RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 TRIM35Q9UPQ4 493 aa29.96■■■□□ 2.39
NPAS3-211ENST00000551634 TSR2Q969E8 191 aaKnown RBP29.95■■■□□ 2.39
NPAS3-211ENST00000551634 ANKRD26Q9UPS8 1709 aa29.95■■■□□ 2.39
NPAS3-211ENST00000551634 TRIM27P14373 513 aa29.95■■■□□ 2.38
NPAS3-211ENST00000551634 ATAD2Q6PL18 1390 aa29.95■■■□□ 2.38
NPAS3-211ENST00000551634 ATF7IPQ6VMQ6 1270 aa29.94■■■□□ 2.38
NPAS3-211ENST00000551634 U2SURPO15042 1029 aaKnown RBP29.93■■■□□ 2.38
NPAS3-211ENST00000551634 SSH1Q8WYL5 1049 aa29.93■■■□□ 2.38
NPAS3-211ENST00000551634 POGKQ9P215 609 aa29.93■■■□□ 2.38
NPAS3-211ENST00000551634 PNNQ9H307 717 aaKnown RBP29.92■■■□□ 2.38
NPAS3-211ENST00000551634 ANO8Q9HCE9 1232 aaPredicted RBP29.92■■■□□ 2.38
NPAS3-211ENST00000551634 TERF2IPQ9NYB0 399 aa29.92■■■□□ 2.38
NPAS3-211ENST00000551634 SMC5Q8IY18 1101 aa29.91■■■□□ 2.38
NPAS3-211ENST00000551634 NUTM2DQ5VT03 806 aaPredicted RBP29.9■■■□□ 2.38
NPAS3-211ENST00000551634 SLC52A1Q9NWF4 448 aa29.9■■■□□ 2.38
NPAS3-211ENST00000551634 SRPK2P78362 688 aaKnown RBP29.89■■■□□ 2.38
NPAS3-211ENST00000551634 FAM69CQ0P6D2 419 aa29.89■■■□□ 2.38
NPAS3-211ENST00000551634 C22orf23Q9BZE7 217 aa29.89■■■□□ 2.38
NPAS3-211ENST00000551634 GGNBP2Q9H3C7 697 aa29.89■■■□□ 2.38
NPAS3-211ENST00000551634 NEO1Q92859 1461 aa29.88■■■□□ 2.37
NPAS3-211ENST00000551634 CLTCQ00610 1675 aaKnown RBP29.88■■■□□ 2.37
NPAS3-211ENST00000551634 ITPRIPQ8IWB1 547 aa29.88■■■□□ 2.37
NPAS3-211ENST00000551634 KIF16BQ96L93 1317 aa29.88■■■□□ 2.37
NPAS3-211ENST00000551634 L1TD1Q5T7N2 865 aaKnown RBP29.87■■■□□ 2.37
NPAS3-211ENST00000551634 FYB1O15117 783 aa29.87■■■□□ 2.37
NPAS3-211ENST00000551634 IPO8O15397 1037 aaKnown RBP29.87■■■□□ 2.37
NPAS3-211ENST00000551634 IDI1Q13907 227 aa29.87■■■□□ 2.37
NPAS3-211ENST00000551634 PTPRMP28827 1452 aa29.86■■■□□ 2.37
NPAS3-211ENST00000551634 FAM43AQ8N2R8 423 aa29.86■■■□□ 2.37
NPAS3-211ENST00000551634 PNPLA6Q8IY17 1366 aa29.86■■■□□ 2.37
NPAS3-211ENST00000551634 NOB1Q9ULX3 412 aaKnown RBP29.85■■■□□ 2.37
NPAS3-211ENST00000551634 DIP2CQ9Y2E4 1556 aa29.85■■■□□ 2.37
NPAS3-211ENST00000551634 SAFB2Q14151 953 aaKnown RBP eCLIP29.85■■■□□ 2.37
NPAS3-211ENST00000551634 ALDH1L2Q3SY69 923 aa29.84■■■□□ 2.37
NPAS3-211ENST00000551634 ZBTB40Q9NUA8 1239 aa29.84■■■□□ 2.37
NPAS3-211ENST00000551634 RIPK4P57078 832 aa29.84■■■□□ 2.37
NPAS3-211ENST00000551634 CD163L1Q9NR16 1453 aa29.84■■■□□ 2.37
NPAS3-211ENST00000551634 DIAPH1O60610 1272 aaKnown RBP29.83■■■□□ 2.37
NPAS3-211ENST00000551634 TMEM57Q8N5G2 664 aa29.81■■■□□ 2.36
NPAS3-211ENST00000551634 CHMP5Q9NZZ3 219 aa29.81■■■□□ 2.36
NPAS3-211ENST00000551634 STK26Q9P289 416 aa29.81■■■□□ 2.36
NPAS3-211ENST00000551634 ZNF428Q96B54 188 aa29.8■■■□□ 2.36
NPAS3-211ENST00000551634 CDC42BPGQ6DT37 1551 aa29.8■■■□□ 2.36
NPAS3-211ENST00000551634 MFAP1P55081 439 aaKnown RBP29.8■■■□□ 2.36
NPAS3-211ENST00000551634 BRPF1P55201 1214 aaPredicted RBP29.79■■■□□ 2.36
NPAS3-211ENST00000551634 HDGFL2Q7Z4V5 671 aaPredicted RBP29.79■■■□□ 2.36
NPAS3-211ENST00000551634 MCM4P33991 863 aa29.78■■■□□ 2.36
NPAS3-211ENST00000551634 YTHDC2Q9H6S0 1430 aaKnown RBP29.78■■■□□ 2.36
NPAS3-211ENST00000551634 FCHSD2O94868 740 aa29.78■■■□□ 2.36
NPAS3-211ENST00000551634 TMEM131LA2VDJ0 1609 aa29.77■■■□□ 2.36
NPAS3-211ENST00000551634 PRAM1Q96QH2 718 aa29.76■■■□□ 2.35
NPAS3-211ENST00000551634 NUCB1Q02818 461 aa29.75■■■□□ 2.35
NPAS3-211ENST00000551634 MINK1Q8N4C8 1332 aaPredicted RBP29.75■■■□□ 2.35
NPAS3-211ENST00000551634 RAPGEF3O95398 923 aa29.75■■■□□ 2.35
NPAS3-211ENST00000551634 PPIP5K1Q6PFW1 1433 aa29.75■■■□□ 2.35
NPAS3-211ENST00000551634 MYO5BQ9ULV0 1848 aa29.75■■■□□ 2.35
NPAS3-211ENST00000551634 KIF20BQ96Q89 1820 aa29.74■■■□□ 2.35
NPAS3-211ENST00000551634 RBM25P49756 843 aaKnown RBP29.73■■■□□ 2.35
NPAS3-211ENST00000551634 CHMP4BQ9H444 224 aaKnown RBP29.73■■■□□ 2.35
NPAS3-211ENST00000551634 PREX1Q8TCU6 1659 aa29.72■■■□□ 2.35
NPAS3-211ENST00000551634 HSCBQ8IWL3 235 aa29.72■■■□□ 2.35
NPAS3-211ENST00000551634 ARHGEF40Q8TER5 1519 aa29.71■■■□□ 2.35
NPAS3-211ENST00000551634 FAM135BQ49AJ0 1406 aa29.7■■■□□ 2.34
NPAS3-211ENST00000551634 LRRC7Q96NW7 1537 aa29.7■■■□□ 2.34
NPAS3-211ENST00000551634 SNX21Q969T3 373 aa29.69■■■□□ 2.34
NPAS3-211ENST00000551634 RICTORQ6R327 1708 aa29.68■■■□□ 2.34
NPAS3-211ENST00000551634 NCOA3Q9Y6Q9 1424 aa29.68■■■□□ 2.34
NPAS3-211ENST00000551634 CHD1LQ86WJ1 897 aa29.68■■■□□ 2.34
NPAS3-211ENST00000551634 CDK19Q9BWU1 502 aa29.68■■■□□ 2.34
NPAS3-211ENST00000551634 FSD2A1L4K1 749 aa29.67■■■□□ 2.34
NPAS3-211ENST00000551634 SPRYD3Q8NCJ5 442 aa29.67■■■□□ 2.34
NPAS3-211ENST00000551634 ARHGAP45Q92619 1136 aa29.67■■■□□ 2.34
NPAS3-211ENST00000551634 RSPH6AQ9H0K4 717 aa29.67■■■□□ 2.34
NPAS3-211ENST00000551634 CALD1Q05682 793 aaKnown RBP29.66■■■□□ 2.34
NPAS3-211ENST00000551634 ALKQ9UM73 1620 aa29.66■■■□□ 2.34
NPAS3-211ENST00000551634 GOLGA6L3A6NEY3 463 aa29.65■■■□□ 2.34
NPAS3-211ENST00000551634 BMP2KLQ5H9B9 411 aa29.65■■■□□ 2.34
NPAS3-211ENST00000551634 PIK3R4Q99570 1358 aa29.65■■■□□ 2.34
NPAS3-211ENST00000551634 GCC1Q96CN9 775 aa29.65■■■□□ 2.34
NPAS3-211ENST00000551634 CABP1Q9NZU7 370 aa29.65■■■□□ 2.34
NPAS3-211ENST00000551634 ZNF692Q9BU19 519 aaPredicted RBP29.64■■■□□ 2.34
NPAS3-211ENST00000551634 TSPOAP1O95153 1857 aa29.63■■■□□ 2.33
NPAS3-211ENST00000551634 PRKAR2BP31323 418 aa29.63■■■□□ 2.33
NPAS3-211ENST00000551634 LNPKQ9C0E8 428 aa29.63■■■□□ 2.33
NPAS3-211ENST00000551634 ATP7BP35670 1465 aa29.63■■■□□ 2.33
NPAS3-211ENST00000551634 DDX11L8A8MPP1 907 aa29.62■■■□□ 2.33
NPAS3-211ENST00000551634 PTCH1Q13635 1447 aa29.62■■■□□ 2.33
NPAS3-211ENST00000551634 DDIT3P35638 169 aa29.62■■■□□ 2.33
NPAS3-211ENST00000551634 NFE2L2Q16236 605 aa29.62■■■□□ 2.33
NPAS3-211ENST00000551634 ZBTB7BO15156 539 aaPredicted RBP29.61■■■□□ 2.33
NPAS3-211ENST00000551634 POLKQ9UBT6 870 aa29.61■■■□□ 2.33
NPAS3-211ENST00000551634 TRAK2O60296 914 aa29.61■■■□□ 2.33
NPAS3-211ENST00000551634 CIZ1Q9ULV3 898 aaPredicted RBP29.6■■■□□ 2.33
NPAS3-211ENST00000551634 DLC1Q96QB1 1528 aa29.6■■■□□ 2.33
NPAS3-211ENST00000551634 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.59■■■□□ 2.33
NPAS3-211ENST00000551634 VAMP4O75379 141 aa29.59■■■□□ 2.33
NPAS3-211ENST00000551634 MRPL50Q8N5N7 158 aaKnown RBP29.59■■■□□ 2.33
NPAS3-211ENST00000551634 YEATS2Q9ULM3 1422 aa29.59■■■□□ 2.33
NPAS3-211ENST00000551634 XRCC6P12956 609 aaKnown RBP eCLIP29.58■■■□□ 2.33
NPAS3-211ENST00000551634 GNAI1P63096 354 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms