RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 MTHFSP49914 203 aa16.95■□□□□ 0.3
CACNB3-223ENST00000552480 NME9Q86XW9 330 aa16.95■□□□□ 0.3
CACNB3-223ENST00000552480 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
CACNB3-223ENST00000552480 TTC21AQ8NDW8 1320 aa16.95■□□□□ 0.3
CACNB3-223ENST00000552480 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
CACNB3-223ENST00000552480 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
CACNB3-223ENST00000552480 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
CACNB3-223ENST00000552480 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
CACNB3-223ENST00000552480 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
CACNB3-223ENST00000552480 COG3Q96JB2 828 aa16.93■□□□□ 0.3
CACNB3-223ENST00000552480 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
CACNB3-223ENST00000552480 OVOS2A0A0J9YW53 1432 aa16.92■□□□□ 0.3
CACNB3-223ENST00000552480 OVOS2Q6IE36 1432 aa16.92■□□□□ 0.3
CACNB3-223ENST00000552480 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
CACNB3-223ENST00000552480 DCCP43146 1447 aa16.91■□□□□ 0.3
CACNB3-223ENST00000552480 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
CACNB3-223ENST00000552480 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
CACNB3-223ENST00000552480 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
CACNB3-223ENST00000552480 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
CACNB3-223ENST00000552480 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.3
CACNB3-223ENST00000552480 PIK3C2AO00443 1686 aa16.89■□□□□ 0.29
CACNB3-223ENST00000552480 KIF1AQ12756 1690 aa16.89■□□□□ 0.29
CACNB3-223ENST00000552480 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
CACNB3-223ENST00000552480 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
CACNB3-223ENST00000552480 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
CACNB3-223ENST00000552480 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
CACNB3-223ENST00000552480 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-223ENST00000552480 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
CACNB3-223ENST00000552480 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
CACNB3-223ENST00000552480 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
CACNB3-223ENST00000552480 XIRP1Q702N8 1843 aaKnown RBP16.85■□□□□ 0.29
CACNB3-223ENST00000552480 ESCO1Q5FWF5 840 aa16.85■□□□□ 0.29
CACNB3-223ENST00000552480 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
CACNB3-223ENST00000552480 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
CACNB3-223ENST00000552480 MST1RQ04912 1400 aa16.84■□□□□ 0.29
CACNB3-223ENST00000552480 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
CACNB3-223ENST00000552480 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
CACNB3-223ENST00000552480 DIAPH1O60610 1272 aaKnown RBP16.83■□□□□ 0.28
CACNB3-223ENST00000552480 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
CACNB3-223ENST00000552480 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 MSH6P52701 1360 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 ATF3P18847 181 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
CACNB3-223ENST00000552480 FBLN1P23142 703 aa16.81■□□□□ 0.28
CACNB3-223ENST00000552480 U2AF1L5P0DN76 240 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-223ENST00000552480 U2AF1Q01081 240 aaKnown RBP eCLIP16.8■□□□□ 0.28
CACNB3-223ENST00000552480 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
CACNB3-223ENST00000552480 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
CACNB3-223ENST00000552480 SALL2Q9Y467 1007 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-223ENST00000552480 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-223ENST00000552480 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-223ENST00000552480 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-223ENST00000552480 PSME1Q06323 249 aa16.79■□□□□ 0.28
CACNB3-223ENST00000552480 RRS1Q15050 365 aaKnown RBP16.79■□□□□ 0.28
CACNB3-223ENST00000552480 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
CACNB3-223ENST00000552480 ZNF521Q96K83 1311 aa16.78■□□□□ 0.28
CACNB3-223ENST00000552480 APAF1O14727 1248 aa16.78■□□□□ 0.28
CACNB3-223ENST00000552480 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
CACNB3-223ENST00000552480 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-223ENST00000552480 NLRP6P59044 892 aa16.77■□□□□ 0.28
CACNB3-223ENST00000552480 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
CACNB3-223ENST00000552480 ABTB2Q8N961 1025 aa16.77■□□□□ 0.28
CACNB3-223ENST00000552480 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
CACNB3-223ENST00000552480 IL13P35225 146 aa16.75■□□□□ 0.27
CACNB3-223ENST00000552480 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
CACNB3-223ENST00000552480 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
CACNB3-223ENST00000552480 FOXO3O43524 673 aa16.74■□□□□ 0.27
CACNB3-223ENST00000552480 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
CACNB3-223ENST00000552480 FLT4P35916 1363 aa16.74■□□□□ 0.27
CACNB3-223ENST00000552480 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
CACNB3-223ENST00000552480 FCHSD2O94868 740 aa16.73■□□□□ 0.27
CACNB3-223ENST00000552480 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
CACNB3-223ENST00000552480 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
CACNB3-223ENST00000552480 NFAT5O94916 1531 aa16.73■□□□□ 0.27
CACNB3-223ENST00000552480 ALS2Q96Q42 1657 aa16.72■□□□□ 0.27
CACNB3-223ENST00000552480 SLIT3O75094 1523 aa16.72■□□□□ 0.27
CACNB3-223ENST00000552480 NEFLP07196 543 aa16.72■□□□□ 0.27
CACNB3-223ENST00000552480 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
CACNB3-223ENST00000552480 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
CACNB3-223ENST00000552480 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 RGPD1P0DJD0 1748 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 SOX12O15370 315 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 CDCA7LQ96GN5 454 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
CACNB3-223ENST00000552480 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
CACNB3-223ENST00000552480 EIF4A2Q14240 407 aaKnown RBP16.7■□□□□ 0.26
CACNB3-223ENST00000552480 ILDR1Q86SU0 546 aaPredicted RBP16.7■□□□□ 0.26
CACNB3-223ENST00000552480 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
CACNB3-223ENST00000552480 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
CACNB3-223ENST00000552480 NPHP3Q7Z494 1330 aa16.7■□□□□ 0.26
CACNB3-223ENST00000552480 XPCQ01831 940 aaPredicted RBP16.69■□□□□ 0.26
CACNB3-223ENST00000552480 KCNH5Q8NCM2 988 aa16.69■□□□□ 0.26
CACNB3-223ENST00000552480 LTN1O94822 1766 aa16.69■□□□□ 0.26
CACNB3-223ENST00000552480 USP19O94966 1318 aa16.69■□□□□ 0.26
CACNB3-223ENST00000552480 PXDNQ92626 1479 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms