RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
PFDN5-210ENST00000550513 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
PFDN5-210ENST00000550513 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
PFDN5-210ENST00000550513 SRCAPQ6ZRS2 3230 aa15.86■□□□□ 0.13
PFDN5-210ENST00000550513 HRCP23327 699 aa15.86■□□□□ 0.13
PFDN5-210ENST00000550513 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
PFDN5-210ENST00000550513 SEPT12Q8IYM1 358 aa15.85■□□□□ 0.13
PFDN5-210ENST00000550513 NGDNQ8NEJ9 315 aaKnown RBP15.84■□□□□ 0.13
PFDN5-210ENST00000550513 LRP5O75197 1615 aa15.83■□□□□ 0.13
PFDN5-210ENST00000550513 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
PFDN5-210ENST00000550513 A0A0G2JS52 829 aa15.82■□□□□ 0.12
PFDN5-210ENST00000550513 MYT1Q01538 1121 aa15.82■□□□□ 0.12
PFDN5-210ENST00000550513 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
PFDN5-210ENST00000550513 TRPM1Q7Z4N2 1603 aa15.82■□□□□ 0.12
PFDN5-210ENST00000550513 LMO7Q8WWI1 1683 aa15.82■□□□□ 0.12
PFDN5-210ENST00000550513 PAK3O75914 559 aaPredicted RBP15.81■□□□□ 0.12
PFDN5-210ENST00000550513 SF3B2Q13435 895 aaKnown RBP15.81■□□□□ 0.12
PFDN5-210ENST00000550513 KRT27Q7Z3Y8 459 aa15.81■□□□□ 0.12
PFDN5-210ENST00000550513 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
PFDN5-210ENST00000550513 ONECUT3O60422 494 aaPredicted RBP15.8■□□□□ 0.12
PFDN5-210ENST00000550513 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
PFDN5-210ENST00000550513 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
PFDN5-210ENST00000550513 AKAP12Q02952 1782 aa15.78■□□□□ 0.12
PFDN5-210ENST00000550513 FAM98CQ17RN3 349 aaKnown RBP15.78■□□□□ 0.12
PFDN5-210ENST00000550513 DEFB132Q7Z7B7 95 aa15.78■□□□□ 0.12
PFDN5-210ENST00000550513 PRDM11Q9NQV5 511 aa15.78■□□□□ 0.12
PFDN5-210ENST00000550513 KIAA0232Q92628 1395 aa15.77■□□□□ 0.12
PFDN5-210ENST00000550513 PARP4Q9UKK3 1724 aaKnown RBP15.77■□□□□ 0.11
PFDN5-210ENST00000550513 RREB1Q92766 1687 aa15.76■□□□□ 0.11
PFDN5-210ENST00000550513 SPATA31A5Q5VU36 1347 aa15.76■□□□□ 0.11
PFDN5-210ENST00000550513 SPATA31A7Q8IWB4 1347 aa15.76■□□□□ 0.11
PFDN5-210ENST00000550513 CDK19Q9BWU1 502 aa15.76■□□□□ 0.11
PFDN5-210ENST00000550513 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
PFDN5-210ENST00000550513 PPIP5K1Q6PFW1 1433 aa15.75■□□□□ 0.11
PFDN5-210ENST00000550513 ACEP12821 1306 aa15.74■□□□□ 0.11
PFDN5-210ENST00000550513 RGPD5Q99666 1765 aa15.73■□□□□ 0.11
PFDN5-210ENST00000550513 NUP188Q5SRE5 1749 aa15.73■□□□□ 0.11
PFDN5-210ENST00000550513 CAMTA1Q9Y6Y1 1673 aa15.73■□□□□ 0.11
PFDN5-210ENST00000550513 SSH2Q76I76 1423 aa15.72■□□□□ 0.11
PFDN5-210ENST00000550513 BAG6P46379 1132 aa15.72■□□□□ 0.11
PFDN5-210ENST00000550513 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
PFDN5-210ENST00000550513 SPATA31A1Q5TZJ5 1347 aa15.71■□□□□ 0.11
PFDN5-210ENST00000550513 CENPJQ9HC77 1338 aaPredicted RBP15.71■□□□□ 0.11
PFDN5-210ENST00000550513 SBF2Q86WG5 1849 aa15.71■□□□□ 0.11
PFDN5-210ENST00000550513 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
PFDN5-210ENST00000550513 NBPF1Q3BBV0 1214 aa15.71■□□□□ 0.11
PFDN5-210ENST00000550513 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
PFDN5-210ENST00000550513 LRRC37A3O60309 1634 aa15.71■□□□□ 0.11
PFDN5-210ENST00000550513 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.1
PFDN5-210ENST00000550513 DISP2A7MBM2 1401 aa15.7■□□□□ 0.1
PFDN5-210ENST00000550513 SLIT3O75094 1523 aa15.7■□□□□ 0.1
PFDN5-210ENST00000550513 PLEKHG3A1L390 1219 aa15.7■□□□□ 0.1
PFDN5-210ENST00000550513 SRPK2P78362 688 aaKnown RBP15.7■□□□□ 0.1
PFDN5-210ENST00000550513 NBPF8Q3BBV2 869 aa15.7■□□□□ 0.1
PFDN5-210ENST00000550513 STRN4Q9NRL3 753 aa15.7■□□□□ 0.1
PFDN5-210ENST00000550513 COL18A1P39060 1754 aa15.7■□□□□ 0.1
PFDN5-210ENST00000550513 USP19O94966 1318 aa15.69■□□□□ 0.1
PFDN5-210ENST00000550513 ZC3H6P61129 1189 aaKnown RBP15.69■□□□□ 0.1
PFDN5-210ENST00000550513 FAM182BQ5T319 152 aa15.69■□□□□ 0.1
PFDN5-210ENST00000550513 CPDO75976 1380 aa15.69■□□□□ 0.1
PFDN5-210ENST00000550513 RGPD3A6NKT7 1758 aaPredicted RBP15.69■□□□□ 0.1
PFDN5-210ENST00000550513 RGPD4Q7Z3J3 1758 aa15.69■□□□□ 0.1
PFDN5-210ENST00000550513 COL5A2P05997 1499 aaPredicted RBP15.68■□□□□ 0.1
PFDN5-210ENST00000550513 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
PFDN5-210ENST00000550513 USP6P35125 1406 aa15.68■□□□□ 0.1
PFDN5-210ENST00000550513 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
PFDN5-210ENST00000550513 PEAK1Q9H792 1746 aa15.66■□□□□ 0.1
PFDN5-210ENST00000550513 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
PFDN5-210ENST00000550513 LTN1O94822 1766 aa15.65■□□□□ 0.1
PFDN5-210ENST00000550513 USP54Q70EL1 1684 aa15.65■□□□□ 0.1
PFDN5-210ENST00000550513 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
PFDN5-210ENST00000550513 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-210ENST00000550513 EVA1CP58658 441 aa15.64■□□□□ 0.09
PFDN5-210ENST00000550513 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-210ENST00000550513 NLRP13Q86W25 1043 aa15.64■□□□□ 0.09
PFDN5-210ENST00000550513 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
PFDN5-210ENST00000550513 CRB1P82279 1406 aa15.62■□□□□ 0.09
PFDN5-210ENST00000550513 LARP1Q6PKG0 1096 aaKnown RBP15.62■□□□□ 0.09
PFDN5-210ENST00000550513 FAM196AQ6ZSG2 479 aa15.62■□□□□ 0.09
PFDN5-210ENST00000550513 BARGINQ6ZT62 677 aa15.62■□□□□ 0.09
PFDN5-210ENST00000550513 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
PFDN5-210ENST00000550513 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
PFDN5-210ENST00000550513 GCP02774 474 aa15.61■□□□□ 0.09
PFDN5-210ENST00000550513 EVC2Q86UK5 1308 aa15.61■□□□□ 0.09
PFDN5-210ENST00000550513 TRIM37O94972 964 aa15.6■□□□□ 0.09
PFDN5-210ENST00000550513 TCP11L2Q8N4U5 519 aa15.6■□□□□ 0.09
PFDN5-210ENST00000550513 PDE3BQ13370 1112 aa15.59■□□□□ 0.09
PFDN5-210ENST00000550513 EZH2Q15910 746 aaKnown RBP15.59■□□□□ 0.09
PFDN5-210ENST00000550513 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
PFDN5-210ENST00000550513 CPSF1Q10570 1443 aaKnown RBP15.59■□□□□ 0.09
PFDN5-210ENST00000550513 ABCC6O95255 1503 aa15.58■□□□□ 0.09
PFDN5-210ENST00000550513 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
PFDN5-210ENST00000550513 THRAP3Q9Y2W1 955 aaKnown RBP15.58■□□□□ 0.08
PFDN5-210ENST00000550513 OVOS2A0A0G2JMS6 1433 aa15.58■□□□□ 0.08
PFDN5-210ENST00000550513 OVOS2A0A0J9YW53 1432 aa15.58■□□□□ 0.08
PFDN5-210ENST00000550513 OVOS2Q6IE36 1432 aa15.58■□□□□ 0.08
PFDN5-210ENST00000550513 NFAT5O94916 1531 aa15.58■□□□□ 0.08
PFDN5-210ENST00000550513 NLRP6P59044 892 aa15.57■□□□□ 0.08
PFDN5-210ENST00000550513 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
PFDN5-210ENST00000550513 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms