RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 ACEP12821 1306 aa16.76■□□□□ 0.27
TUBA1A-207ENST00000550767 SPATA31A3Q5VYP0 1347 aa16.76■□□□□ 0.27
TUBA1A-207ENST00000550767 ALS2Q96Q42 1657 aa16.76■□□□□ 0.27
TUBA1A-207ENST00000550767 FNBP4Q8N3X1 1017 aaPredicted RBP16.76■□□□□ 0.27
TUBA1A-207ENST00000550767 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
TUBA1A-207ENST00000550767 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
TUBA1A-207ENST00000550767 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
TUBA1A-207ENST00000550767 CABP1Q9NZU7 370 aa16.75■□□□□ 0.27
TUBA1A-207ENST00000550767 USP21Q9UK80 565 aa16.75■□□□□ 0.27
TUBA1A-207ENST00000550767 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
TUBA1A-207ENST00000550767 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
TUBA1A-207ENST00000550767 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
TUBA1A-207ENST00000550767 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
TUBA1A-207ENST00000550767 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
TUBA1A-207ENST00000550767 NINLQ9Y2I6 1382 aa16.72■□□□□ 0.27
TUBA1A-207ENST00000550767 USP6P35125 1406 aa16.71■□□□□ 0.27
TUBA1A-207ENST00000550767 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
TUBA1A-207ENST00000550767 ABCA3Q99758 1704 aa16.71■□□□□ 0.27
TUBA1A-207ENST00000550767 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
TUBA1A-207ENST00000550767 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
TUBA1A-207ENST00000550767 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
TUBA1A-207ENST00000550767 MYOM1P52179 1685 aa16.7■□□□□ 0.26
TUBA1A-207ENST00000550767 RGS12O14924 1447 aa16.69■□□□□ 0.26
TUBA1A-207ENST00000550767 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
TUBA1A-207ENST00000550767 ATRNO75882 1429 aa16.68■□□□□ 0.26
TUBA1A-207ENST00000550767 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
TUBA1A-207ENST00000550767 CRYBG1Q9Y4K1 1723 aa16.68■□□□□ 0.26
TUBA1A-207ENST00000550767 ZNF692Q9BU19 519 aaPredicted RBP16.68■□□□□ 0.26
TUBA1A-207ENST00000550767 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
TUBA1A-207ENST00000550767 CD163L1Q9NR16 1453 aa16.68■□□□□ 0.26
TUBA1A-207ENST00000550767 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
TUBA1A-207ENST00000550767 KTN1Q86UP2 1357 aaKnown RBP16.67■□□□□ 0.26
TUBA1A-207ENST00000550767 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
TUBA1A-207ENST00000550767 A0A1W2PP64 1363 aa16.66■□□□□ 0.26
TUBA1A-207ENST00000550767 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
TUBA1A-207ENST00000550767 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
TUBA1A-207ENST00000550767 PHRF1Q9P1Y6 1649 aaKnown RBP16.65■□□□□ 0.26
TUBA1A-207ENST00000550767 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
TUBA1A-207ENST00000550767 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
TUBA1A-207ENST00000550767 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.26
TUBA1A-207ENST00000550767 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.26
TUBA1A-207ENST00000550767 SLIT2O94813 1529 aa16.64■□□□□ 0.25
TUBA1A-207ENST00000550767 UNC5CLQ8IV45 518 aa16.64■□□□□ 0.25
TUBA1A-207ENST00000550767 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
TUBA1A-207ENST00000550767 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
TUBA1A-207ENST00000550767 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
TUBA1A-207ENST00000550767 ABTB2Q8N961 1025 aa16.63■□□□□ 0.25
TUBA1A-207ENST00000550767 GJD4Q96KN9 370 aaPredicted RBP16.63■□□□□ 0.25
TUBA1A-207ENST00000550767 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
TUBA1A-207ENST00000550767 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
TUBA1A-207ENST00000550767 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
TUBA1A-207ENST00000550767 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
TUBA1A-207ENST00000550767 USP54Q70EL1 1684 aa16.6■□□□□ 0.25
TUBA1A-207ENST00000550767 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
TUBA1A-207ENST00000550767 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
TUBA1A-207ENST00000550767 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
TUBA1A-207ENST00000550767 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.25
TUBA1A-207ENST00000550767 PLCH1Q4KWH8 1693 aa16.58■□□□□ 0.24
TUBA1A-207ENST00000550767 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.24
TUBA1A-207ENST00000550767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.58■□□□□ 0.24
TUBA1A-207ENST00000550767 NLRP6P59044 892 aa16.57■□□□□ 0.24
TUBA1A-207ENST00000550767 USP19O94966 1318 aa16.57■□□□□ 0.24
TUBA1A-207ENST00000550767 SLIT3O75094 1523 aa16.57■□□□□ 0.24
TUBA1A-207ENST00000550767 EP400Q96L91 3159 aa16.57■□□□□ 0.24
TUBA1A-207ENST00000550767 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
TUBA1A-207ENST00000550767 VPS72Q15906 364 aa16.56■□□□□ 0.24
TUBA1A-207ENST00000550767 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
TUBA1A-207ENST00000550767 GLI3P10071 1580 aa16.56■□□□□ 0.24
TUBA1A-207ENST00000550767 COL14A1Q05707 1796 aaKnown RBP16.55■□□□□ 0.24
TUBA1A-207ENST00000550767 NME9Q86XW9 330 aa16.54■□□□□ 0.24
TUBA1A-207ENST00000550767 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
TUBA1A-207ENST00000550767 USP31Q70CQ4 1352 aa16.53■□□□□ 0.24
TUBA1A-207ENST00000550767 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
TUBA1A-207ENST00000550767 OVOS2A0A0J9YW53 1432 aa16.52■□□□□ 0.23
TUBA1A-207ENST00000550767 OVOS2Q6IE36 1432 aa16.52■□□□□ 0.23
TUBA1A-207ENST00000550767 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 GCP02774 474 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 BRWD3Q6RI45 1802 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
TUBA1A-207ENST00000550767 NRAPQ86VF7 1730 aa16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 LTN1O94822 1766 aa16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 NFAT5O94916 1531 aa16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
TUBA1A-207ENST00000550767 CPDO75976 1380 aa16.49■□□□□ 0.23
TUBA1A-207ENST00000550767 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
TUBA1A-207ENST00000550767 PANK3Q9H999 370 aa16.49■□□□□ 0.23
TUBA1A-207ENST00000550767 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
TUBA1A-207ENST00000550767 SOX12O15370 315 aa16.48■□□□□ 0.23
TUBA1A-207ENST00000550767 COG3Q96JB2 828 aa16.48■□□□□ 0.23
TUBA1A-207ENST00000550767 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
TUBA1A-207ENST00000550767 FYB1O15117 783 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms