RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 BRD4O60885 1362 aaPredicted RBP21.76■■□□□ 1.07
PRPF40B-211ENST00000551063 USP47Q96K76 1375 aa21.76■■□□□ 1.07
PRPF40B-211ENST00000551063 LMOD2Q6P5Q4 547 aa21.76■■□□□ 1.07
PRPF40B-211ENST00000551063 TRPC5Q9UL62 973 aaPredicted RBP21.76■■□□□ 1.07
PRPF40B-211ENST00000551063 CABP1Q9NZU7 370 aa21.75■■□□□ 1.07
PRPF40B-211ENST00000551063 ST20-MTHFSA0A0A6YYL1 179 aa21.74■■□□□ 1.07
PRPF40B-211ENST00000551063 TESK2Q96S53 571 aa21.74■■□□□ 1.07
PRPF40B-211ENST00000551063 ALS2Q96Q42 1657 aa21.74■■□□□ 1.07
PRPF40B-211ENST00000551063 PUS7Q96PZ0 661 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-211ENST00000551063 RGS12O14924 1447 aa21.72■■□□□ 1.07
PRPF40B-211ENST00000551063 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
PRPF40B-211ENST00000551063 USP6P35125 1406 aa21.72■■□□□ 1.07
PRPF40B-211ENST00000551063 HAP1P54257 671 aaPredicted RBP21.71■■□□□ 1.07
PRPF40B-211ENST00000551063 CABLES1Q8TDN4 633 aa21.69■■□□□ 1.06
PRPF40B-211ENST00000551063 ABCA3Q99758 1704 aa21.67■■□□□ 1.06
PRPF40B-211ENST00000551063 CPSF1Q10570 1443 aaKnown RBP21.67■■□□□ 1.06
PRPF40B-211ENST00000551063 SSH2Q76I76 1423 aa21.67■■□□□ 1.06
PRPF40B-211ENST00000551063 ZNF692Q9BU19 519 aaPredicted RBP21.67■■□□□ 1.06
PRPF40B-211ENST00000551063 ATRNO75882 1429 aa21.66■■□□□ 1.06
PRPF40B-211ENST00000551063 SLIT2O94813 1529 aa21.65■■□□□ 1.06
PRPF40B-211ENST00000551063 NINLQ9Y2I6 1382 aa21.65■■□□□ 1.06
PRPF40B-211ENST00000551063 MARF1Q9Y4F3 1742 aaKnown RBP21.64■■□□□ 1.06
PRPF40B-211ENST00000551063 TMF1P82094 1093 aa21.64■■□□□ 1.05
PRPF40B-211ENST00000551063 ABTB2Q8N961 1025 aa21.64■■□□□ 1.05
PRPF40B-211ENST00000551063 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.05
PRPF40B-211ENST00000551063 USP19O94966 1318 aa21.63■■□□□ 1.05
PRPF40B-211ENST00000551063 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
PRPF40B-211ENST00000551063 CRYBG1Q9Y4K1 1723 aa21.62■■□□□ 1.05
PRPF40B-211ENST00000551063 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
PRPF40B-211ENST00000551063 NLRP13Q86W25 1043 aa21.61■■□□□ 1.05
PRPF40B-211ENST00000551063 TMC1Q8TDI8 760 aa21.61■■□□□ 1.05
PRPF40B-211ENST00000551063 GJD4Q96KN9 370 aaPredicted RBP21.61■■□□□ 1.05
PRPF40B-211ENST00000551063 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-211ENST00000551063 TTC21BQ7Z4L5 1316 aa21.6■■□□□ 1.05
PRPF40B-211ENST00000551063 TTC21AQ8NDW8 1320 aa21.6■■□□□ 1.05
PRPF40B-211ENST00000551063 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
PRPF40B-211ENST00000551063 UNC5CLQ8IV45 518 aa21.6■■□□□ 1.05
PRPF40B-211ENST00000551063 NUTM2GQ5VZR2 741 aa21.59■■□□□ 1.05
PRPF40B-211ENST00000551063 HDGFL2Q7Z4V5 671 aaPredicted RBP21.59■■□□□ 1.05
PRPF40B-211ENST00000551063 AKAP12Q02952 1782 aa21.59■■□□□ 1.05
PRPF40B-211ENST00000551063 SLC12A5Q9H2X9 1139 aa21.58■■□□□ 1.05
PRPF40B-211ENST00000551063 TERF2IPQ9NYB0 399 aa21.58■■□□□ 1.05
PRPF40B-211ENST00000551063 PHRF1Q9P1Y6 1649 aaKnown RBP21.58■■□□□ 1.04
PRPF40B-211ENST00000551063 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.04
PRPF40B-211ENST00000551063 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
PRPF40B-211ENST00000551063 FAM83GA6ND36 823 aa21.57■■□□□ 1.04
PRPF40B-211ENST00000551063 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
PRPF40B-211ENST00000551063 A0A1W2PP64 1363 aa21.57■■□□□ 1.04
PRPF40B-211ENST00000551063 NLRP6P59044 892 aa21.56■■□□□ 1.04
PRPF40B-211ENST00000551063 PRDM11Q9NQV5 511 aa21.56■■□□□ 1.04
PRPF40B-211ENST00000551063 KIAA0232Q92628 1395 aa21.56■■□□□ 1.04
PRPF40B-211ENST00000551063 SLIT3O75094 1523 aa21.55■■□□□ 1.04
PRPF40B-211ENST00000551063 MON2Q7Z3U7 1717 aa21.55■■□□□ 1.04
PRPF40B-211ENST00000551063 CPDO75976 1380 aa21.55■■□□□ 1.04
PRPF40B-211ENST00000551063 NWD2Q9ULI1 1742 aa21.55■■□□□ 1.04
PRPF40B-211ENST00000551063 EDC4Q6P2E9 1401 aaKnown RBP21.55■■□□□ 1.04
PRPF40B-211ENST00000551063 COL14A1Q05707 1796 aaKnown RBP21.54■■□□□ 1.04
PRPF40B-211ENST00000551063 PIK3C2AO00443 1686 aa21.54■■□□□ 1.04
PRPF40B-211ENST00000551063 CCDC125Q86Z20 511 aa21.54■■□□□ 1.04
PRPF40B-211ENST00000551063 PLCH1Q4KWH8 1693 aa21.53■■□□□ 1.04
PRPF40B-211ENST00000551063 GCP02774 474 aa21.53■■□□□ 1.04
PRPF40B-211ENST00000551063 ANKRD36BQ8N2N9 1353 aa21.52■■□□□ 1.04
PRPF40B-211ENST00000551063 VPS72Q15906 364 aa21.52■■□□□ 1.04
PRPF40B-211ENST00000551063 USP31Q70CQ4 1352 aa21.51■■□□□ 1.03
PRPF40B-211ENST00000551063 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
PRPF40B-211ENST00000551063 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
PRPF40B-211ENST00000551063 BTG4Q9NY30 223 aa21.51■■□□□ 1.03
PRPF40B-211ENST00000551063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.48■■□□□ 1.03
PRPF40B-211ENST00000551063 KCNH5Q8NCM2 988 aa21.48■■□□□ 1.03
PRPF40B-211ENST00000551063 NRAPQ86VF7 1730 aa21.48■■□□□ 1.03
PRPF40B-211ENST00000551063 CHRNA2Q15822 529 aa21.47■■□□□ 1.03
PRPF40B-211ENST00000551063 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
PRPF40B-211ENST00000551063 GLI3P10071 1580 aa21.46■■□□□ 1.03
PRPF40B-211ENST00000551063 NME9Q86XW9 330 aa21.46■■□□□ 1.03
PRPF40B-211ENST00000551063 USP54Q70EL1 1684 aa21.45■■□□□ 1.02
PRPF40B-211ENST00000551063 OVOS2A0A0J9YW53 1432 aa21.45■■□□□ 1.02
PRPF40B-211ENST00000551063 OVOS2Q6IE36 1432 aa21.45■■□□□ 1.02
PRPF40B-211ENST00000551063 SEPT12Q8IYM1 358 aa21.44■■□□□ 1.02
PRPF40B-211ENST00000551063 AATKQ6ZMQ8 1374 aa21.44■■□□□ 1.02
PRPF40B-211ENST00000551063 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
PRPF40B-211ENST00000551063 ONECUT3O60422 494 aaPredicted RBP21.43■■□□□ 1.02
PRPF40B-211ENST00000551063 NFAT5O94916 1531 aa21.42■■□□□ 1.02
PRPF40B-211ENST00000551063 CAMTA1Q9Y6Y1 1673 aa21.41■■□□□ 1.02
PRPF40B-211ENST00000551063 SPATA31A5Q5VU36 1347 aa21.41■■□□□ 1.02
PRPF40B-211ENST00000551063 SPATA31A7Q8IWB4 1347 aa21.41■■□□□ 1.02
PRPF40B-211ENST00000551063 ARHGEF25Q86VW2 580 aa21.41■■□□□ 1.02
PRPF40B-211ENST00000551063 ZRANB1Q9UGI0 708 aa21.41■■□□□ 1.02
PRPF40B-211ENST00000551063 MYOM1P52179 1685 aa21.4■■□□□ 1.02
PRPF40B-211ENST00000551063 STRN4Q9NRL3 753 aa21.39■■□□□ 1.01
PRPF40B-211ENST00000551063 ABCC6O95255 1503 aa21.39■■□□□ 1.01
PRPF40B-211ENST00000551063 COL5A2P05997 1499 aaPredicted RBP21.39■■□□□ 1.01
PRPF40B-211ENST00000551063 BLMP54132 1417 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-211ENST00000551063 SOX12O15370 315 aa21.38■■□□□ 1.01
PRPF40B-211ENST00000551063 SF3B2Q13435 895 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-211ENST00000551063 SPATA31A1Q5TZJ5 1347 aa21.37■■□□□ 1.01
PRPF40B-211ENST00000551063 ZBTB7CA1YPR0 619 aa21.37■■□□□ 1.01
PRPF40B-211ENST00000551063 EVA1CP58658 441 aa21.37■■□□□ 1.01
PRPF40B-211ENST00000551063 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
PRPF40B-211ENST00000551063 COG3Q96JB2 828 aa21.37■■□□□ 1.01
PRPF40B-211ENST00000551063 NSD3Q9BZ95 1437 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms