RNA–Protein interactions for RNA: ENST00000552138.5

PACS2-214, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 765 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-214ENST00000552138 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
PACS2-214ENST00000552138 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
PACS2-214ENST00000552138 FNBP4Q8N3X1 1017 aaPredicted RBP20.09■□□□□ 0.81
PACS2-214ENST00000552138 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.81
PACS2-214ENST00000552138 SBNO2Q9Y2G9 1366 aa20.07■□□□□ 0.8
PACS2-214ENST00000552138 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
PACS2-214ENST00000552138 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
PACS2-214ENST00000552138 AKAP12Q02952 1782 aa20.05■□□□□ 0.8
PACS2-214ENST00000552138 ST20-MTHFSA0A0A6YYL1 179 aa20.04■□□□□ 0.8
PACS2-214ENST00000552138 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
PACS2-214ENST00000552138 ABTB2Q8N961 1025 aa20.04■□□□□ 0.8
PACS2-214ENST00000552138 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.02■□□□□ 0.8
PACS2-214ENST00000552138 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
PACS2-214ENST00000552138 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
PACS2-214ENST00000552138 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
PACS2-214ENST00000552138 BCL9LQ86UU0 1499 aa20■□□□□ 0.79
PACS2-214ENST00000552138 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
PACS2-214ENST00000552138 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
PACS2-214ENST00000552138 TMC1Q8TDI8 760 aa20■□□□□ 0.79
PACS2-214ENST00000552138 ZNF692Q9BU19 519 aaPredicted RBP20■□□□□ 0.79
PACS2-214ENST00000552138 SLC24A1O60721 1099 aa19.98■□□□□ 0.79
PACS2-214ENST00000552138 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
PACS2-214ENST00000552138 MON2Q7Z3U7 1717 aa19.97■□□□□ 0.79
PACS2-214ENST00000552138 NRKQ7Z2Y5 1582 aa19.97■□□□□ 0.79
PACS2-214ENST00000552138 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
PACS2-214ENST00000552138 TESK2Q96S53 571 aa19.97■□□□□ 0.79
PACS2-214ENST00000552138 SLIT2O94813 1529 aa19.97■□□□□ 0.79
PACS2-214ENST00000552138 BRD4O60885 1362 aaPredicted RBP19.96■□□□□ 0.79
PACS2-214ENST00000552138 USP47Q96K76 1375 aa19.96■□□□□ 0.79
PACS2-214ENST00000552138 ATRNO75882 1429 aa19.96■□□□□ 0.79
PACS2-214ENST00000552138 USP6P35125 1406 aa19.96■□□□□ 0.79
PACS2-214ENST00000552138 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
PACS2-214ENST00000552138 GJD4Q96KN9 370 aaPredicted RBP19.96■□□□□ 0.79
PACS2-214ENST00000552138 CCDC9Q9Y3X0 531 aaKnown RBP19.96■□□□□ 0.79
PACS2-214ENST00000552138 NLRP6P59044 892 aa19.95■□□□□ 0.78
PACS2-214ENST00000552138 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
PACS2-214ENST00000552138 BTG4Q9NY30 223 aa19.95■□□□□ 0.78
PACS2-214ENST00000552138 NRAPQ86VF7 1730 aa19.95■□□□□ 0.78
PACS2-214ENST00000552138 SSH2Q76I76 1423 aa19.94■□□□□ 0.78
PACS2-214ENST00000552138 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
PACS2-214ENST00000552138 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
PACS2-214ENST00000552138 KTN1Q86UP2 1357 aaKnown RBP19.94■□□□□ 0.78
PACS2-214ENST00000552138 PIK3C2AO00443 1686 aa19.94■□□□□ 0.78
PACS2-214ENST00000552138 CDK12Q9NYV4 1490 aaPredicted RBP19.93■□□□□ 0.78
PACS2-214ENST00000552138 COL14A1Q05707 1796 aaKnown RBP19.93■□□□□ 0.78
PACS2-214ENST00000552138 TMF1P82094 1093 aa19.92■□□□□ 0.78
PACS2-214ENST00000552138 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
PACS2-214ENST00000552138 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
PACS2-214ENST00000552138 TTC21BQ7Z4L5 1316 aa19.92■□□□□ 0.78
PACS2-214ENST00000552138 KIAA0232Q92628 1395 aa19.92■□□□□ 0.78
PACS2-214ENST00000552138 GCP02774 474 aa19.91■□□□□ 0.78
PACS2-214ENST00000552138 VPS72Q15906 364 aa19.91■□□□□ 0.78
PACS2-214ENST00000552138 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
PACS2-214ENST00000552138 CD163L1Q9NR16 1453 aa19.91■□□□□ 0.78
PACS2-214ENST00000552138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.9■□□□□ 0.78
PACS2-214ENST00000552138 TERF2IPQ9NYB0 399 aa19.9■□□□□ 0.78
PACS2-214ENST00000552138 RGS12O14924 1447 aa19.9■□□□□ 0.78
PACS2-214ENST00000552138 USP19O94966 1318 aa19.89■□□□□ 0.77
PACS2-214ENST00000552138 GLI3P10071 1580 aa19.88■□□□□ 0.77
PACS2-214ENST00000552138 TTC21AQ8NDW8 1320 aa19.88■□□□□ 0.77
PACS2-214ENST00000552138 ZBTB7CA1YPR0 619 aa19.88■□□□□ 0.77
PACS2-214ENST00000552138 USP54Q70EL1 1684 aa19.87■□□□□ 0.77
PACS2-214ENST00000552138 EVA1CP58658 441 aa19.86■□□□□ 0.77
PACS2-214ENST00000552138 CDCA8Q53HL2 280 aa19.86■□□□□ 0.77
PACS2-214ENST00000552138 STRN4Q9NRL3 753 aa19.86■□□□□ 0.77
PACS2-214ENST00000552138 SLIT3O75094 1523 aa19.86■□□□□ 0.77
PACS2-214ENST00000552138 LMO7Q8WWI1 1683 aa19.84■□□□□ 0.77
PACS2-214ENST00000552138 SOX12O15370 315 aa19.84■□□□□ 0.77
PACS2-214ENST00000552138 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
PACS2-214ENST00000552138 ZRANB1Q9UGI0 708 aa19.83■□□□□ 0.77
PACS2-214ENST00000552138 MYOM1P52179 1685 aa19.83■□□□□ 0.76
PACS2-214ENST00000552138 CPDO75976 1380 aa19.83■□□□□ 0.76
PACS2-214ENST00000552138 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.76
PACS2-214ENST00000552138 BRWD3Q6RI45 1802 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 A0A0G2JS52 829 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
PACS2-214ENST00000552138 MYT1Q01538 1121 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 NME9Q86XW9 330 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 SEPT12Q8IYM1 358 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 A0A1W2PP64 1363 aa19.82■□□□□ 0.76
PACS2-214ENST00000552138 FAM98CQ17RN3 349 aaKnown RBP19.81■□□□□ 0.76
PACS2-214ENST00000552138 COL18A1P39060 1754 aa19.8■□□□□ 0.76
PACS2-214ENST00000552138 SPATA31A5Q5VU36 1347 aa19.8■□□□□ 0.76
PACS2-214ENST00000552138 SPATA31A7Q8IWB4 1347 aa19.8■□□□□ 0.76
PACS2-214ENST00000552138 ONECUT3O60422 494 aaPredicted RBP19.8■□□□□ 0.76
PACS2-214ENST00000552138 EDC4Q6P2E9 1401 aaKnown RBP19.79■□□□□ 0.76
PACS2-214ENST00000552138 HSPA5P11021 654 aaKnown RBP19.79■□□□□ 0.76
PACS2-214ENST00000552138 USP35Q9P2H5 1018 aa19.79■□□□□ 0.76
PACS2-214ENST00000552138 POLR3GLQ9BT43 218 aa19.78■□□□□ 0.76
PACS2-214ENST00000552138 RGPD5Q99666 1765 aa19.78■□□□□ 0.76
PACS2-214ENST00000552138 LARP1Q6PKG0 1096 aaKnown RBP19.77■□□□□ 0.76
PACS2-214ENST00000552138 CAMTA1Q9Y6Y1 1673 aa19.77■□□□□ 0.76
PACS2-214ENST00000552138 NFAT5O94916 1531 aa19.76■□□□□ 0.75
PACS2-214ENST00000552138 USP31Q70CQ4 1352 aa19.76■□□□□ 0.75
PACS2-214ENST00000552138 ARHGEF25Q86VW2 580 aa19.76■□□□□ 0.75
PACS2-214ENST00000552138 SPATA31A1Q5TZJ5 1347 aa19.76■□□□□ 0.75
PACS2-214ENST00000552138 AATKQ6ZMQ8 1374 aa19.75■□□□□ 0.75
PACS2-214ENST00000552138 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
PACS2-214ENST00000552138 KRT27Q7Z3Y8 459 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms