RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 RGPD8O14715 1765 aaPredicted RBP15.8■□□□□ 0.12
ATF1-204ENST00000552487 ACEP12821 1306 aa15.8■□□□□ 0.12
ATF1-204ENST00000552487 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
ATF1-204ENST00000552487 KRT27Q7Z3Y8 459 aa15.8■□□□□ 0.12
ATF1-204ENST00000552487 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
ATF1-204ENST00000552487 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
ATF1-204ENST00000552487 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
ATF1-204ENST00000552487 NUTM2GQ5VZR2 741 aa15.79■□□□□ 0.12
ATF1-204ENST00000552487 ARHGEF28Q8N1W1 1705 aaKnown RBP15.79■□□□□ 0.12
ATF1-204ENST00000552487 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
ATF1-204ENST00000552487 KIAA1210Q9ULL0 1709 aa15.79■□□□□ 0.12
ATF1-204ENST00000552487 FAM98CQ17RN3 349 aaKnown RBP15.78■□□□□ 0.12
ATF1-204ENST00000552487 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
ATF1-204ENST00000552487 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
ATF1-204ENST00000552487 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
ATF1-204ENST00000552487 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
ATF1-204ENST00000552487 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.11
ATF1-204ENST00000552487 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.11
ATF1-204ENST00000552487 ZBTB7CA1YPR0 619 aa15.76■□□□□ 0.11
ATF1-204ENST00000552487 ZC3H6P61129 1189 aaKnown RBP15.76■□□□□ 0.11
ATF1-204ENST00000552487 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
ATF1-204ENST00000552487 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
ATF1-204ENST00000552487 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
ATF1-204ENST00000552487 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
ATF1-204ENST00000552487 NWD2Q9ULI1 1742 aa15.75■□□□□ 0.11
ATF1-204ENST00000552487 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
ATF1-204ENST00000552487 BAG6P46379 1132 aa15.74■□□□□ 0.11
ATF1-204ENST00000552487 CHRNA2Q15822 529 aa15.74■□□□□ 0.11
ATF1-204ENST00000552487 COL14A1Q05707 1796 aaKnown RBP15.74■□□□□ 0.11
ATF1-204ENST00000552487 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
ATF1-204ENST00000552487 GLI3P10071 1580 aa15.73■□□□□ 0.11
ATF1-204ENST00000552487 SPATA31A5Q5VU36 1347 aa15.72■□□□□ 0.11
ATF1-204ENST00000552487 SPATA31A7Q8IWB4 1347 aa15.72■□□□□ 0.11
ATF1-204ENST00000552487 TRPM3Q9HCF6 1732 aaPredicted RBP15.72■□□□□ 0.11
ATF1-204ENST00000552487 CABP1Q9NZU7 370 aa15.72■□□□□ 0.11
ATF1-204ENST00000552487 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
ATF1-204ENST00000552487 ONECUT3O60422 494 aaPredicted RBP15.71■□□□□ 0.11
ATF1-204ENST00000552487 NLRP6P59044 892 aa15.71■□□□□ 0.11
ATF1-204ENST00000552487 CARD11Q9BXL7 1154 aa15.71■□□□□ 0.11
ATF1-204ENST00000552487 ABCA3Q99758 1704 aa15.71■□□□□ 0.1
ATF1-204ENST00000552487 ALS2Q96Q42 1657 aa15.7■□□□□ 0.1
ATF1-204ENST00000552487 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
ATF1-204ENST00000552487 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
ATF1-204ENST00000552487 GCP02774 474 aa15.68■□□□□ 0.1
ATF1-204ENST00000552487 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
ATF1-204ENST00000552487 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
ATF1-204ENST00000552487 CPDO75976 1380 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
ATF1-204ENST00000552487 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 DEFB132Q7Z7B7 95 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 TCP11L2Q8N4U5 519 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 KCNH5Q8NCM2 988 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 USP6P35125 1406 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 USP19O94966 1318 aa15.66■□□□□ 0.1
ATF1-204ENST00000552487 TOPAZ1Q8N9V7 1692 aa15.65■□□□□ 0.1
ATF1-204ENST00000552487 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
ATF1-204ENST00000552487 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
ATF1-204ENST00000552487 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
ATF1-204ENST00000552487 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
ATF1-204ENST00000552487 SLC24A1O60721 1099 aa15.64■□□□□ 0.09
ATF1-204ENST00000552487 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
ATF1-204ENST00000552487 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
ATF1-204ENST00000552487 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
ATF1-204ENST00000552487 SOX12O15370 315 aa15.63■□□□□ 0.09
ATF1-204ENST00000552487 BARGINQ6ZT62 677 aa15.63■□□□□ 0.09
ATF1-204ENST00000552487 KTN1Q86UP2 1357 aaKnown RBP15.62■□□□□ 0.09
ATF1-204ENST00000552487 LARP1Q6PKG0 1096 aaKnown RBP15.62■□□□□ 0.09
ATF1-204ENST00000552487 TOM1L2Q6ZVM7 507 aa15.62■□□□□ 0.09
ATF1-204ENST00000552487 NRAPQ86VF7 1730 aa15.62■□□□□ 0.09
ATF1-204ENST00000552487 TRPM1Q7Z4N2 1603 aa15.61■□□□□ 0.09
ATF1-204ENST00000552487 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
ATF1-204ENST00000552487 TERF2IPQ9NYB0 399 aa15.61■□□□□ 0.09
ATF1-204ENST00000552487 EP400Q96L91 3159 aa15.6■□□□□ 0.09
ATF1-204ENST00000552487 FAM182BQ5T319 152 aa15.6■□□□□ 0.09
ATF1-204ENST00000552487 TTC21BQ7Z4L5 1316 aa15.6■□□□□ 0.09
ATF1-204ENST00000552487 NRKQ7Z2Y5 1582 aa15.59■□□□□ 0.09
ATF1-204ENST00000552487 TRIM37O94972 964 aa15.59■□□□□ 0.09
ATF1-204ENST00000552487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
ATF1-204ENST00000552487 AATKQ6ZMQ8 1374 aa15.59■□□□□ 0.09
ATF1-204ENST00000552487 APBA3O96018 575 aa15.58■□□□□ 0.08
ATF1-204ENST00000552487 EN1Q05925 392 aaPredicted RBP15.58■□□□□ 0.08
ATF1-204ENST00000552487 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
ATF1-204ENST00000552487 CRB1P82279 1406 aa15.58■□□□□ 0.08
ATF1-204ENST00000552487 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
ATF1-204ENST00000552487 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
ATF1-204ENST00000552487 DDB1Q16531 1140 aa15.56■□□□□ 0.08
ATF1-204ENST00000552487 NBPF14Q5TI25 921 aa15.56■□□□□ 0.08
ATF1-204ENST00000552487 CRYBG1Q9Y4K1 1723 aa15.56■□□□□ 0.08
ATF1-204ENST00000552487 COL5A2P05997 1499 aaPredicted RBP15.55■□□□□ 0.08
ATF1-204ENST00000552487 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
ATF1-204ENST00000552487 CAMTA1Q9Y6Y1 1673 aa15.54■□□□□ 0.08
ATF1-204ENST00000552487 CPSF1Q10570 1443 aaKnown RBP15.54■□□□□ 0.08
ATF1-204ENST00000552487 WDR17Q8IZU2 1322 aa15.54■□□□□ 0.08
ATF1-204ENST00000552487 PSDA5PKW4 1024 aaPredicted RBP15.54■□□□□ 0.08
ATF1-204ENST00000552487 THSD7AQ9UPZ6 1657 aa15.54■□□□□ 0.08
ATF1-204ENST00000552487 NINLQ9Y2I6 1382 aa15.52■□□□□ 0.08
ATF1-204ENST00000552487 RGPD1P0DJD0 1748 aa15.52■□□□□ 0.08
ATF1-204ENST00000552487 CDCA8Q53HL2 280 aa15.52■□□□□ 0.08
ATF1-204ENST00000552487 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.08
ATF1-204ENST00000552487 PUS7Q96PZ0 661 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms