RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
HCFC2-204ENST00000550335 APLP1P51693 650 aa9.83□□□□□ -0.84
HCFC2-204ENST00000550335 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
HCFC2-204ENST00000550335 HS3ST6Q96QI5 342 aa9.83□□□□□ -0.84
HCFC2-204ENST00000550335 MTMR7Q9Y216 660 aa9.83□□□□□ -0.84
HCFC2-204ENST00000550335 PIK3CDO00329 1044 aa9.82□□□□□ -0.84
HCFC2-204ENST00000550335 NR1I2O75469 434 aa9.82□□□□□ -0.84
HCFC2-204ENST00000550335 SKIP12755 728 aa9.82□□□□□ -0.84
HCFC2-204ENST00000550335 KCNA1Q09470 495 aa9.82□□□□□ -0.84
HCFC2-204ENST00000550335 LSM11P83369 360 aaKnown RBP eCLIP9.81□□□□□ -0.84
HCFC2-204ENST00000550335 ATG7O95352 703 aa9.8□□□□□ -0.84
HCFC2-204ENST00000550335 JUNDP17535 347 aa9.8□□□□□ -0.84
HCFC2-204ENST00000550335 WNT2BQ93097 391 aa9.8□□□□□ -0.84
HCFC2-204ENST00000550335 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
HCFC2-204ENST00000550335 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
HCFC2-204ENST00000550335 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
HCFC2-204ENST00000550335 LHX8Q68G74 356 aa9.79□□□□□ -0.84
HCFC2-204ENST00000550335 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
HCFC2-204ENST00000550335 DEPDC4Q8N2C3 294 aa9.79□□□□□ -0.84
HCFC2-204ENST00000550335 FOXD4L5Q5VV16 416 aaPredicted RBP9.78□□□□□ -0.84
HCFC2-204ENST00000550335 FOXD4L4Q8WXT5 416 aaPredicted RBP9.78□□□□□ -0.84
HCFC2-204ENST00000550335 PCDHB9Q9Y5E1 797 aa9.78□□□□□ -0.84
HCFC2-204ENST00000550335 IVNS1ABPQ9Y6Y0 642 aa9.78□□□□□ -0.84
HCFC2-204ENST00000550335 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
HCFC2-204ENST00000550335 COPS2P61201 443 aa9.77□□□□□ -0.85
HCFC2-204ENST00000550335 PTPRNQ16849 979 aa9.77□□□□□ -0.85
HCFC2-204ENST00000550335 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
HCFC2-204ENST00000550335 RGS22Q8NE09 1264 aa9.76□□□□□ -0.85
HCFC2-204ENST00000550335 THAP11Q96EK4 314 aa9.76□□□□□ -0.85
HCFC2-204ENST00000550335 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 TMEM88BA6NKF7 163 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 HRO43593 1189 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 PTK2Q05397 1052 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 SLFNL1Q499Z3 407 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 KANK4Q5T7N3 995 aaPredicted RBP9.75□□□□□ -0.85
HCFC2-204ENST00000550335 USP17L2Q6R6M4 530 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 USP17L1Q7RTZ2 530 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 SPSB2Q99619 263 aa9.75□□□□□ -0.85
HCFC2-204ENST00000550335 USP17L5A8MUK1 530 aa9.74□□□□□ -0.85
HCFC2-204ENST00000550335 CCNYL3P0C7X3 344 aa9.74□□□□□ -0.85
HCFC2-204ENST00000550335 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
HCFC2-204ENST00000550335 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
HCFC2-204ENST00000550335 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
HCFC2-204ENST00000550335 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
HCFC2-204ENST00000550335 ARMC2Q8NEN0 867 aa9.73□□□□□ -0.85
HCFC2-204ENST00000550335 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
HCFC2-204ENST00000550335 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
HCFC2-204ENST00000550335 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
HCFC2-204ENST00000550335 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
HCFC2-204ENST00000550335 TMEM164Q5U3C3 297 aa9.72□□□□□ -0.85
HCFC2-204ENST00000550335 RNF135Q8IUD6 432 aa9.72□□□□□ -0.85
HCFC2-204ENST00000550335 FAM160A2Q8N612 972 aaPredicted RBP9.72□□□□□ -0.85
HCFC2-204ENST00000550335 STK32AQ8WU08 396 aa9.72□□□□□ -0.85
HCFC2-204ENST00000550335 PRDM9Q9NQV7 894 aa9.72□□□□□ -0.85
HCFC2-204ENST00000550335 EVA1BQ9NVM1 165 aa9.72□□□□□ -0.85
HCFC2-204ENST00000550335 CEP126Q9P2H0 1117 aa9.72□□□□□ -0.85
HCFC2-204ENST00000550335 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
HCFC2-204ENST00000550335 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
HCFC2-204ENST00000550335 NFATC2IPQ8NCF5 419 aa9.71□□□□□ -0.86
HCFC2-204ENST00000550335 RASA1P20936 1047 aa9.7□□□□□ -0.86
HCFC2-204ENST00000550335 PDXDC2PQ6P474 469 aa9.7□□□□□ -0.86
HCFC2-204ENST00000550335 ZBTB33Q86T24 672 aa9.7□□□□□ -0.86
HCFC2-204ENST00000550335 ARHGAP9Q9BRR9 750 aa9.7□□□□□ -0.86
HCFC2-204ENST00000550335 NCOA4Q13772 614 aa9.69□□□□□ -0.86
HCFC2-204ENST00000550335 CCDC27Q2M243 656 aa9.69□□□□□ -0.86
HCFC2-204ENST00000550335 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
HCFC2-204ENST00000550335 ZMIZ1Q9ULJ6 1067 aa9.69□□□□□ -0.86
HCFC2-204ENST00000550335 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
HCFC2-204ENST00000550335 MSS51Q4VC12 460 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 FAM200AQ8TCP9 573 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 ZNF428Q96B54 188 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L15C9J2P7 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L10C9JJH3 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L13C9JLJ4 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L11C9JVI0 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L21D6R901 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L18D6R9N7 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L22D6RA61 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L17D6RBQ6 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L19D6RCP7 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L20D6RJB6 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 TLL1O43897 1013 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 USP17L24Q0WX57 530 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 ELOAQ14241 798 aaKnown RBP9.67□□□□□ -0.86
HCFC2-204ENST00000550335 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
HCFC2-204ENST00000550335 DZIP3Q86Y13 1208 aaKnown RBP9.67□□□□□ -0.86
HCFC2-204ENST00000550335 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 ZNF592Q92610 1267 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 GPSM3Q9Y4H4 160 aa9.67□□□□□ -0.86
HCFC2-204ENST00000550335 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
HCFC2-204ENST00000550335 AGERQ15109 404 aa9.66□□□□□ -0.86
HCFC2-204ENST00000550335 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
HCFC2-204ENST00000550335 MCCD1P59942 119 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms