RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 RGPD5Q99666 1765 aa10.1□□□□□ -0.79
CBX5-204ENST00000550411 LRP5O75197 1615 aa10.1□□□□□ -0.79
CBX5-204ENST00000550411 SPATA31A3Q5VYP0 1347 aa10.09□□□□□ -0.79
CBX5-204ENST00000550411 TNS3Q68CZ2 1445 aa10.09□□□□□ -0.79
CBX5-204ENST00000550411 KIAA1210Q9ULL0 1709 aa10.09□□□□□ -0.79
CBX5-204ENST00000550411 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
CBX5-204ENST00000550411 KRT28Q7Z3Y7 464 aa10.08□□□□□ -0.8
CBX5-204ENST00000550411 UNC5CLQ8IV45 518 aa10.08□□□□□ -0.8
CBX5-204ENST00000550411 SIRT1Q96EB6 747 aa10.08□□□□□ -0.8
CBX5-204ENST00000550411 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
CBX5-204ENST00000550411 ZRANB1Q9UGI0 708 aa10.08□□□□□ -0.8
CBX5-204ENST00000550411 WNK3Q9BYP7 1800 aa10.07□□□□□ -0.8
CBX5-204ENST00000550411 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
CBX5-204ENST00000550411 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
CBX5-204ENST00000550411 AKAP12Q02952 1782 aa10.06□□□□□ -0.8
CBX5-204ENST00000550411 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
CBX5-204ENST00000550411 PSME1Q06323 249 aa10.06□□□□□ -0.8
CBX5-204ENST00000550411 PHF8Q9UPP1 1060 aa10.06□□□□□ -0.8
CBX5-204ENST00000550411 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
CBX5-204ENST00000550411 THSD7AQ9UPZ6 1657 aa10.06□□□□□ -0.8
CBX5-204ENST00000550411 SBNO1A3KN83 1393 aa10.05□□□□□ -0.8
CBX5-204ENST00000550411 ANKARQ7Z5J8 1434 aa10.05□□□□□ -0.8
CBX5-204ENST00000550411 RREB1Q92766 1687 aa10.05□□□□□ -0.8
CBX5-204ENST00000550411 ARHGEF10O15013 1369 aa10.04□□□□□ -0.8
CBX5-204ENST00000550411 TULP4Q9NRJ4 1543 aa10.04□□□□□ -0.8
CBX5-204ENST00000550411 C1QBPQ07021 282 aaKnown RBP10.04□□□□□ -0.8
CBX5-204ENST00000550411 CABLES1Q8TDN4 633 aa10.04□□□□□ -0.8
CBX5-204ENST00000550411 TRPM1Q7Z4N2 1603 aa10.04□□□□□ -0.8
CBX5-204ENST00000550411 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
CBX5-204ENST00000550411 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
CBX5-204ENST00000550411 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
CBX5-204ENST00000550411 LMOD2Q6P5Q4 547 aa10.03□□□□□ -0.8
CBX5-204ENST00000550411 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.8
CBX5-204ENST00000550411 VPS72Q15906 364 aa10.02□□□□□ -0.81
CBX5-204ENST00000550411 SEPT12Q8IYM1 358 aa10.02□□□□□ -0.81
CBX5-204ENST00000550411 DCAF11Q8TEB1 546 aa10.02□□□□□ -0.81
CBX5-204ENST00000550411 PRAM1Q96QH2 718 aa10.02□□□□□ -0.81
CBX5-204ENST00000550411 POGKQ9P215 609 aa10.02□□□□□ -0.81
CBX5-204ENST00000550411 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.81
CBX5-204ENST00000550411 SF3B2Q13435 895 aaKnown RBP10.01□□□□□ -0.81
CBX5-204ENST00000550411 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
CBX5-204ENST00000550411 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
CBX5-204ENST00000550411 PARP4Q9UKK3 1724 aaKnown RBP10.01□□□□□ -0.81
CBX5-204ENST00000550411 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
CBX5-204ENST00000550411 DEFB132Q7Z7B7 95 aa10□□□□□ -0.81
CBX5-204ENST00000550411 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
CBX5-204ENST00000550411 CHD4Q14839 1912 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
CBX5-204ENST00000550411 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 FAM83GA6ND36 823 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 KRT27Q7Z3Y8 459 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 TRAK1Q9UPV9 953 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 LMO7Q8WWI1 1683 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 GPRASP1Q5JY77 1395 aa9.99□□□□□ -0.81
CBX5-204ENST00000550411 ATP7BP35670 1465 aa9.98□□□□□ -0.81
CBX5-204ENST00000550411 NRKQ7Z2Y5 1582 aa9.98□□□□□ -0.81
CBX5-204ENST00000550411 A0A0G2JS52 829 aa9.98□□□□□ -0.81
CBX5-204ENST00000550411 MYT1Q01538 1121 aa9.98□□□□□ -0.81
CBX5-204ENST00000550411 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
CBX5-204ENST00000550411 STAC3Q96MF2 364 aa9.98□□□□□ -0.81
CBX5-204ENST00000550411 MINK1Q8N4C8 1332 aaPredicted RBP9.98□□□□□ -0.81
CBX5-204ENST00000550411 L3MBTL2Q969R5 705 aa9.97□□□□□ -0.81
CBX5-204ENST00000550411 HIRIP3Q9BW71 556 aaPredicted RBP9.97□□□□□ -0.81
CBX5-204ENST00000550411 BTG4Q9NY30 223 aa9.97□□□□□ -0.81
CBX5-204ENST00000550411 PRR36Q9H6K5 1346 aa9.97□□□□□ -0.81
CBX5-204ENST00000550411 LTN1O94822 1766 aa9.96□□□□□ -0.81
CBX5-204ENST00000550411 FAM98CQ17RN3 349 aaKnown RBP9.96□□□□□ -0.82
CBX5-204ENST00000550411 NBPF1Q3BBV0 1214 aa9.96□□□□□ -0.82
CBX5-204ENST00000550411 COL18A1P39060 1754 aa9.96□□□□□ -0.82
CBX5-204ENST00000550411 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
CBX5-204ENST00000550411 BAG6P46379 1132 aa9.95□□□□□ -0.82
CBX5-204ENST00000550411 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
CBX5-204ENST00000550411 SPATA31A5Q5VU36 1347 aa9.94□□□□□ -0.82
CBX5-204ENST00000550411 SPATA31A7Q8IWB4 1347 aa9.94□□□□□ -0.82
CBX5-204ENST00000550411 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
CBX5-204ENST00000550411 NGDNQ8NEJ9 315 aaKnown RBP9.94□□□□□ -0.82
CBX5-204ENST00000550411 PEAK1Q9H792 1746 aa9.93□□□□□ -0.82
CBX5-204ENST00000550411 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
CBX5-204ENST00000550411 PSDA5PKW4 1024 aaPredicted RBP9.92□□□□□ -0.82
CBX5-204ENST00000550411 NBPF8Q3BBV2 869 aa9.92□□□□□ -0.82
CBX5-204ENST00000550411 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
CBX5-204ENST00000550411 PIK3C2AO00443 1686 aa9.92□□□□□ -0.82
CBX5-204ENST00000550411 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
CBX5-204ENST00000550411 DISP2A7MBM2 1401 aa9.91□□□□□ -0.82
CBX5-204ENST00000550411 EN1Q05925 392 aaPredicted RBP9.91□□□□□ -0.82
CBX5-204ENST00000550411 NEUROD1Q13562 356 aa9.91□□□□□ -0.82
CBX5-204ENST00000550411 POLA2Q14181 598 aa9.91□□□□□ -0.82
CBX5-204ENST00000550411 FAM182BQ5T319 152 aa9.91□□□□□ -0.82
CBX5-204ENST00000550411 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
CBX5-204ENST00000550411 PRDM11Q9NQV5 511 aa9.91□□□□□ -0.82
CBX5-204ENST00000550411 KIAA0232Q92628 1395 aa9.9□□□□□ -0.82
CBX5-204ENST00000550411 SPATA31A1Q5TZJ5 1347 aa9.9□□□□□ -0.82
CBX5-204ENST00000550411 POLR3AO14802 1390 aaPredicted RBP9.89□□□□□ -0.83
CBX5-204ENST00000550411 CASZ1Q86V15 1759 aa9.89□□□□□ -0.83
CBX5-204ENST00000550411 CHRNA2Q15822 529 aa9.89□□□□□ -0.83
CBX5-204ENST00000550411 RGPD2P0DJD1 1756 aa9.88□□□□□ -0.83
CBX5-204ENST00000550411 CENPJQ9HC77 1338 aaPredicted RBP9.88□□□□□ -0.83
CBX5-204ENST00000550411 ZC3H6P61129 1189 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms