RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
CACNB3-217ENST00000550483 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
CACNB3-217ENST00000550483 BLMP54132 1417 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-217ENST00000550483 XIRP1Q702N8 1843 aaKnown RBP16.8■□□□□ 0.28
CACNB3-217ENST00000550483 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
CACNB3-217ENST00000550483 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
CACNB3-217ENST00000550483 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
CACNB3-217ENST00000550483 FYB1O15117 783 aa16.79■□□□□ 0.28
CACNB3-217ENST00000550483 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
CACNB3-217ENST00000550483 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
CACNB3-217ENST00000550483 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.28
CACNB3-217ENST00000550483 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
CACNB3-217ENST00000550483 PROSER2Q86WR7 435 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-217ENST00000550483 USP6P35125 1406 aa16.77■□□□□ 0.27
CACNB3-217ENST00000550483 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
CACNB3-217ENST00000550483 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
CACNB3-217ENST00000550483 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
CACNB3-217ENST00000550483 DCCP43146 1447 aa16.75■□□□□ 0.27
CACNB3-217ENST00000550483 ACEP12821 1306 aa16.74■□□□□ 0.27
CACNB3-217ENST00000550483 PDE3BQ13370 1112 aa16.74■□□□□ 0.27
CACNB3-217ENST00000550483 COG3Q96JB2 828 aa16.73■□□□□ 0.27
CACNB3-217ENST00000550483 GGNBP2Q9H3C7 697 aa16.73■□□□□ 0.27
CACNB3-217ENST00000550483 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
CACNB3-217ENST00000550483 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
CACNB3-217ENST00000550483 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
CACNB3-217ENST00000550483 MTHFSP49914 203 aa16.71■□□□□ 0.27
CACNB3-217ENST00000550483 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CACNB3-217ENST00000550483 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
CACNB3-217ENST00000550483 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
CACNB3-217ENST00000550483 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
CACNB3-217ENST00000550483 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
CACNB3-217ENST00000550483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNB3-217ENST00000550483 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
CACNB3-217ENST00000550483 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
CACNB3-217ENST00000550483 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
CACNB3-217ENST00000550483 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CACNB3-217ENST00000550483 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
CACNB3-217ENST00000550483 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
CACNB3-217ENST00000550483 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
CACNB3-217ENST00000550483 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
CACNB3-217ENST00000550483 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
CACNB3-217ENST00000550483 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-217ENST00000550483 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-217ENST00000550483 JCADQ9P266 1359 aa16.66■□□□□ 0.26
CACNB3-217ENST00000550483 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
CACNB3-217ENST00000550483 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
CACNB3-217ENST00000550483 NME9Q86XW9 330 aa16.66■□□□□ 0.26
CACNB3-217ENST00000550483 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
CACNB3-217ENST00000550483 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
CACNB3-217ENST00000550483 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-217ENST00000550483 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
CACNB3-217ENST00000550483 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
CACNB3-217ENST00000550483 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
CACNB3-217ENST00000550483 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
CACNB3-217ENST00000550483 MSH6P52701 1360 aa16.63■□□□□ 0.25
CACNB3-217ENST00000550483 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
CACNB3-217ENST00000550483 ATF3P18847 181 aa16.62■□□□□ 0.25
CACNB3-217ENST00000550483 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-217ENST00000550483 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
CACNB3-217ENST00000550483 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
CACNB3-217ENST00000550483 LRP6O75581 1613 aa16.62■□□□□ 0.25
CACNB3-217ENST00000550483 RXRBP28702 533 aa16.61■□□□□ 0.25
CACNB3-217ENST00000550483 PHLPP1O60346 1717 aa16.61■□□□□ 0.25
CACNB3-217ENST00000550483 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-217ENST00000550483 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
CACNB3-217ENST00000550483 NEFLP07196 543 aa16.6■□□□□ 0.25
CACNB3-217ENST00000550483 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
CACNB3-217ENST00000550483 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-217ENST00000550483 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-217ENST00000550483 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
CACNB3-217ENST00000550483 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-217ENST00000550483 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-217ENST00000550483 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACNB3-217ENST00000550483 MST1RQ04912 1400 aa16.58■□□□□ 0.24
CACNB3-217ENST00000550483 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
CACNB3-217ENST00000550483 NEFMP07197 916 aa16.57■□□□□ 0.24
CACNB3-217ENST00000550483 PSME1Q06323 249 aa16.57■□□□□ 0.24
CACNB3-217ENST00000550483 SPATA31A6Q5VVP1 1343 aa16.56■□□□□ 0.24
CACNB3-217ENST00000550483 FCHSD2O94868 740 aa16.56■□□□□ 0.24
CACNB3-217ENST00000550483 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
CACNB3-217ENST00000550483 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
CACNB3-217ENST00000550483 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
CACNB3-217ENST00000550483 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
CACNB3-217ENST00000550483 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
CACNB3-217ENST00000550483 FLT4P35916 1363 aa16.54■□□□□ 0.24
CACNB3-217ENST00000550483 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
CACNB3-217ENST00000550483 NLRP6P59044 892 aa16.54■□□□□ 0.24
CACNB3-217ENST00000550483 ABTB2Q8N961 1025 aa16.54■□□□□ 0.24
CACNB3-217ENST00000550483 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
CACNB3-217ENST00000550483 COL16A1Q07092 1604 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-217ENST00000550483 APAF1O14727 1248 aa16.53■□□□□ 0.24
CACNB3-217ENST00000550483 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
CACNB3-217ENST00000550483 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
CACNB3-217ENST00000550483 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
CACNB3-217ENST00000550483 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
CACNB3-217ENST00000550483 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
CACNB3-217ENST00000550483 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
CACNB3-217ENST00000550483 AFF2P51816 1311 aa16.51■□□□□ 0.23
CACNB3-217ENST00000550483 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-217ENST00000550483 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms