RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 CABP2Q9NPB3 220 aa23.39■■□□□ 1.33
TSFM-210ENST00000550559 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.33
TSFM-210ENST00000550559 CABLES1Q8TDN4 633 aa23.37■■□□□ 1.33
TSFM-210ENST00000550559 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
TSFM-210ENST00000550559 ATRNO75882 1429 aa23.35■■□□□ 1.33
TSFM-210ENST00000550559 BRD4O60885 1362 aaPredicted RBP23.35■■□□□ 1.33
TSFM-210ENST00000550559 SLIT2O94813 1529 aa23.34■■□□□ 1.33
TSFM-210ENST00000550559 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.34■■□□□ 1.33
TSFM-210ENST00000550559 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
TSFM-210ENST00000550559 ATAD2Q6PL18 1390 aa23.34■■□□□ 1.33
TSFM-210ENST00000550559 BCL9LQ86UU0 1499 aa23.33■■□□□ 1.33
TSFM-210ENST00000550559 UNC5CLQ8IV45 518 aa23.31■■□□□ 1.32
TSFM-210ENST00000550559 CABP1Q9NZU7 370 aa23.31■■□□□ 1.32
TSFM-210ENST00000550559 RGS12O14924 1447 aa23.3■■□□□ 1.32
TSFM-210ENST00000550559 NWD2Q9ULI1 1742 aa23.3■■□□□ 1.32
TSFM-210ENST00000550559 CRYBG1Q9Y4K1 1723 aa23.29■■□□□ 1.32
TSFM-210ENST00000550559 PLCH1Q4KWH8 1693 aa23.28■■□□□ 1.32
TSFM-210ENST00000550559 USP6P35125 1406 aa23.28■■□□□ 1.32
TSFM-210ENST00000550559 ABTB2Q8N961 1025 aa23.27■■□□□ 1.32
TSFM-210ENST00000550559 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
TSFM-210ENST00000550559 COL14A1Q05707 1796 aaKnown RBP23.25■■□□□ 1.31
TSFM-210ENST00000550559 GJD4Q96KN9 370 aaPredicted RBP23.25■■□□□ 1.31
TSFM-210ENST00000550559 PHRF1Q9P1Y6 1649 aaKnown RBP23.25■■□□□ 1.31
TSFM-210ENST00000550559 FAM83GA6ND36 823 aa23.24■■□□□ 1.31
TSFM-210ENST00000550559 NLRP13Q86W25 1043 aa23.24■■□□□ 1.31
TSFM-210ENST00000550559 ZNF692Q9BU19 519 aaPredicted RBP23.24■■□□□ 1.31
TSFM-210ENST00000550559 PRDM11Q9NQV5 511 aa23.24■■□□□ 1.31
TSFM-210ENST00000550559 NUTM2GQ5VZR2 741 aa23.23■■□□□ 1.31
TSFM-210ENST00000550559 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
TSFM-210ENST00000550559 VPS72Q15906 364 aa23.22■■□□□ 1.31
TSFM-210ENST00000550559 USP19O94966 1318 aa23.22■■□□□ 1.31
TSFM-210ENST00000550559 PUS7Q96PZ0 661 aaKnown RBP23.21■■□□□ 1.31
TSFM-210ENST00000550559 BTG4Q9NY30 223 aa23.2■■□□□ 1.3
TSFM-210ENST00000550559 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
TSFM-210ENST00000550559 NRKQ7Z2Y5 1582 aa23.19■■□□□ 1.3
TSFM-210ENST00000550559 KIAA0232Q92628 1395 aa23.19■■□□□ 1.3
TSFM-210ENST00000550559 ST20-MTHFSA0A0A6YYL1 179 aa23.19■■□□□ 1.3
TSFM-210ENST00000550559 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
TSFM-210ENST00000550559 GLI3P10071 1580 aa23.18■■□□□ 1.3
TSFM-210ENST00000550559 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
TSFM-210ENST00000550559 SSH2Q76I76 1423 aa23.18■■□□□ 1.3
TSFM-210ENST00000550559 USP47Q96K76 1375 aa23.18■■□□□ 1.3
TSFM-210ENST00000550559 NRAPQ86VF7 1730 aa23.18■■□□□ 1.3
TSFM-210ENST00000550559 TTC21AQ8NDW8 1320 aa23.17■■□□□ 1.3
TSFM-210ENST00000550559 KTN1Q86UP2 1357 aaKnown RBP23.16■■□□□ 1.3
TSFM-210ENST00000550559 NLRP6P59044 892 aa23.16■■□□□ 1.3
TSFM-210ENST00000550559 ZC3H6P61129 1189 aaKnown RBP23.16■■□□□ 1.3
TSFM-210ENST00000550559 TESK2Q96S53 571 aa23.16■■□□□ 1.3
TSFM-210ENST00000550559 CPDO75976 1380 aa23.15■■□□□ 1.3
TSFM-210ENST00000550559 NINLQ9Y2I6 1382 aa23.15■■□□□ 1.3
TSFM-210ENST00000550559 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
TSFM-210ENST00000550559 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
TSFM-210ENST00000550559 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
TSFM-210ENST00000550559 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
TSFM-210ENST00000550559 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
TSFM-210ENST00000550559 GCP02774 474 aa23.13■■□□□ 1.29
TSFM-210ENST00000550559 MON2Q7Z3U7 1717 aa23.13■■□□□ 1.29
TSFM-210ENST00000550559 SLIT3O75094 1523 aa23.13■■□□□ 1.29
TSFM-210ENST00000550559 CHRNA2Q15822 529 aa23.12■■□□□ 1.29
TSFM-210ENST00000550559 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
TSFM-210ENST00000550559 TMF1P82094 1093 aa23.11■■□□□ 1.29
TSFM-210ENST00000550559 CD163L1Q9NR16 1453 aa23.09■■□□□ 1.29
TSFM-210ENST00000550559 EDC4Q6P2E9 1401 aaKnown RBP23.08■■□□□ 1.29
TSFM-210ENST00000550559 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
TSFM-210ENST00000550559 KCNH5Q8NCM2 988 aa23.08■■□□□ 1.29
TSFM-210ENST00000550559 SLC12A5Q9H2X9 1139 aa23.08■■□□□ 1.29
TSFM-210ENST00000550559 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.28
TSFM-210ENST00000550559 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.28
TSFM-210ENST00000550559 A0A0G2JS52 829 aa23.07■■□□□ 1.28
TSFM-210ENST00000550559 ONECUT3O60422 494 aaPredicted RBP23.07■■□□□ 1.28
TSFM-210ENST00000550559 MYT1Q01538 1121 aa23.07■■□□□ 1.28
TSFM-210ENST00000550559 SEPT12Q8IYM1 358 aa23.07■■□□□ 1.28
TSFM-210ENST00000550559 STRN4Q9NRL3 753 aa23.07■■□□□ 1.28
TSFM-210ENST00000550559 A0A1W2PP64 1363 aa23.06■■□□□ 1.28
TSFM-210ENST00000550559 EVA1CP58658 441 aa23.06■■□□□ 1.28
TSFM-210ENST00000550559 LMO7Q8WWI1 1683 aa23.06■■□□□ 1.28
TSFM-210ENST00000550559 AATKQ6ZMQ8 1374 aa23.04■■□□□ 1.28
TSFM-210ENST00000550559 FAM98CQ17RN3 349 aaKnown RBP23.04■■□□□ 1.28
TSFM-210ENST00000550559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.04■■□□□ 1.28
TSFM-210ENST00000550559 CAMTA1Q9Y6Y1 1673 aa23.03■■□□□ 1.28
TSFM-210ENST00000550559 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
TSFM-210ENST00000550559 ZBTB7CA1YPR0 619 aa23.03■■□□□ 1.28
TSFM-210ENST00000550559 SPATA31A1Q5TZJ5 1347 aa23.03■■□□□ 1.28
TSFM-210ENST00000550559 USP54Q70EL1 1684 aa23.02■■□□□ 1.28
TSFM-210ENST00000550559 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
TSFM-210ENST00000550559 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
TSFM-210ENST00000550559 COL5A2P05997 1499 aaPredicted RBP23■■□□□ 1.27
TSFM-210ENST00000550559 ANKRD36BQ8N2N9 1353 aa23■■□□□ 1.27
TSFM-210ENST00000550559 NME9Q86XW9 330 aa22.99■■□□□ 1.27
TSFM-210ENST00000550559 CCDC125Q86Z20 511 aa22.99■■□□□ 1.27
TSFM-210ENST00000550559 NFAT5O94916 1531 aa22.98■■□□□ 1.27
TSFM-210ENST00000550559 THSD7AQ9UPZ6 1657 aa22.98■■□□□ 1.27
TSFM-210ENST00000550559 SOX12O15370 315 aa22.98■■□□□ 1.27
TSFM-210ENST00000550559 ARHGEF25Q86VW2 580 aa22.98■■□□□ 1.27
TSFM-210ENST00000550559 ABCC6O95255 1503 aa22.98■■□□□ 1.27
TSFM-210ENST00000550559 LARP1Q6PKG0 1096 aaKnown RBP22.96■■□□□ 1.27
TSFM-210ENST00000550559 THRAP3Q9Y2W1 955 aaKnown RBP22.96■■□□□ 1.27
TSFM-210ENST00000550559 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
TSFM-210ENST00000550559 EIF4G2P78344 907 aaKnown RBP eCLIP22.95■■□□□ 1.26
TSFM-210ENST00000550559 CRB1P82279 1406 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms