RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 MTERF4Q7Z6M4 381 aaKnown RBP14.91□□□□□ -0.02
VDR-208ENST00000550325 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
VDR-208ENST00000550325 ZGPATQ8N5A5 531 aaKnown RBP14.9□□□□□ -0.02
VDR-208ENST00000550325 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
VDR-208ENST00000550325 ZMYM3Q14202 1370 aa14.9□□□□□ -0.02
VDR-208ENST00000550325 ZNF500O60304 480 aaPredicted RBP14.9□□□□□ -0.02
VDR-208ENST00000550325 LMBRD1Q9NUN5 540 aa14.9□□□□□ -0.02
VDR-208ENST00000550325 NSD3Q9BZ95 1437 aa14.9□□□□□ -0.02
VDR-208ENST00000550325 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 KIAA2012Q0VF49 1180 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 BMP2KLQ5H9B9 411 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 TERF1P54274 439 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 ZNF445P59923 1031 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
VDR-208ENST00000550325 CROCC2H7BZ55 1655 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 ZBTB40Q9NUA8 1239 aa14.89□□□□□ -0.03
VDR-208ENST00000550325 AK9Q5TCS8 1911 aa14.88□□□□□ -0.03
VDR-208ENST00000550325 ADCY10Q96PN6 1610 aa14.88□□□□□ -0.03
VDR-208ENST00000550325 CCDC141Q6ZP82 1450 aa14.88□□□□□ -0.03
VDR-208ENST00000550325 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
VDR-208ENST00000550325 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
VDR-208ENST00000550325 BCL11BQ9C0K0 894 aaPredicted RBP14.88□□□□□ -0.03
VDR-208ENST00000550325 MAGI1Q96QZ7 1491 aaPredicted RBP14.88□□□□□ -0.03
VDR-208ENST00000550325 CDC45O75419 566 aa14.88□□□□□ -0.03
VDR-208ENST00000550325 GPT2Q8TD30 523 aa14.87□□□□□ -0.03
VDR-208ENST00000550325 CCDC94Q9BW85 323 aaPredicted RBP14.87□□□□□ -0.03
VDR-208ENST00000550325 POLR3AO14802 1390 aaPredicted RBP14.87□□□□□ -0.03
VDR-208ENST00000550325 TMEM63CQ9P1W3 806 aa14.87□□□□□ -0.03
VDR-208ENST00000550325 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
VDR-208ENST00000550325 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
VDR-208ENST00000550325 HS1BP3Q53T59 392 aa14.86□□□□□ -0.03
VDR-208ENST00000550325 PPP4R3BQ5MIZ7 849 aa14.86□□□□□ -0.03
VDR-208ENST00000550325 NUP160Q12769 1436 aa14.86□□□□□ -0.03
VDR-208ENST00000550325 RSPH4AQ5TD94 716 aa14.86□□□□□ -0.03
VDR-208ENST00000550325 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
VDR-208ENST00000550325 RABEP1Q15276 862 aa14.85□□□□□ -0.03
VDR-208ENST00000550325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
VDR-208ENST00000550325 ST18O60284 1047 aa14.85□□□□□ -0.03
VDR-208ENST00000550325 LRSAM1Q6UWE0 723 aa14.85□□□□□ -0.03
VDR-208ENST00000550325 GDPD2Q9HCC8 539 aa14.85□□□□□ -0.03
VDR-208ENST00000550325 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
VDR-208ENST00000550325 TMPOP42166 694 aaKnown RBP14.84□□□□□ -0.03
VDR-208ENST00000550325 TMEM132EQ6IEE7 984 aa14.84□□□□□ -0.03
VDR-208ENST00000550325 TTC12Q9H892 705 aaPredicted RBP14.83□□□□□ -0.04
VDR-208ENST00000550325 CDC42BPAQ5VT25 1732 aa14.83□□□□□ -0.04
VDR-208ENST00000550325 ADGRF5Q8IZF2 1346 aa14.83□□□□□ -0.04
VDR-208ENST00000550325 NUTM2DQ5VT03 806 aaPredicted RBP14.83□□□□□ -0.04
VDR-208ENST00000550325 TSPY26PQ9H489 355 aa14.83□□□□□ -0.04
VDR-208ENST00000550325 SYNMO15061 1565 aa14.82□□□□□ -0.04
VDR-208ENST00000550325 C16orf71Q8IYS4 520 aaPredicted RBP14.82□□□□□ -0.04
VDR-208ENST00000550325 PDLIM2Q96JY6 352 aa14.82□□□□□ -0.04
VDR-208ENST00000550325 GGNBP2Q9H3C7 697 aa14.82□□□□□ -0.04
VDR-208ENST00000550325 BBXQ8WY36 941 aaPredicted RBP14.82□□□□□ -0.04
VDR-208ENST00000550325 USP25Q9UHP3 1055 aa14.82□□□□□ -0.04
VDR-208ENST00000550325 DMTNQ08495 405 aa14.81□□□□□ -0.04
VDR-208ENST00000550325 CASC1Q6TDU7 716 aa14.81□□□□□ -0.04
VDR-208ENST00000550325 THUMPD2Q9BTF0 503 aaKnown RBP14.81□□□□□ -0.04
VDR-208ENST00000550325 GCC1Q96CN9 775 aa14.81□□□□□ -0.04
VDR-208ENST00000550325 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
VDR-208ENST00000550325 CCDC27Q2M243 656 aa14.8□□□□□ -0.04
VDR-208ENST00000550325 ATP10BO94823 1461 aa14.8□□□□□ -0.04
VDR-208ENST00000550325 MCM5P33992 734 aa14.8□□□□□ -0.04
VDR-208ENST00000550325 IBTKQ9P2D0 1353 aaPredicted RBP14.8□□□□□ -0.04
VDR-208ENST00000550325 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
VDR-208ENST00000550325 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
VDR-208ENST00000550325 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
VDR-208ENST00000550325 NEK4P51957 841 aa14.79□□□□□ -0.04
VDR-208ENST00000550325 ZNF771Q7L3S4 317 aaPredicted RBP14.79□□□□□ -0.04
VDR-208ENST00000550325 KIF3AQ9Y496 699 aa14.79□□□□□ -0.04
VDR-208ENST00000550325 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
VDR-208ENST00000550325 MYRIPQ8NFW9 859 aa14.78□□□□□ -0.04
VDR-208ENST00000550325 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
VDR-208ENST00000550325 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
VDR-208ENST00000550325 SMARCA5O60264 1052 aaPredicted RBP14.78□□□□□ -0.04
VDR-208ENST00000550325 SLC24A1O60721 1099 aa14.78□□□□□ -0.04
VDR-208ENST00000550325 FGD1P98174 961 aa14.78□□□□□ -0.04
VDR-208ENST00000550325 NOLC1Q14978 699 aaKnown RBP eCLIP14.78□□□□□ -0.04
VDR-208ENST00000550325 PLXNC1O60486 1568 aa14.78□□□□□ -0.04
VDR-208ENST00000550325 ARHGAP5Q13017 1502 aa14.78□□□□□ -0.04
VDR-208ENST00000550325 CT47B1P0C2W7 299 aaPredicted RBP14.78□□□□□ -0.04
VDR-208ENST00000550325 GSPT1P15170 499 aaKnown RBP14.78□□□□□ -0.04
VDR-208ENST00000550325 ATAD2Q6PL18 1390 aa14.77□□□□□ -0.04
VDR-208ENST00000550325 CHAF1AQ13111 956 aaPredicted RBP14.77□□□□□ -0.04
VDR-208ENST00000550325 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.04
VDR-208ENST00000550325 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.04
VDR-208ENST00000550325 TRIM35Q9UPQ4 493 aa14.77□□□□□ -0.04
VDR-208ENST00000550325 ATP2B3Q16720 1220 aa14.77□□□□□ -0.04
VDR-208ENST00000550325 OTUD7AQ8TE49 926 aaPredicted RBP14.77□□□□□ -0.04
VDR-208ENST00000550325 SYAP1Q96A49 352 aaPredicted RBP14.77□□□□□ -0.04
VDR-208ENST00000550325 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.05
VDR-208ENST00000550325 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.05
VDR-208ENST00000550325 SPC24Q8NBT2 197 aa14.76□□□□□ -0.05
VDR-208ENST00000550325 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
VDR-208ENST00000550325 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
VDR-208ENST00000550325 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
VDR-208ENST00000550325 MBD3O95983 291 aa14.76□□□□□ -0.05
VDR-208ENST00000550325 KIF3BO15066 747 aa14.75□□□□□ -0.05
VDR-208ENST00000550325 HMGN5P82970 282 aaKnown RBP14.75□□□□□ -0.05
VDR-208ENST00000550325 USP26Q9BXU7 913 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms