RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
PTPRR-211ENST00000551219 MORC1Q86VD1 984 aa8.51□□□□□ -1.05
PTPRR-211ENST00000551219 MYH16Q9H6N6 1097 aa8.51□□□□□ -1.05
PTPRR-211ENST00000551219 ZNF518AQ6AHZ1 1483 aa8.51□□□□□ -1.05
PTPRR-211ENST00000551219 RBM25P49756 843 aaKnown RBP8.51□□□□□ -1.05
PTPRR-211ENST00000551219 ADGRF5Q8IZF2 1346 aa8.5□□□□□ -1.05
PTPRR-211ENST00000551219 ANTXR1Q9H6X2 564 aa8.5□□□□□ -1.05
PTPRR-211ENST00000551219 AEBP1Q8IUX7 1158 aa8.5□□□□□ -1.05
PTPRR-211ENST00000551219 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 MKRN3Q13064 507 aaKnown RBP8.49□□□□□ -1.05
PTPRR-211ENST00000551219 DHX37Q8IY37 1157 aaKnown RBP8.49□□□□□ -1.05
PTPRR-211ENST00000551219 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 ADGRB2O60241 1585 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 HOXD11P31277 338 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-211ENST00000551219 QRICH2Q9H0J4 1663 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 KIF3BO15066 747 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 SEC24BO95487 1268 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 TCP11L2Q8N4U5 519 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 ZNF219Q9P2Y4 722 aaPredicted RBP8.49□□□□□ -1.05
PTPRR-211ENST00000551219 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
PTPRR-211ENST00000551219 PPRC1Q5VV67 1664 aaKnown RBP8.49□□□□□ -1.05
PTPRR-211ENST00000551219 UGGT1Q9NYU2 1555 aa8.48□□□□□ -1.05
PTPRR-211ENST00000551219 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
PTPRR-211ENST00000551219 MVPQ14764 893 aaKnown RBP8.48□□□□□ -1.05
PTPRR-211ENST00000551219 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
PTPRR-211ENST00000551219 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
PTPRR-211ENST00000551219 ADGRB1O14514 1584 aa8.48□□□□□ -1.05
PTPRR-211ENST00000551219 RPGRIP1LQ68CZ1 1315 aa8.47□□□□□ -1.05
PTPRR-211ENST00000551219 NOS1P29475 1434 aa8.47□□□□□ -1.05
PTPRR-211ENST00000551219 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
PTPRR-211ENST00000551219 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
PTPRR-211ENST00000551219 POGKQ9P215 609 aa8.47□□□□□ -1.05
PTPRR-211ENST00000551219 C14orf93Q9H972 538 aaKnown RBP8.46□□□□□ -1.05
PTPRR-211ENST00000551219 ANKRD36BQ8N2N9 1353 aa8.46□□□□□ -1.06
PTPRR-211ENST00000551219 SLKQ9H2G2 1235 aaPredicted RBP8.46□□□□□ -1.06
PTPRR-211ENST00000551219 PPLO60437 1756 aa8.46□□□□□ -1.06
PTPRR-211ENST00000551219 ABCC11Q96J66 1382 aa8.46□□□□□ -1.06
PTPRR-211ENST00000551219 RLBP1P12271 317 aa8.46□□□□□ -1.06
PTPRR-211ENST00000551219 HDAC1Q13547 482 aaPredicted RBP8.46□□□□□ -1.06
PTPRR-211ENST00000551219 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
PTPRR-211ENST00000551219 CHMP5Q9NZZ3 219 aa8.45□□□□□ -1.06
PTPRR-211ENST00000551219 FTSJ3Q8IY81 847 aaKnown RBP8.45□□□□□ -1.06
PTPRR-211ENST00000551219 ISY1Q9ULR0 285 aaKnown RBP8.45□□□□□ -1.06
PTPRR-211ENST00000551219 IL16Q14005 1332 aa8.45□□□□□ -1.06
PTPRR-211ENST00000551219 MTHFSP49914 203 aa8.44□□□□□ -1.06
PTPRR-211ENST00000551219 RRP7AQ9Y3A4 280 aaKnown RBP8.44□□□□□ -1.06
PTPRR-211ENST00000551219 EVC2Q86UK5 1308 aa8.44□□□□□ -1.06
PTPRR-211ENST00000551219 FSD2A1L4K1 749 aa8.44□□□□□ -1.06
PTPRR-211ENST00000551219 GOLGA6L3A6NEY3 463 aa8.44□□□□□ -1.06
PTPRR-211ENST00000551219 MCM4P33991 863 aa8.44□□□□□ -1.06
PTPRR-211ENST00000551219 DDX19BQ9UMR2 479 aa8.44□□□□□ -1.06
PTPRR-211ENST00000551219 C22orf23Q9BZE7 217 aa8.43□□□□□ -1.06
PTPRR-211ENST00000551219 KIDINS220Q9ULH0 1771 aa8.43□□□□□ -1.06
PTPRR-211ENST00000551219 RGS22Q8NE09 1264 aa8.43□□□□□ -1.06
PTPRR-211ENST00000551219 SLC12A5Q9H2X9 1139 aa8.43□□□□□ -1.06
PTPRR-211ENST00000551219 GLI2P10070 1586 aa8.43□□□□□ -1.06
PTPRR-211ENST00000551219 DDX11L8A8MPP1 907 aa8.43□□□□□ -1.06
PTPRR-211ENST00000551219 MED14O60244 1454 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 PTMSP20962 102 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 HSCBQ8IWL3 235 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 TRAK1Q9UPV9 953 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 TULP4Q9NRJ4 1543 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 HECW2Q9P2P5 1572 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 NPATQ14207 1427 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
PTPRR-211ENST00000551219 KIF16BQ96L93 1317 aa8.41□□□□□ -1.06
PTPRR-211ENST00000551219 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
PTPRR-211ENST00000551219 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRR-211ENST00000551219 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
PTPRR-211ENST00000551219 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
PTPRR-211ENST00000551219 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
PTPRR-211ENST00000551219 SMC4Q9NTJ3 1288 aa8.41□□□□□ -1.06
PTPRR-211ENST00000551219 TNNQ9UQP3 1299 aa8.41□□□□□ -1.06
PTPRR-211ENST00000551219 ARHGEF28Q8N1W1 1705 aaKnown RBP8.41□□□□□ -1.06
PTPRR-211ENST00000551219 TNNT2P45379 298 aaPredicted RBP8.41□□□□□ -1.06
PTPRR-211ENST00000551219 SNX21Q969T3 373 aa8.41□□□□□ -1.06
PTPRR-211ENST00000551219 COL3A1P02461 1466 aaPredicted RBP8.41□□□□□ -1.06
PTPRR-211ENST00000551219 IPO8O15397 1037 aaKnown RBP8.4□□□□□ -1.06
PTPRR-211ENST00000551219 MRE11P49959 708 aa8.4□□□□□ -1.06
PTPRR-211ENST00000551219 ATF7IPQ6VMQ6 1270 aa8.4□□□□□ -1.06
PTPRR-211ENST00000551219 UBE2Q2Q8WVN8 375 aa8.4□□□□□ -1.06
PTPRR-211ENST00000551219 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.06
PTPRR-211ENST00000551219 CHMP4BQ9H444 224 aaKnown RBP8.4□□□□□ -1.06
PTPRR-211ENST00000551219 PIK3C2BO00750 1634 aa8.4□□□□□ -1.06
PTPRR-211ENST00000551219 REREQ9P2R6 1566 aa8.4□□□□□ -1.06
PTPRR-211ENST00000551219 TRIM27P14373 513 aa8.4□□□□□ -1.07
PTPRR-211ENST00000551219 MFAP1P55081 439 aaKnown RBP8.4□□□□□ -1.07
PTPRR-211ENST00000551219 MLH3Q9UHC1 1453 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 ABCC3O15438 1527 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 TRAK2O60296 914 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 ALDH1L2Q3SY69 923 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 PLEKHF1Q96S99 279 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 ANKRD26Q9UPS8 1709 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 CAMSAP1Q5T5Y3 1602 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 VGFO15240 615 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-211ENST00000551219 XRCC6P12956 609 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPRR-211ENST00000551219 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
PTPRR-211ENST00000551219 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
PTPRR-211ENST00000551219 ZFYVE9O95405 1425 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms