RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 EP400Q96L91 3159 aa33.48■■■□□ 2.95
SMARCD1-209ENST00000550477 ALS2Q96Q42 1657 aa33.48■■■□□ 2.95
SMARCD1-209ENST00000550477 PRDM11Q9NQV5 511 aa33.47■■■□□ 2.95
SMARCD1-209ENST00000550477 ITSN1Q15811 1721 aa33.46■■■□□ 2.95
SMARCD1-209ENST00000550477 FAM98CQ17RN3 349 aaKnown RBP33.46■■■□□ 2.95
SMARCD1-209ENST00000550477 CDK19Q9BWU1 502 aa33.46■■■□□ 2.95
SMARCD1-209ENST00000550477 COL14A1Q05707 1796 aaKnown RBP33.46■■■□□ 2.95
SMARCD1-209ENST00000550477 DEFB132Q7Z7B7 95 aa33.44■■■□□ 2.94
SMARCD1-209ENST00000550477 ARHGEF28Q8N1W1 1705 aaKnown RBP33.44■■■□□ 2.94
SMARCD1-209ENST00000550477 CCDC61Q9Y6R9 512 aa33.42■■■□□ 2.94
SMARCD1-209ENST00000550477 BAG6P46379 1132 aa33.41■■■□□ 2.94
SMARCD1-209ENST00000550477 ATP7BP35670 1465 aa33.39■■■□□ 2.94
SMARCD1-209ENST00000550477 SPATA31A5Q5VU36 1347 aa33.38■■■□□ 2.93
SMARCD1-209ENST00000550477 SPATA31A7Q8IWB4 1347 aa33.38■■■□□ 2.93
SMARCD1-209ENST00000550477 NRAPQ86VF7 1730 aa33.38■■■□□ 2.93
SMARCD1-209ENST00000550477 NBPF8Q3BBV2 869 aa33.36■■■□□ 2.93
SMARCD1-209ENST00000550477 KIAA1210Q9ULL0 1709 aa33.36■■■□□ 2.93
SMARCD1-209ENST00000550477 ACEP12821 1306 aa33.34■■■□□ 2.93
SMARCD1-209ENST00000550477 PLEKHG3A1L390 1219 aa33.34■■■□□ 2.93
SMARCD1-209ENST00000550477 POLR3AO14802 1390 aaPredicted RBP33.32■■■□□ 2.92
SMARCD1-209ENST00000550477 KIAA0232Q92628 1395 aa33.32■■■□□ 2.92
SMARCD1-209ENST00000550477 EVA1CP58658 441 aa33.31■■■□□ 2.92
SMARCD1-209ENST00000550477 ZC3H6P61129 1189 aaKnown RBP33.31■■■□□ 2.92
SMARCD1-209ENST00000550477 SRPK2P78362 688 aaKnown RBP33.31■■■□□ 2.92
SMARCD1-209ENST00000550477 ABTB2Q8N961 1025 aa33.31■■■□□ 2.92
SMARCD1-209ENST00000550477 NUTM2GQ5VZR2 741 aa33.3■■■□□ 2.92
SMARCD1-209ENST00000550477 STRN4Q9NRL3 753 aa33.3■■■□□ 2.92
SMARCD1-209ENST00000550477 NBPF1Q3BBV0 1214 aa33.29■■■□□ 2.92
SMARCD1-209ENST00000550477 CHRNA2Q15822 529 aa33.28■■■□□ 2.92
SMARCD1-209ENST00000550477 CRYBG1Q9Y4K1 1723 aa33.28■■■□□ 2.92
SMARCD1-209ENST00000550477 SPATA31A1Q5TZJ5 1347 aa33.27■■■□□ 2.92
SMARCD1-209ENST00000550477 CENPJQ9HC77 1338 aaPredicted RBP33.27■■■□□ 2.92
SMARCD1-209ENST00000550477 NLRP13Q86W25 1043 aa33.25■■■□□ 2.91
SMARCD1-209ENST00000550477 FAM196AQ6ZSG2 479 aa33.22■■■□□ 2.91
SMARCD1-209ENST00000550477 TOPAZ1Q8N9V7 1692 aa33.21■■■□□ 2.91
SMARCD1-209ENST00000550477 PHRF1Q9P1Y6 1649 aaKnown RBP33.2■■■□□ 2.91
SMARCD1-209ENST00000550477 FAM182BQ5T319 152 aa33.2■■■□□ 2.91
SMARCD1-209ENST00000550477 USP35Q9P2H5 1018 aa33.2■■■□□ 2.91
SMARCD1-209ENST00000550477 BRD4O60885 1362 aaPredicted RBP33.2■■■□□ 2.9
SMARCD1-209ENST00000550477 EN1Q05925 392 aaPredicted RBP33.19■■■□□ 2.9
SMARCD1-209ENST00000550477 SRCAPQ6ZRS2 3230 aa33.19■■■□□ 2.9
SMARCD1-209ENST00000550477 RGPD1P0DJD0 1748 aa33.19■■■□□ 2.9
SMARCD1-209ENST00000550477 PPIP5K1Q6PFW1 1433 aa33.19■■■□□ 2.9
SMARCD1-209ENST00000550477 CABP2Q9NPB3 220 aa33.18■■■□□ 2.9
SMARCD1-209ENST00000550477 PDE3BQ13370 1112 aa33.17■■■□□ 2.9
SMARCD1-209ENST00000550477 THSD7AQ9UPZ6 1657 aa33.17■■■□□ 2.9
SMARCD1-209ENST00000550477 BARGINQ6ZT62 677 aa33.16■■■□□ 2.9
SMARCD1-209ENST00000550477 CPDO75976 1380 aa33.14■■■□□ 2.9
SMARCD1-209ENST00000550477 GCP02774 474 aa33.14■■■□□ 2.9
SMARCD1-209ENST00000550477 SSH2Q76I76 1423 aa33.12■■■□□ 2.89
SMARCD1-209ENST00000550477 USP19O94966 1318 aa33.12■■■□□ 2.89
SMARCD1-209ENST00000550477 PSDA5PKW4 1024 aaPredicted RBP33.12■■■□□ 2.89
SMARCD1-209ENST00000550477 TCP11L2Q8N4U5 519 aa33.12■■■□□ 2.89
SMARCD1-209ENST00000550477 L3MBTL2Q969R5 705 aa33.11■■■□□ 2.89
SMARCD1-209ENST00000550477 THRAP3Q9Y2W1 955 aaKnown RBP33.11■■■□□ 2.89
SMARCD1-209ENST00000550477 EVC2Q86UK5 1308 aa33.1■■■□□ 2.89
SMARCD1-209ENST00000550477 CABP1Q9NZU7 370 aa33.1■■■□□ 2.89
SMARCD1-209ENST00000550477 DISP2A7MBM2 1401 aa33.1■■■□□ 2.89
SMARCD1-209ENST00000550477 TRIM37O94972 964 aa33.09■■■□□ 2.89
SMARCD1-209ENST00000550477 NLRP6P59044 892 aa33.09■■■□□ 2.89
SMARCD1-209ENST00000550477 LARP1Q6PKG0 1096 aaKnown RBP33.09■■■□□ 2.89
SMARCD1-209ENST00000550477 NRKQ7Z2Y5 1582 aa33.07■■■□□ 2.88
SMARCD1-209ENST00000550477 APBA3O96018 575 aa33.06■■■□□ 2.88
SMARCD1-209ENST00000550477 QRICH2Q9H0J4 1663 aa33.06■■■□□ 2.88
SMARCD1-209ENST00000550477 CAMTA1Q9Y6Y1 1673 aa33.05■■■□□ 2.88
SMARCD1-209ENST00000550477 C11orf95C9JLR9 678 aaPredicted RBP33.05■■■□□ 2.88
SMARCD1-209ENST00000550477 ZBTB7CA1YPR0 619 aa33.04■■■□□ 2.88
SMARCD1-209ENST00000550477 EZH2Q15910 746 aaKnown RBP33.04■■■□□ 2.88
SMARCD1-209ENST00000550477 ZNF692Q9BU19 519 aaPredicted RBP33.03■■■□□ 2.88
SMARCD1-209ENST00000550477 LRP5O75197 1615 aa33.02■■■□□ 2.88
SMARCD1-209ENST00000550477 PARD3Q8TEW0 1356 aa33.02■■■□□ 2.88
SMARCD1-209ENST00000550477 NEUROD1Q13562 356 aa33.02■■■□□ 2.88
SMARCD1-209ENST00000550477 USP6P35125 1406 aa33.02■■■□□ 2.88
SMARCD1-209ENST00000550477 R3HDM1Q15032 1099 aaKnown RBP33.01■■■□□ 2.87
SMARCD1-209ENST00000550477 CAMKK2Q96RR4 588 aa33■■■□□ 2.87
SMARCD1-209ENST00000550477 ROCK2O75116 1388 aaKnown RBP32.99■■■□□ 2.87
SMARCD1-209ENST00000550477 SIN3AQ96ST3 1273 aa32.99■■■□□ 2.87
SMARCD1-209ENST00000550477 TNS1Q9HBL0 1735 aaKnown RBP32.99■■■□□ 2.87
SMARCD1-209ENST00000550477 LMO7Q8WWI1 1683 aa32.98■■■□□ 2.87
SMARCD1-209ENST00000550477 NBPF14Q5TI25 921 aa32.96■■■□□ 2.87
SMARCD1-209ENST00000550477 AATKQ6ZMQ8 1374 aa32.96■■■□□ 2.87
SMARCD1-209ENST00000550477 CRB1P82279 1406 aa32.95■■■□□ 2.87
SMARCD1-209ENST00000550477 COL5A2P05997 1499 aaPredicted RBP32.95■■■□□ 2.87
SMARCD1-209ENST00000550477 KCNH5Q8NCM2 988 aa32.95■■■□□ 2.87
SMARCD1-209ENST00000550477 TOM1L2Q6ZVM7 507 aa32.94■■■□□ 2.86
SMARCD1-209ENST00000550477 TRPM1Q7Z4N2 1603 aa32.91■■■□□ 2.86
SMARCD1-209ENST00000550477 TTC21AQ8NDW8 1320 aa32.89■■■□□ 2.86
SMARCD1-209ENST00000550477 SLIT3O75094 1523 aa32.88■■■□□ 2.85
SMARCD1-209ENST00000550477 TTC21BQ7Z4L5 1316 aa32.88■■■□□ 2.85
SMARCD1-209ENST00000550477 DDB1Q16531 1140 aa32.88■■■□□ 2.85
SMARCD1-209ENST00000550477 CDCA7Q9BWT1 371 aaPredicted RBP32.87■■■□□ 2.85
SMARCD1-209ENST00000550477 PARP4Q9UKK3 1724 aaKnown RBP32.85■■■□□ 2.85
SMARCD1-209ENST00000550477 CSB-PGBD3P0DP91 1061 aa32.84■■■□□ 2.85
SMARCD1-209ENST00000550477 OVOS2A0A0G2JMS6 1433 aa32.84■■■□□ 2.85
SMARCD1-209ENST00000550477 OVOS2A0A0J9YW53 1432 aa32.84■■■□□ 2.85
SMARCD1-209ENST00000550477 OVOS2Q6IE36 1432 aa32.84■■■□□ 2.85
SMARCD1-209ENST00000550477 WDR17Q8IZU2 1322 aa32.83■■■□□ 2.85
SMARCD1-209ENST00000550477 ARHGEF25Q86VW2 580 aa32.82■■■□□ 2.84
SMARCD1-209ENST00000550477 KTN1Q86UP2 1357 aaKnown RBP32.82■■■□□ 2.84
SMARCD1-209ENST00000550477 PIK3C2AO00443 1686 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms