RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
PPFIA2-226ENST00000552020 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
PPFIA2-226ENST00000552020 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
PPFIA2-226ENST00000552020 FUT2Q10981 343 aa9.28□□□□□ -0.92
PPFIA2-226ENST00000552020 LOC105371045A0A1W2PR82 267 aa9.26□□□□□ -0.93
PPFIA2-226ENST00000552020 SCRIBQ14160 1630 aa9.25□□□□□ -0.93
PPFIA2-226ENST00000552020 PER1O15534 1290 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-226ENST00000552020 RNF40O75150 1001 aa9.25□□□□□ -0.93
PPFIA2-226ENST00000552020 CFHP08603 1231 aa9.25□□□□□ -0.93
PPFIA2-226ENST00000552020 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
PPFIA2-226ENST00000552020 SEPT9Q9UHD8 586 aaPredicted RBP9.25□□□□□ -0.93
PPFIA2-226ENST00000552020 CCER1Q8TC90 406 aaPredicted RBP9.24□□□□□ -0.93
PPFIA2-226ENST00000552020 STK32AQ8WU08 396 aa9.24□□□□□ -0.93
PPFIA2-226ENST00000552020 GNEQ9Y223 722 aaKnown RBP9.24□□□□□ -0.93
PPFIA2-226ENST00000552020 HRO43593 1189 aa9.23□□□□□ -0.93
PPFIA2-226ENST00000552020 NR1H3Q13133 447 aa9.23□□□□□ -0.93
PPFIA2-226ENST00000552020 TMEM164Q5U3C3 297 aa9.23□□□□□ -0.93
PPFIA2-226ENST00000552020 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
PPFIA2-226ENST00000552020 PIK3CDO00329 1044 aa9.22□□□□□ -0.93
PPFIA2-226ENST00000552020 SKIP12755 728 aa9.22□□□□□ -0.93
PPFIA2-226ENST00000552020 ATP6V1AP38606 617 aa9.22□□□□□ -0.93
PPFIA2-226ENST00000552020 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
PPFIA2-226ENST00000552020 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
PPFIA2-226ENST00000552020 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
PPFIA2-226ENST00000552020 FBXO45P0C2W1 286 aa9.2□□□□□ -0.94
PPFIA2-226ENST00000552020 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
PPFIA2-226ENST00000552020 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
PPFIA2-226ENST00000552020 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
PPFIA2-226ENST00000552020 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
PPFIA2-226ENST00000552020 ZBBXA8MT70 800 aa9.18□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
PPFIA2-226ENST00000552020 KMT5BQ4FZB7 885 aa9.18□□□□□ -0.94
PPFIA2-226ENST00000552020 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
PPFIA2-226ENST00000552020 PTPN5P54829 565 aa9.17□□□□□ -0.94
PPFIA2-226ENST00000552020 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
PPFIA2-226ENST00000552020 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
PPFIA2-226ENST00000552020 UNCXA6NJT0 531 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L21D6R901 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 PUS10Q3MIT2 529 aaKnown RBP9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 TXNDC2Q86VQ3 553 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 NFATC2IPQ8NCF5 419 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 RABGEF1Q9UJ41 708 aa9.16□□□□□ -0.94
PPFIA2-226ENST00000552020 ARID4AP29374 1257 aaPredicted RBP9.15□□□□□ -0.94
PPFIA2-226ENST00000552020 FAM98CQ17RN3 349 aaKnown RBP9.15□□□□□ -0.94
PPFIA2-226ENST00000552020 Q3C1V9 767 aa9.15□□□□□ -0.94
PPFIA2-226ENST00000552020 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.94
PPFIA2-226ENST00000552020 FKBPLQ9UIM3 349 aa9.15□□□□□ -0.94
PPFIA2-226ENST00000552020 DESI1Q6ICB0 168 aa9.14□□□□□ -0.95
PPFIA2-226ENST00000552020 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
PPFIA2-226ENST00000552020 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
PPFIA2-226ENST00000552020 FAM196BA6NMK8 535 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 RASA1P20936 1047 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 CRTC2Q53ET0 693 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 PHLDB3Q6NSJ2 640 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 FAM174AQ8TBP5 190 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 SLC27A5Q9Y2P5 690 aa9.13□□□□□ -0.95
PPFIA2-226ENST00000552020 RBM47A0AV96 593 aaKnown RBP9.12□□□□□ -0.95
PPFIA2-226ENST00000552020 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
PPFIA2-226ENST00000552020 MORN1Q5T089 497 aa9.12□□□□□ -0.95
PPFIA2-226ENST00000552020 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
PPFIA2-226ENST00000552020 SSFA2P28290 1259 aa9.11□□□□□ -0.95
PPFIA2-226ENST00000552020 NCOA4Q13772 614 aa9.11□□□□□ -0.95
PPFIA2-226ENST00000552020 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
PPFIA2-226ENST00000552020 ATP2B4P23634 1241 aa9.1□□□□□ -0.95
PPFIA2-226ENST00000552020 CTHP32929 405 aa9.1□□□□□ -0.95
PPFIA2-226ENST00000552020 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
PPFIA2-226ENST00000552020 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
PPFIA2-226ENST00000552020 MAP10Q9P2G4 905 aa9.1□□□□□ -0.95
PPFIA2-226ENST00000552020 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 ATP5J2-PTCD1G3V325 749 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 ERCC3P19447 782 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 SERPINB4P48594 390 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 MRRFQ96E11 262 aaKnown RBP9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 PCDHB9Q9Y5E1 797 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 NESP48681 1621 aa9.09□□□□□ -0.95
PPFIA2-226ENST00000552020 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-226ENST00000552020 PTK7Q13308 1070 aa9.08□□□□□ -0.96
PPFIA2-226ENST00000552020 CLP1Q92989 425 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-226ENST00000552020 WNT2BQ93097 391 aa9.08□□□□□ -0.96
PPFIA2-226ENST00000552020 USB1Q9BQ65 265 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-226ENST00000552020 BCL2L13Q9BXK5 485 aa9.08□□□□□ -0.96
PPFIA2-226ENST00000552020 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms