RNA–Protein interactions for RNA: ENST00000551987.1

TMPO-210, Transcript of thymopoietin, human

TSL 2

Gene TMPO, Length 727 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-210	ENST00000551987	QPCT	Q16769	361 aa		11.97	□□□□□ -0.49
TMPO-210	ENST00000551987	SIAH2	O43255	324 aa		11.95	□□□□□ -0.5
TMPO-210	ENST00000551987	GMPR2	Q9P2T1	348 aa	Known RBP	11.95	□□□□□ -0.5
TMPO-210	ENST00000551987	ZNF511	Q8NB15	262 aa		11.94	□□□□□ -0.5
TMPO-210	ENST00000551987	MAP10	Q9P2G4	905 aa		11.94	□□□□□ -0.5
TMPO-210	ENST00000551987	POLR3E	Q9NVU0	708 aa		11.93	□□□□□ -0.5
TMPO-210	ENST00000551987	PER1	O15534	1290 aa	Predicted RBP	11.92	□□□□□ -0.5
TMPO-210	ENST00000551987	LILRB3	O75022	631 aa		11.92	□□□□□ -0.5
TMPO-210	ENST00000551987	CLK2	P49760	499 aa	Known RBP	11.92	□□□□□ -0.5
TMPO-210	ENST00000551987	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.92	□□□□□ -0.5
TMPO-210	ENST00000551987	WASF2	Q9Y6W5	498 aa		11.92	□□□□□ -0.5
TMPO-210	ENST00000551987	TUSC1	Q2TAM9	212 aa		11.91	□□□□□ -0.5
TMPO-210	ENST00000551987	RSPH6A	Q9H0K4	717 aa		11.91	□□□□□ -0.5
TMPO-210	ENST00000551987	C11orf95	C9JLR9	678 aa	Predicted RBP	11.9	□□□□□ -0.5
TMPO-210	ENST00000551987	F12	P00748	615 aa	Predicted RBP	11.9	□□□□□ -0.5
TMPO-210	ENST00000551987	RTL5	Q5HYW3	569 aa	Predicted RBP	11.9	□□□□□ -0.5
TMPO-210	ENST00000551987	ATP13A2	Q9NQ11	1180 aa		11.9	□□□□□ -0.5
TMPO-210	ENST00000551987	TLL2	Q9Y6L7	1015 aa		11.9	□□□□□ -0.5
TMPO-210	ENST00000551987	KDM4C	Q9H3R0	1056 aa		11.88	□□□□□ -0.51
TMPO-210	ENST00000551987	VARS	P26640	1264 aa	Known RBP	11.87	□□□□□ -0.51
TMPO-210	ENST00000551987	HELB	Q8NG08	1087 aa	Predicted RBP	11.86	□□□□□ -0.51
TMPO-210	ENST00000551987	FOXJ1	Q92949	421 aa		11.85	□□□□□ -0.51
TMPO-210	ENST00000551987	AGER	Q15109	404 aa		11.84	□□□□□ -0.51
TMPO-210	ENST00000551987	FAM117A	Q9C073	453 aa		11.84	□□□□□ -0.51
TMPO-210	ENST00000551987	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.84	□□□□□ -0.51
TMPO-210	ENST00000551987	PLEKHG3	A1L390	1219 aa		11.83	□□□□□ -0.52
TMPO-210	ENST00000551987	CAPN5	O15484	640 aa	Predicted RBP	11.81	□□□□□ -0.52
TMPO-210	ENST00000551987	SNRPB	P14678	240 aa	Known RBP	11.81	□□□□□ -0.52
TMPO-210	ENST00000551987	SKIV2L	Q15477	1246 aa	Known RBP	11.81	□□□□□ -0.52
TMPO-210	ENST00000551987	FAM174A	Q8TBP5	190 aa		11.81	□□□□□ -0.52
TMPO-210	ENST00000551987	DDRGK1	Q96HY6	314 aa		11.81	□□□□□ -0.52
TMPO-210	ENST00000551987	NNT	Q13423	1086 aa		11.8	□□□□□ -0.52
TMPO-210	ENST00000551987	ARID5B	Q14865	1188 aa		11.8	□□□□□ -0.52
TMPO-210	ENST00000551987	SENP2	Q9HC62	589 aa		11.8	□□□□□ -0.52
TMPO-210	ENST00000551987	BMP1	P13497	986 aa		11.79	□□□□□ -0.52
TMPO-210	ENST00000551987	CTDSPL2	Q05D32	466 aa		11.79	□□□□□ -0.52
TMPO-210	ENST00000551987	SH3D19	Q5HYK7	790 aa		11.79	□□□□□ -0.52
TMPO-210	ENST00000551987	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.79	□□□□□ -0.52
TMPO-210	ENST00000551987	TRIM47	Q96LD4	638 aa		11.79	□□□□□ -0.52
TMPO-210	ENST00000551987	C4orf48	Q5BLP8	95 aa		11.78	□□□□□ -0.52
TMPO-210	ENST00000551987	BPHL	Q86WA6	291 aa	Predicted RBP	11.78	□□□□□ -0.52
TMPO-210	ENST00000551987	MPND	Q8N594	471 aa		11.78	□□□□□ -0.52
TMPO-210	ENST00000551987	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.77	□□□□□ -0.53
TMPO-210	ENST00000551987	ARMC2	Q8NEN0	867 aa		11.77	□□□□□ -0.53
TMPO-210	ENST00000551987	KIFC2	Q96AC6	838 aa		11.76	□□□□□ -0.53
TMPO-210	ENST00000551987	ADH1C	P00326	375 aa		11.75	□□□□□ -0.53
TMPO-210	ENST00000551987	NBPF14	Q5TI25	921 aa		11.74	□□□□□ -0.53
TMPO-210	ENST00000551987	TREML4	Q6UXN2	200 aa		11.74	□□□□□ -0.53
TMPO-210	ENST00000551987	TRIM46	Q7Z4K8	759 aa		11.74	□□□□□ -0.53
TMPO-210	ENST00000551987	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
TMPO-210	ENST00000551987	WDR4	P57081	412 aa	Known RBP	11.73	□□□□□ -0.53
TMPO-210	ENST00000551987	LRRN4	Q8WUT4	740 aa		11.73	□□□□□ -0.53
TMPO-210	ENST00000551987	CDK15	Q96Q40	435 aa		11.73	□□□□□ -0.53
TMPO-210	ENST00000551987	MAGEB6P1	A0A0J9YX57	407 aa		11.72	□□□□□ -0.53
TMPO-210	ENST00000551987	TIMP2	P16035	220 aa		11.7	□□□□□ -0.54
TMPO-210	ENST00000551987	SH3BP5L	Q7L8J4	393 aa		11.7	□□□□□ -0.54
TMPO-210	ENST00000551987	SH3RF1	Q7Z6J0	888 aa		11.7	□□□□□ -0.54
TMPO-210	ENST00000551987	CARD14	Q9BXL6	1004 aa		11.7	□□□□□ -0.54
TMPO-210	ENST00000551987	AP1G2	O75843	785 aa		11.69	□□□□□ -0.54
TMPO-210	ENST00000551987	WFS1	O76024	890 aa		11.69	□□□□□ -0.54
TMPO-210	ENST00000551987	NR3C2	P08235	984 aa		11.68	□□□□□ -0.54
TMPO-210	ENST00000551987	GRM5	P41594	1212 aa		11.68	□□□□□ -0.54
TMPO-210	ENST00000551987	NR5A1	Q13285	461 aa		11.68	□□□□□ -0.54
TMPO-210	ENST00000551987	LCE2A	Q5TA79	106 aa	Predicted RBP	11.68	□□□□□ -0.54
TMPO-210	ENST00000551987	PPP2R2D	Q66LE6	453 aa		11.68	□□□□□ -0.54
TMPO-210	ENST00000551987	ZIC2	O95409	532 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-210	ENST00000551987	NR6A1	Q15406	480 aa		11.67	□□□□□ -0.54
TMPO-210	ENST00000551987	ZFP42	Q96MM3	310 aa		11.67	□□□□□ -0.54
TMPO-210	ENST00000551987	C1QTNF2	Q9BXJ5	285 aa		11.67	□□□□□ -0.54
TMPO-210	ENST00000551987	KLF16	Q9BXK1	252 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-210	ENST00000551987	NFX1	Q12986	1120 aa	Known RBP	11.66	□□□□□ -0.54
TMPO-210	ENST00000551987	NEUROD2	Q15784	382 aa		11.66	□□□□□ -0.54
TMPO-210	ENST00000551987	MRPL14	Q6P1L8	145 aa	Known RBP	11.66	□□□□□ -0.54
TMPO-210	ENST00000551987	VASH1	Q7L8A9	365 aa	Predicted RBP	11.66	□□□□□ -0.54
TMPO-210	ENST00000551987	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.66	□□□□□ -0.54	2e-7	■□□□□ 10.9
TMPO-210	ENST00000551987	FSHR	P23945	695 aa		11.65	□□□□□ -0.54
TMPO-210	ENST00000551987	ITPKC	Q96DU7	683 aa		11.65	□□□□□ -0.54
TMPO-210	ENST00000551987	PURB	Q96QR8	312 aa	Known RBP	11.65	□□□□□ -0.54
TMPO-210	ENST00000551987	ZFAND3	Q9H8U3	227 aa		11.65	□□□□□ -0.54
TMPO-210	ENST00000551987	FKBPL	Q9UIM3	349 aa		11.65	□□□□□ -0.54
TMPO-210	ENST00000551987	TERT	O14746	1132 aa	Known RBP	11.63	□□□□□ -0.55
TMPO-210	ENST00000551987	SCARF1	Q14162	830 aa		11.63	□□□□□ -0.55
TMPO-210	ENST00000551987	TRMT44	Q8IYL2	757 aa	Known RBP	11.63	□□□□□ -0.55
TMPO-210	ENST00000551987	ARHGAP9	Q9BRR9	750 aa		11.63	□□□□□ -0.55
TMPO-210	ENST00000551987	ERFE	Q4G0M1	354 aa		11.62	□□□□□ -0.55
TMPO-210	ENST00000551987	PDXDC2P	Q6P474	469 aa		11.62	□□□□□ -0.55
TMPO-210	ENST00000551987	IL27	Q8NEV9	243 aa		11.62	□□□□□ -0.55
TMPO-210	ENST00000551987	MAP4K5	Q9Y4K4	846 aa		11.62	□□□□□ -0.55
TMPO-210	ENST00000551987	USP17L8	P0C7I0	530 aa		11.6	□□□□□ -0.55
TMPO-210	ENST00000551987	RFC5	P40937	340 aa		11.6	□□□□□ -0.55
TMPO-210	ENST00000551987	EPS8L1	Q8TE68	723 aa		11.6	□□□□□ -0.55
TMPO-210	ENST00000551987	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.6	□□□□□ -0.55
TMPO-210	ENST00000551987	HMX1	Q9NP08	348 aa	Predicted RBP	11.6	□□□□□ -0.55
TMPO-210	ENST00000551987	C6orf118	Q5T5N4	469 aa		11.59	□□□□□ -0.55
TMPO-210	ENST00000551987	ZBTB33	Q86T24	672 aa		11.58	□□□□□ -0.56
TMPO-210	ENST00000551987	CCDC116	Q8IYX3	515 aa		11.57	□□□□□ -0.56
TMPO-210	ENST00000551987	SLC10A4	Q96EP9	437 aa		11.57	□□□□□ -0.56
TMPO-210	ENST00000551987	NXF1	Q9UBU9	619 aa	Known RBP	11.57	□□□□□ -0.56
TMPO-210	ENST00000551987	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.57	□□□□□ -0.56
TMPO-210	ENST00000551987	SOBP	A7XYQ1	873 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms