RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 SBNO2Q9Y2G9 1366 aa10.84□□□□□ -0.67
ERBB3-218ENST00000551176 ALS2Q96Q42 1657 aa10.84□□□□□ -0.67
ERBB3-218ENST00000551176 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
ERBB3-218ENST00000551176 NUTM2GQ5VZR2 741 aa10.83□□□□□ -0.68
ERBB3-218ENST00000551176 TESK2Q96S53 571 aa10.83□□□□□ -0.68
ERBB3-218ENST00000551176 SLIT2O94813 1529 aa10.83□□□□□ -0.68
ERBB3-218ENST00000551176 ATRNO75882 1429 aa10.83□□□□□ -0.68
ERBB3-218ENST00000551176 ITSN1Q15811 1721 aa10.82□□□□□ -0.68
ERBB3-218ENST00000551176 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
ERBB3-218ENST00000551176 CCER1Q8TC90 406 aaPredicted RBP10.82□□□□□ -0.68
ERBB3-218ENST00000551176 ABCA3Q99758 1704 aa10.81□□□□□ -0.68
ERBB3-218ENST00000551176 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
ERBB3-218ENST00000551176 RBM6P78332 1123 aaKnown RBP10.81□□□□□ -0.68
ERBB3-218ENST00000551176 TIMELESSQ9UNS1 1208 aa10.81□□□□□ -0.68
ERBB3-218ENST00000551176 RGS12O14924 1447 aa10.81□□□□□ -0.68
ERBB3-218ENST00000551176 USP6P35125 1406 aa10.81□□□□□ -0.68
ERBB3-218ENST00000551176 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
ERBB3-218ENST00000551176 UNC5CLQ8IV45 518 aa10.8□□□□□ -0.68
ERBB3-218ENST00000551176 TRPC5Q9UL62 973 aaPredicted RBP10.8□□□□□ -0.68
ERBB3-218ENST00000551176 CDK12Q9NYV4 1490 aaPredicted RBP10.8□□□□□ -0.68
ERBB3-218ENST00000551176 CRYBG1Q9Y4K1 1723 aa10.79□□□□□ -0.68
ERBB3-218ENST00000551176 CPSF1Q10570 1443 aaKnown RBP10.79□□□□□ -0.68
ERBB3-218ENST00000551176 ABTB2Q8N961 1025 aa10.79□□□□□ -0.68
ERBB3-218ENST00000551176 CD163L1Q9NR16 1453 aa10.79□□□□□ -0.68
ERBB3-218ENST00000551176 USP19O94966 1318 aa10.79□□□□□ -0.68
ERBB3-218ENST00000551176 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
ERBB3-218ENST00000551176 USP47Q96K76 1375 aa10.78□□□□□ -0.68
ERBB3-218ENST00000551176 MARF1Q9Y4F3 1742 aaKnown RBP10.78□□□□□ -0.68
ERBB3-218ENST00000551176 GJD4Q96KN9 370 aaPredicted RBP10.78□□□□□ -0.68
ERBB3-218ENST00000551176 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
ERBB3-218ENST00000551176 SLC12A5Q9H2X9 1139 aa10.77□□□□□ -0.69
ERBB3-218ENST00000551176 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.69
ERBB3-218ENST00000551176 ZC3H6P61129 1189 aaKnown RBP10.76□□□□□ -0.69
ERBB3-218ENST00000551176 CHRNA2Q15822 529 aa10.76□□□□□ -0.69
ERBB3-218ENST00000551176 VPS72Q15906 364 aa10.76□□□□□ -0.69
ERBB3-218ENST00000551176 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
ERBB3-218ENST00000551176 GLI3P10071 1580 aa10.76□□□□□ -0.69
ERBB3-218ENST00000551176 TTC21BQ7Z4L5 1316 aa10.76□□□□□ -0.69
ERBB3-218ENST00000551176 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
ERBB3-218ENST00000551176 NRKQ7Z2Y5 1582 aa10.75□□□□□ -0.69
ERBB3-218ENST00000551176 GCP02774 474 aa10.75□□□□□ -0.69
ERBB3-218ENST00000551176 PUS7Q96PZ0 661 aaKnown RBP10.75□□□□□ -0.69
ERBB3-218ENST00000551176 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
ERBB3-218ENST00000551176 PRDM11Q9NQV5 511 aa10.75□□□□□ -0.69
ERBB3-218ENST00000551176 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
ERBB3-218ENST00000551176 PLCH1Q4KWH8 1693 aa10.75□□□□□ -0.69
ERBB3-218ENST00000551176 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
ERBB3-218ENST00000551176 PIK3C2AO00443 1686 aa10.74□□□□□ -0.69
ERBB3-218ENST00000551176 NLRP6P59044 892 aa10.74□□□□□ -0.69
ERBB3-218ENST00000551176 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
ERBB3-218ENST00000551176 TMC1Q8TDI8 760 aa10.74□□□□□ -0.69
ERBB3-218ENST00000551176 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.74□□□□□ -0.69
ERBB3-218ENST00000551176 CPDO75976 1380 aa10.74□□□□□ -0.69
ERBB3-218ENST00000551176 COL14A1Q05707 1796 aaKnown RBP10.73□□□□□ -0.69
ERBB3-218ENST00000551176 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
ERBB3-218ENST00000551176 A0A1W2PP64 1363 aa10.73□□□□□ -0.69
ERBB3-218ENST00000551176 SLIT3O75094 1523 aa10.73□□□□□ -0.69
ERBB3-218ENST00000551176 NRAPQ86VF7 1730 aa10.72□□□□□ -0.69
ERBB3-218ENST00000551176 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-218ENST00000551176 NME9Q86XW9 330 aa10.72□□□□□ -0.69
ERBB3-218ENST00000551176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.72□□□□□ -0.69
ERBB3-218ENST00000551176 TTC21AQ8NDW8 1320 aa10.72□□□□□ -0.69
ERBB3-218ENST00000551176 CAMTA1Q9Y6Y1 1673 aa10.72□□□□□ -0.69
ERBB3-218ENST00000551176 NWD2Q9ULI1 1742 aa10.72□□□□□ -0.69
ERBB3-218ENST00000551176 TMF1P82094 1093 aa10.71□□□□□ -0.69
ERBB3-218ENST00000551176 AKAP12Q02952 1782 aa10.71□□□□□ -0.69
ERBB3-218ENST00000551176 SPATA31A5Q5VU36 1347 aa10.71□□□□□ -0.69
ERBB3-218ENST00000551176 SPATA31A7Q8IWB4 1347 aa10.71□□□□□ -0.69
ERBB3-218ENST00000551176 CCDC9Q9Y3X0 531 aaKnown RBP10.71□□□□□ -0.69
ERBB3-218ENST00000551176 EP400Q96L91 3159 aa10.7□□□□□ -0.7
ERBB3-218ENST00000551176 HDGFL2Q7Z4V5 671 aaPredicted RBP10.7□□□□□ -0.7
ERBB3-218ENST00000551176 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
ERBB3-218ENST00000551176 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
ERBB3-218ENST00000551176 TERF2IPQ9NYB0 399 aa10.7□□□□□ -0.7
ERBB3-218ENST00000551176 MON2Q7Z3U7 1717 aa10.7□□□□□ -0.7
ERBB3-218ENST00000551176 LMO7Q8WWI1 1683 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
ERBB3-218ENST00000551176 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 NINLQ9Y2I6 1382 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 SOX12O15370 315 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 FAM98CQ17RN3 349 aaKnown RBP10.69□□□□□ -0.7
ERBB3-218ENST00000551176 LARP1Q6PKG0 1096 aaKnown RBP10.69□□□□□ -0.7
ERBB3-218ENST00000551176 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
ERBB3-218ENST00000551176 NFAT5O94916 1531 aa10.68□□□□□ -0.7
ERBB3-218ENST00000551176 AATKQ6ZMQ8 1374 aa10.68□□□□□ -0.7
ERBB3-218ENST00000551176 ZBTB7CA1YPR0 619 aa10.68□□□□□ -0.7
ERBB3-218ENST00000551176 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
ERBB3-218ENST00000551176 ARHGEF25Q86VW2 580 aa10.68□□□□□ -0.7
ERBB3-218ENST00000551176 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
ERBB3-218ENST00000551176 ANKRD36BQ8N2N9 1353 aa10.67□□□□□ -0.7
ERBB3-218ENST00000551176 OVOS2A0A0J9YW53 1432 aa10.67□□□□□ -0.7
ERBB3-218ENST00000551176 OVOS2Q6IE36 1432 aa10.67□□□□□ -0.7
ERBB3-218ENST00000551176 EVA1CP58658 441 aa10.66□□□□□ -0.7
ERBB3-218ENST00000551176 KCNH5Q8NCM2 988 aa10.66□□□□□ -0.7
ERBB3-218ENST00000551176 CARD14Q9BXL6 1004 aa10.66□□□□□ -0.7
ERBB3-218ENST00000551176 USP35Q9P2H5 1018 aa10.66□□□□□ -0.7
ERBB3-218ENST00000551176 C11orf95C9JLR9 678 aaPredicted RBP10.65□□□□□ -0.7
ERBB3-218ENST00000551176 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 292.2 ms