RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 TRAK2O60296 914 aa23.17■■□□□ 1.3
APAF1-210ENST00000551964 XBP1P17861 261 aa23.17■■□□□ 1.3
APAF1-210ENST00000551964 MEX3CQ5U5Q3 659 aaKnown RBP23.17■■□□□ 1.3
APAF1-210ENST00000551964 OLFM4Q6UX06 510 aa23.17■■□□□ 1.3
APAF1-210ENST00000551964 SETQ01105 290 aaPredicted RBP23.17■■□□□ 1.3
APAF1-210ENST00000551964 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
APAF1-210ENST00000551964 CDK19Q9BWU1 502 aa23.16■■□□□ 1.3
APAF1-210ENST00000551964 MBD3O95983 291 aa23.16■■□□□ 1.3
APAF1-210ENST00000551964 FAM13BQ9NYF5 915 aa23.16■■□□□ 1.3
APAF1-210ENST00000551964 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
APAF1-210ENST00000551964 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
APAF1-210ENST00000551964 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
APAF1-210ENST00000551964 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
APAF1-210ENST00000551964 AKNAQ7Z591 1439 aa23.15■■□□□ 1.3
APAF1-210ENST00000551964 SDF4Q9BRK5 362 aa23.15■■□□□ 1.3
APAF1-210ENST00000551964 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
APAF1-210ENST00000551964 DNAJC2Q99543 621 aaKnown RBP23.15■■□□□ 1.3
APAF1-210ENST00000551964 FYB1O15117 783 aa23.15■■□□□ 1.3
APAF1-210ENST00000551964 SLC4A2P04920 1241 aa23.14■■□□□ 1.3
APAF1-210ENST00000551964 ZNF771Q7L3S4 317 aaPredicted RBP23.14■■□□□ 1.3
APAF1-210ENST00000551964 TIAM1Q13009 1591 aa23.14■■□□□ 1.3
APAF1-210ENST00000551964 CCT4P50991 539 aaKnown RBP23.14■■□□□ 1.29
APAF1-210ENST00000551964 ANO8Q9HCE9 1232 aaPredicted RBP23.14■■□□□ 1.29
APAF1-210ENST00000551964 PDCP20941 246 aa23.13■■□□□ 1.29
APAF1-210ENST00000551964 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
APAF1-210ENST00000551964 SART3Q15020 963 aaKnown RBP23.13■■□□□ 1.29
APAF1-210ENST00000551964 TEX35Q5T0J7 233 aa23.13■■□□□ 1.29
APAF1-210ENST00000551964 SULT6B1Q6IMI4 303 aa23.13■■□□□ 1.29
APAF1-210ENST00000551964 DAPK1P53355 1430 aa23.12■■□□□ 1.29
APAF1-210ENST00000551964 CCDC43Q96MW1 224 aaKnown RBP23.12■■□□□ 1.29
APAF1-210ENST00000551964 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
APAF1-210ENST00000551964 CAVIN1Q6NZI2 390 aaKnown RBP23.12■■□□□ 1.29
APAF1-210ENST00000551964 MNS1Q8NEH6 495 aa23.12■■□□□ 1.29
APAF1-210ENST00000551964 KIF6Q6ZMV9 814 aa23.11■■□□□ 1.29
APAF1-210ENST00000551964 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
APAF1-210ENST00000551964 HDGFL1Q5TGJ6 251 aa23.11■■□□□ 1.29
APAF1-210ENST00000551964 RNF214Q8ND24 703 aa23.11■■□□□ 1.29
APAF1-210ENST00000551964 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
APAF1-210ENST00000551964 SLC52A1Q9NWF4 448 aa23.11■■□□□ 1.29
APAF1-210ENST00000551964 ARGLU1Q9NWB6 273 aaPredicted RBP23.1■■□□□ 1.29
APAF1-210ENST00000551964 ATF7IPQ6VMQ6 1270 aa23.1■■□□□ 1.29
APAF1-210ENST00000551964 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
APAF1-210ENST00000551964 PRPF40AO75400 957 aaKnown RBP23.09■■□□□ 1.29
APAF1-210ENST00000551964 TATP17735 454 aaPredicted RBP23.08■■□□□ 1.29
APAF1-210ENST00000551964 LRRCC1Q9C099 1032 aa23.08■■□□□ 1.29
APAF1-210ENST00000551964 TSPY26PQ9H489 355 aa23.08■■□□□ 1.29
APAF1-210ENST00000551964 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.28
APAF1-210ENST00000551964 KINO60870 393 aaKnown RBP23.07■■□□□ 1.28
APAF1-210ENST00000551964 BACH2Q9BYV9 841 aa23.07■■□□□ 1.28
APAF1-210ENST00000551964 NAP1L1P55209 391 aaKnown RBP23.07■■□□□ 1.28
APAF1-210ENST00000551964 VSIG10Q8N0Z9 540 aa23.07■■□□□ 1.28
APAF1-210ENST00000551964 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
APAF1-210ENST00000551964 CWC22Q9HCG8 908 aaKnown RBP23.06■■□□□ 1.28
APAF1-210ENST00000551964 SUPT6HQ7KZ85 1726 aaKnown RBP23.06■■□□□ 1.28
APAF1-210ENST00000551964 PROSER2Q86WR7 435 aaPredicted RBP23.06■■□□□ 1.28
APAF1-210ENST00000551964 SRCIN1Q9C0H9 1055 aa23.06■■□□□ 1.28
APAF1-210ENST00000551964 ZNF396Q96N95 335 aaPredicted RBP23.06■■□□□ 1.28
APAF1-210ENST00000551964 PDILTQ8N807 584 aa23.05■■□□□ 1.28
APAF1-210ENST00000551964 CCDC158Q5M9N0 1113 aa23.05■■□□□ 1.28
APAF1-210ENST00000551964 TRIM5Q9C035 493 aa23.05■■□□□ 1.28
APAF1-210ENST00000551964 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
APAF1-210ENST00000551964 RBM42Q9BTD8 480 aaKnown RBP23.04■■□□□ 1.28
APAF1-210ENST00000551964 TTC39AQ5SRH9 613 aa23.04■■□□□ 1.28
APAF1-210ENST00000551964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
APAF1-210ENST00000551964 ACBD3Q9H3P7 528 aa23.04■■□□□ 1.28
APAF1-210ENST00000551964 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
APAF1-210ENST00000551964 THEMISQ8N1K5 641 aaPredicted RBP23.04■■□□□ 1.28
APAF1-210ENST00000551964 CYP46A1Q9Y6A2 500 aa23.03■■□□□ 1.28
APAF1-210ENST00000551964 ATAD2Q6PL18 1390 aa23.03■■□□□ 1.28
APAF1-210ENST00000551964 KDM4AO75164 1064 aa23.03■■□□□ 1.28
APAF1-210ENST00000551964 R3HCC1Q9Y3T6 440 aaKnown RBP23.03■■□□□ 1.28
APAF1-210ENST00000551964 RUFY1Q96T51 708 aa23.02■■□□□ 1.28
APAF1-210ENST00000551964 NESP48681 1621 aa23.02■■□□□ 1.28
APAF1-210ENST00000551964 CHD1LQ86WJ1 897 aa23.02■■□□□ 1.28
APAF1-210ENST00000551964 FIBPO43427 364 aa23.02■■□□□ 1.28
APAF1-210ENST00000551964 SLC3A2P08195 630 aaKnown RBP23.02■■□□□ 1.28
APAF1-210ENST00000551964 FAM177BA6PVY3 158 aa23.02■■□□□ 1.28
APAF1-210ENST00000551964 ZNF530Q6P9A1 599 aaPredicted RBP23.02■■□□□ 1.28
APAF1-210ENST00000551964 ANKRD1Q15327 319 aa23.01■■□□□ 1.27
APAF1-210ENST00000551964 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
APAF1-210ENST00000551964 AK7Q96M32 723 aa23.01■■□□□ 1.27
APAF1-210ENST00000551964 CNNM1Q9NRU3 951 aa23.01■■□□□ 1.27
APAF1-210ENST00000551964 K7ELQ4 463 aaPredicted RBP23.01■■□□□ 1.27
APAF1-210ENST00000551964 SAMD1Q6SPF0 538 aaPredicted RBP23.01■■□□□ 1.27
APAF1-210ENST00000551964 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.01■■□□□ 1.272e-6■■■■□ 25.5
APAF1-210ENST00000551964 MTMR7Q9Y216 660 aa23.01■■□□□ 1.27
APAF1-210ENST00000551964 AEBP1Q8IUX7 1158 aa23.01■■□□□ 1.27
APAF1-210ENST00000551964 EPS15P42566 896 aa23■■□□□ 1.27
APAF1-210ENST00000551964 WDR97A6NE52 1622 aa23■■□□□ 1.27
APAF1-210ENST00000551964 FCHSD2O94868 740 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 STK38Q15208 465 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 CABP4P57796 275 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 CCDC173Q0VFZ6 552 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 SMC2O95347 1197 aa22.99■■□□□ 1.27
APAF1-210ENST00000551964 OFD1O75665 1012 aa22.98■■□□□ 1.27
APAF1-210ENST00000551964 ATP2B1P20020 1258 aa22.98■■□□□ 1.27
APAF1-210ENST00000551964 CDR1P51861 262 aa22.98■■□□□ 1.27
APAF1-210ENST00000551964 SPG7Q9UQ90 795 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms