96F63 343 aaPredicted RBP8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 HIRIP3Q9BW71 556 aaPredicted RBP8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 ZNF330Q9Y3S2 320 aaPredicted RBP8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 GCC2Q8IWJ2 1684 aa8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 ADAMTS12P58397 1594 aa8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 IFT140Q96RY7 1462 aa8.26□□□□□ -1.09
CHMP4A-210ENST00000552620 KDM5BQ9UGL1 1544 aa8.25□□□□□ -1.09
CHMP4A-210ENST00000552620 PBRM1Q86U86 1689 aa8.25□□□□□ -1.09
CHMP4A-210ENST00000552620 HRO43593 1189 aa8.25□□□□□ -1.09
CHMP4A-210ENST00000552620 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
CHMP4A-210ENST00000552620 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
CHMP4A-210ENST00000552620 SERPINA10Q9UK55 444 aa8.25□□□□□ -1.09
CHMP4A-210ENST00000552620 WDR62O43379 1518 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 KIAA0586Q9BVV6 1533 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 RNF40O75150 1001 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 CFHP08603 1231 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 HSPA5P11021 654 aaKnown RBP8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 MTMR2Q13614 643 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 KMT5BQ4FZB7 885 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 ERICH6BQ5W0A0 696 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 GDPD2Q9HCC8 539 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 CHIC2Q9UKJ5 165 aa8.24□□□□□ -1.09
CHMP4A-210ENST00000552620 ABL2P42684 1182 aa8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 FUT2Q10981 343 aa8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 MRPL50Q8N5N7 158 aaKnown RBP8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 STAC3Q96MF2 364 aa8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 PCDHGC3Q9UN70 934 aa8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
CHMP4A-210ENST00000552620 DAPK1P53355 1430 aa8.21□□□□□ -1.09
CHMP4A-210ENST00000552620 DENND4BO75064 1496 aaPredicted RBP8.21□□□□□ -1.09
CHMP4A-210ENST00000552620 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
CHMP4A-210ENST00000552620 ATP6V1AP38606 617 aa8.21□□□□□ -1.1
CHMP4A-210ENST00000552620 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
CHMP4A-210ENST00000552620 ZFRQ96KR1 1074 aaKnown RBP8.21□□□□□ -1.1
CHMP4A-210ENST00000552620 NDUFB9Q9Y6M9 179 aa8.21□□□□□ -1.1
CHMP4A-210ENST00000552620 WASHC2AQ641Q2 1341 aa8.21□□□□□ -1.1
CHMP4A-210ENST00000552620 ABCC5O15440 1437 aa8.2□□□□□ -1.1
CHMP4A-210ENST00000552620 TSC1Q92574 1164 aa8.2□□□□□ -1.1
CHMP4A-210ENST00000552620 HLA-CQ95604 372 aa8.2□□□□□ -1.1
CHMP4A-210ENST00000552620 PRR14Q9BWN1 585 aa8.2□□□□□ -1.1
CHMP4A-210ENST00000552620 TBC1D2BQ9UPU7 963 aa8.2□□□□□ -1.1
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