RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
CPNE8-207ENST00000550863 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
CPNE8-207ENST00000550863 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
CPNE8-207ENST00000550863 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
CPNE8-207ENST00000550863 CDK19Q9BWU1 502 aa16.65■□□□□ 0.26
CPNE8-207ENST00000550863 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
CPNE8-207ENST00000550863 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
CPNE8-207ENST00000550863 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
CPNE8-207ENST00000550863 AKAP12Q02952 1782 aa16.64■□□□□ 0.25
CPNE8-207ENST00000550863 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
CPNE8-207ENST00000550863 LMO7Q8WWI1 1683 aa16.63■□□□□ 0.25
CPNE8-207ENST00000550863 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
CPNE8-207ENST00000550863 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
CPNE8-207ENST00000550863 TNS1Q9HBL0 1735 aaKnown RBP16.62■□□□□ 0.25
CPNE8-207ENST00000550863 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
CPNE8-207ENST00000550863 NEUROD1Q13562 356 aa16.61■□□□□ 0.25
CPNE8-207ENST00000550863 VPS72Q15906 364 aa16.61■□□□□ 0.25
CPNE8-207ENST00000550863 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
CPNE8-207ENST00000550863 ACEP12821 1306 aa16.61■□□□□ 0.25
CPNE8-207ENST00000550863 SEPT12Q8IYM1 358 aa16.6■□□□□ 0.25
CPNE8-207ENST00000550863 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
CPNE8-207ENST00000550863 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
CPNE8-207ENST00000550863 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
CPNE8-207ENST00000550863 RGPD5Q99666 1765 aa16.59■□□□□ 0.25
CPNE8-207ENST00000550863 CHRNA2Q15822 529 aa16.59■□□□□ 0.25
CPNE8-207ENST00000550863 RGPD1P0DJD0 1748 aa16.59■□□□□ 0.25
CPNE8-207ENST00000550863 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.24
CPNE8-207ENST00000550863 WNK3Q9BYP7 1800 aa16.58■□□□□ 0.24
CPNE8-207ENST00000550863 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
CPNE8-207ENST00000550863 MON2Q7Z3U7 1717 aa16.56■□□□□ 0.24
CPNE8-207ENST00000550863 CAMTA1Q9Y6Y1 1673 aa16.56■□□□□ 0.24
CPNE8-207ENST00000550863 A0A0G2JS52 829 aa16.56■□□□□ 0.24
CPNE8-207ENST00000550863 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
CPNE8-207ENST00000550863 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
CPNE8-207ENST00000550863 MYT1Q01538 1121 aa16.56■□□□□ 0.24
CPNE8-207ENST00000550863 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
CPNE8-207ENST00000550863 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
CPNE8-207ENST00000550863 NBPF8Q3BBV2 869 aa16.55■□□□□ 0.24
CPNE8-207ENST00000550863 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
CPNE8-207ENST00000550863 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
CPNE8-207ENST00000550863 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
CPNE8-207ENST00000550863 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
CPNE8-207ENST00000550863 SLIT3O75094 1523 aa16.54■□□□□ 0.24
CPNE8-207ENST00000550863 COL18A1P39060 1754 aa16.54■□□□□ 0.24
CPNE8-207ENST00000550863 USP6P35125 1406 aa16.53■□□□□ 0.24
CPNE8-207ENST00000550863 PLEKHG3A1L390 1219 aa16.53■□□□□ 0.24
CPNE8-207ENST00000550863 USP19O94966 1318 aa16.52■□□□□ 0.24
CPNE8-207ENST00000550863 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.24
CPNE8-207ENST00000550863 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.24
CPNE8-207ENST00000550863 STRN4Q9NRL3 753 aa16.52■□□□□ 0.24
CPNE8-207ENST00000550863 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
CPNE8-207ENST00000550863 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
CPNE8-207ENST00000550863 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
CPNE8-207ENST00000550863 ONECUT3O60422 494 aaPredicted RBP16.5■□□□□ 0.23
CPNE8-207ENST00000550863 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
CPNE8-207ENST00000550863 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
CPNE8-207ENST00000550863 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
CPNE8-207ENST00000550863 LTN1O94822 1766 aa16.49■□□□□ 0.23
CPNE8-207ENST00000550863 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
CPNE8-207ENST00000550863 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
CPNE8-207ENST00000550863 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
CPNE8-207ENST00000550863 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
CPNE8-207ENST00000550863 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
CPNE8-207ENST00000550863 RREB1Q92766 1687 aa16.46■□□□□ 0.23
CPNE8-207ENST00000550863 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
CPNE8-207ENST00000550863 LARP1Q6PKG0 1096 aaKnown RBP16.45■□□□□ 0.22
CPNE8-207ENST00000550863 CPDO75976 1380 aa16.45■□□□□ 0.22
CPNE8-207ENST00000550863 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
CPNE8-207ENST00000550863 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
CPNE8-207ENST00000550863 NFAT5O94916 1531 aa16.45■□□□□ 0.22
CPNE8-207ENST00000550863 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
CPNE8-207ENST00000550863 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
CPNE8-207ENST00000550863 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
CPNE8-207ENST00000550863 GCP02774 474 aa16.42■□□□□ 0.22
CPNE8-207ENST00000550863 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
CPNE8-207ENST00000550863 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
CPNE8-207ENST00000550863 SOX12O15370 315 aa16.41■□□□□ 0.22
CPNE8-207ENST00000550863 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
CPNE8-207ENST00000550863 NLRP6P59044 892 aa16.4■□□□□ 0.22
CPNE8-207ENST00000550863 NLRP13Q86W25 1043 aa16.4■□□□□ 0.22
CPNE8-207ENST00000550863 LRP5O75197 1615 aa16.4■□□□□ 0.22
CPNE8-207ENST00000550863 SF3B2Q13435 895 aaKnown RBP16.39■□□□□ 0.21
CPNE8-207ENST00000550863 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.21
CPNE8-207ENST00000550863 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
CPNE8-207ENST00000550863 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
CPNE8-207ENST00000550863 CRB1P82279 1406 aa16.38■□□□□ 0.21
CPNE8-207ENST00000550863 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
CPNE8-207ENST00000550863 EVA1CP58658 441 aa16.38■□□□□ 0.21
CPNE8-207ENST00000550863 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
CPNE8-207ENST00000550863 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
CPNE8-207ENST00000550863 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
CPNE8-207ENST00000550863 AXIN2Q9Y2T1 843 aa16.36■□□□□ 0.21
CPNE8-207ENST00000550863 RGPD2P0DJD1 1756 aa16.36■□□□□ 0.21
CPNE8-207ENST00000550863 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
CPNE8-207ENST00000550863 TRIM37O94972 964 aa16.35■□□□□ 0.21
CPNE8-207ENST00000550863 AATKQ6ZMQ8 1374 aa16.35■□□□□ 0.21
CPNE8-207ENST00000550863 MYOM1P52179 1685 aa16.34■□□□□ 0.21
CPNE8-207ENST00000550863 BAG6P46379 1132 aa16.34■□□□□ 0.21
CPNE8-207ENST00000550863 EZH2Q15910 746 aaKnown RBP16.34■□□□□ 0.21
CPNE8-207ENST00000550863 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms