RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	RALGAPB	Q86X10	1494 aa		13.8	□□□□□ -0.2
PFKM-222	ENST00000551339	ROCK2	O75116	1388 aa	Known RBP	13.8	□□□□□ -0.2
PFKM-222	ENST00000551339	SRCAP	Q6ZRS2	3230 aa		13.79	□□□□□ -0.2
PFKM-222	ENST00000551339	TRPM1	Q7Z4N2	1603 aa		13.79	□□□□□ -0.2
PFKM-222	ENST00000551339	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.79	□□□□□ -0.2
PFKM-222	ENST00000551339	ONECUT3	O60422	494 aa	Predicted RBP	13.79	□□□□□ -0.2
PFKM-222	ENST00000551339	CLSPN	Q9HAW4	1339 aa		13.79	□□□□□ -0.2
PFKM-222	ENST00000551339	ITSN1	Q15811	1721 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	ABCA3	Q99758	1704 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	NUTM2G	Q5VZR2	741 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	BTG4	Q9NY30	223 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	CABP1	Q9NZU7	370 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	ATAD2	Q6PL18	1390 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	PPIP5K1	Q6PFW1	1433 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	GLI3	P10071	1580 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	TOPAZ1	Q8N9V7	1692 aa		13.78	□□□□□ -0.2
PFKM-222	ENST00000551339	EVC2	Q86UK5	1308 aa		13.77	□□□□□ -0.21
PFKM-222	ENST00000551339	TONSL	Q96HA7	1378 aa		13.77	□□□□□ -0.21
PFKM-222	ENST00000551339	SEPT12	Q8IYM1	358 aa		13.76	□□□□□ -0.21
PFKM-222	ENST00000551339	ABTB2	Q8N961	1025 aa		13.76	□□□□□ -0.21
PFKM-222	ENST00000551339	CCDC9	Q9Y3X0	531 aa	Known RBP	13.76	□□□□□ -0.21
PFKM-222	ENST00000551339	NWD2	Q9ULI1	1742 aa		13.76	□□□□□ -0.21
PFKM-222	ENST00000551339	QRICH2	Q9H0J4	1663 aa		13.75	□□□□□ -0.21
PFKM-222	ENST00000551339	PRDM11	Q9NQV5	511 aa		13.75	□□□□□ -0.21
PFKM-222	ENST00000551339	TIMELESS	Q9UNS1	1208 aa		13.75	□□□□□ -0.21
PFKM-222	ENST00000551339	PLCH1	Q4KWH8	1693 aa		13.75	□□□□□ -0.21
PFKM-222	ENST00000551339	KIAA0232	Q92628	1395 aa		13.74	□□□□□ -0.21
PFKM-222	ENST00000551339	ZC3H6	P61129	1189 aa	Known RBP	13.74	□□□□□ -0.21
PFKM-222	ENST00000551339	CARD11	Q9BXL7	1154 aa		13.74	□□□□□ -0.21
PFKM-222	ENST00000551339	CRYBG1	Q9Y4K1	1723 aa		13.73	□□□□□ -0.21
PFKM-222	ENST00000551339	CHRNA2	Q15822	529 aa		13.73	□□□□□ -0.21
PFKM-222	ENST00000551339	COL14A1	Q05707	1796 aa	Known RBP	13.73	□□□□□ -0.21
PFKM-222	ENST00000551339	BRD4	O60885	1362 aa	Predicted RBP	13.72	□□□□□ -0.21
PFKM-222	ENST00000551339	NLRP13	Q86W25	1043 aa		13.72	□□□□□ -0.21
PFKM-222	ENST00000551339	CCDC125	Q86Z20	511 aa		13.72	□□□□□ -0.21
PFKM-222	ENST00000551339	USP19	O94966	1318 aa		13.71	□□□□□ -0.21
PFKM-222	ENST00000551339	SPATA31A5	Q5VU36	1347 aa		13.71	□□□□□ -0.21
PFKM-222	ENST00000551339	SPATA31A7	Q8IWB4	1347 aa		13.71	□□□□□ -0.21
PFKM-222	ENST00000551339	GC	P02774	474 aa		13.71	□□□□□ -0.21
PFKM-222	ENST00000551339	FAM98C	Q17RN3	349 aa	Known RBP	13.71	□□□□□ -0.21
PFKM-222	ENST00000551339	ZNF692	Q9BU19	519 aa	Predicted RBP	13.71	□□□□□ -0.21
PFKM-222	ENST00000551339	USP6	P35125	1406 aa		13.71	□□□□□ -0.22
PFKM-222	ENST00000551339	SSH2	Q76I76	1423 aa		13.71	□□□□□ -0.22
PFKM-222	ENST00000551339	NRAP	Q86VF7	1730 aa		13.7	□□□□□ -0.22
PFKM-222	ENST00000551339	KRT27	Q7Z3Y8	459 aa		13.7	□□□□□ -0.22
PFKM-222	ENST00000551339	NLRP6	P59044	892 aa		13.69	□□□□□ -0.22
PFKM-222	ENST00000551339	STRN4	Q9NRL3	753 aa		13.69	□□□□□ -0.22
PFKM-222	ENST00000551339	CPD	O75976	1380 aa		13.69	□□□□□ -0.22
PFKM-222	ENST00000551339	SBNO2	Q9Y2G9	1366 aa		13.69	□□□□□ -0.22
PFKM-222	ENST00000551339	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.68	□□□□□ -0.22
PFKM-222	ENST00000551339	EVA1C	P58658	441 aa		13.68	□□□□□ -0.22
PFKM-222	ENST00000551339	CCER1	Q8TC90	406 aa	Predicted RBP	13.68	□□□□□ -0.22
PFKM-222	ENST00000551339	SPATA31A1	Q5TZJ5	1347 aa		13.67	□□□□□ -0.22
PFKM-222	ENST00000551339	BRWD3	Q6RI45	1802 aa		13.67	□□□□□ -0.22
PFKM-222	ENST00000551339		A0A0G2JS52	829 aa		13.67	□□□□□ -0.22
PFKM-222	ENST00000551339	MYT1	Q01538	1121 aa		13.67	□□□□□ -0.22
PFKM-222	ENST00000551339	TTC21B	Q7Z4L5	1316 aa		13.66	□□□□□ -0.22
PFKM-222	ENST00000551339	CPSF1	Q10570	1443 aa	Known RBP	13.66	□□□□□ -0.22
PFKM-222	ENST00000551339	NRK	Q7Z2Y5	1582 aa		13.66	□□□□□ -0.22
PFKM-222	ENST00000551339	CAMTA1	Q9Y6Y1	1673 aa		13.66	□□□□□ -0.22
PFKM-222	ENST00000551339	BLM	P54132	1417 aa	Predicted RBP	13.65	□□□□□ -0.22
PFKM-222	ENST00000551339	LARP1	Q6PKG0	1096 aa	Known RBP	13.65	□□□□□ -0.22
PFKM-222	ENST00000551339	PUS7	Q96PZ0	661 aa	Known RBP	13.64	□□□□□ -0.23
PFKM-222	ENST00000551339	SLC12A5	Q9H2X9	1139 aa		13.64	□□□□□ -0.23
PFKM-222	ENST00000551339	USP35	Q9P2H5	1018 aa		13.64	□□□□□ -0.23
PFKM-222	ENST00000551339	TTC21A	Q8NDW8	1320 aa		13.64	□□□□□ -0.23
PFKM-222	ENST00000551339	KTN1	Q86UP2	1357 aa	Known RBP	13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	ST20-MTHFS	A0A0A6YYL1	179 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	FAM182B	Q5T319	152 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	BARGIN	Q6ZT62	677 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	DEFB132	Q7Z7B7	95 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	TMC1	Q8TDI8	760 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	TESK2	Q96S53	571 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	SLIT3	O75094	1523 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	EP400	Q96L91	3159 aa		13.63	□□□□□ -0.23
PFKM-222	ENST00000551339	AATK	Q6ZMQ8	1374 aa		13.62	□□□□□ -0.23
PFKM-222	ENST00000551339	LMO7	Q8WWI1	1683 aa		13.62	□□□□□ -0.23
PFKM-222	ENST00000551339	PIK3C2A	O00443	1686 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	ZBTB7C	A1YPR0	619 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	SF3B2	Q13435	895 aa	Known RBP	13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	ARHGEF25	Q86VW2	580 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	TCP11L2	Q8N4U5	519 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	KCNH5	Q8NCM2	988 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	AXIN2	Q9Y2T1	843 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	CD163L1	Q9NR16	1453 aa		13.61	□□□□□ -0.23
PFKM-222	ENST00000551339	AKAP12	Q02952	1782 aa		13.6	□□□□□ -0.23
PFKM-222	ENST00000551339	THSD7A	Q9UPZ6	1657 aa		13.6	□□□□□ -0.23
PFKM-222	ENST00000551339	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PFKM-222	ENST00000551339	ZRANB1	Q9UGI0	708 aa		13.6	□□□□□ -0.23
PFKM-222	ENST00000551339	THRAP3	Q9Y2W1	955 aa	Known RBP	13.6	□□□□□ -0.23
PFKM-222	ENST00000551339	COL5A2	P05997	1499 aa	Predicted RBP	13.6	□□□□□ -0.23
PFKM-222	ENST00000551339	SLC24A1	O60721	1099 aa		13.59	□□□□□ -0.23
PFKM-222	ENST00000551339	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.59	□□□□□ -0.23
PFKM-222	ENST00000551339	USP31	Q70CQ4	1352 aa		13.58	□□□□□ -0.23
PFKM-222	ENST00000551339	SOX12	O15370	315 aa		13.58	□□□□□ -0.24
PFKM-222	ENST00000551339	NME9	Q86XW9	330 aa		13.58	□□□□□ -0.24
PFKM-222	ENST00000551339	TERF2IP	Q9NYB0	399 aa		13.58	□□□□□ -0.24
PFKM-222	ENST00000551339	PDE3B	Q13370	1112 aa		13.57	□□□□□ -0.24
PFKM-222	ENST00000551339	FAM196A	Q6ZSG2	479 aa		13.57	□□□□□ -0.24
PFKM-222	ENST00000551339	CRB1	P82279	1406 aa		13.56	□□□□□ -0.24

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