RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 BTG4Q9NY30 223 aa15.57■□□□□ 0.08
VTI1BP3-201ENST00000550220 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
VTI1BP3-201ENST00000550220 MARF1Q9Y4F3 1742 aaKnown RBP15.57■□□□□ 0.08
VTI1BP3-201ENST00000550220 ARHGEF28Q8N1W1 1705 aaKnown RBP15.56■□□□□ 0.08
VTI1BP3-201ENST00000550220 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.55■□□□□ 0.08
VTI1BP3-201ENST00000550220 EVC2Q86UK5 1308 aa15.55■□□□□ 0.08
VTI1BP3-201ENST00000550220 ABTB2Q8N961 1025 aa15.55■□□□□ 0.08
VTI1BP3-201ENST00000550220 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
VTI1BP3-201ENST00000550220 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
VTI1BP3-201ENST00000550220 ROCK2O75116 1388 aaKnown RBP15.53■□□□□ 0.08
VTI1BP3-201ENST00000550220 KRT27Q7Z3Y8 459 aa15.53■□□□□ 0.08
VTI1BP3-201ENST00000550220 SF3B2Q13435 895 aaKnown RBP15.52■□□□□ 0.08
VTI1BP3-201ENST00000550220 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 A0A0G2JS52 829 aa15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 MYT1Q01538 1121 aa15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 ITSN1Q15811 1721 aa15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 NWD2Q9ULI1 1742 aa15.51■□□□□ 0.07
VTI1BP3-201ENST00000550220 GLI3P10071 1580 aa15.5■□□□□ 0.07
VTI1BP3-201ENST00000550220 SPATA31A5Q5VU36 1347 aa15.5■□□□□ 0.07
VTI1BP3-201ENST00000550220 SPATA31A7Q8IWB4 1347 aa15.5■□□□□ 0.07
VTI1BP3-201ENST00000550220 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
VTI1BP3-201ENST00000550220 ALS2Q96Q42 1657 aa15.5■□□□□ 0.07
VTI1BP3-201ENST00000550220 BLMP54132 1417 aaPredicted RBP15.5■□□□□ 0.07
VTI1BP3-201ENST00000550220 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
VTI1BP3-201ENST00000550220 EVA1CP58658 441 aa15.49■□□□□ 0.07
VTI1BP3-201ENST00000550220 ZC3H6P61129 1189 aaKnown RBP15.49■□□□□ 0.07
VTI1BP3-201ENST00000550220 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
VTI1BP3-201ENST00000550220 FAM98CQ17RN3 349 aaKnown RBP15.49■□□□□ 0.07
VTI1BP3-201ENST00000550220 NUTM2GQ5VZR2 741 aa15.49■□□□□ 0.07
VTI1BP3-201ENST00000550220 COL14A1Q05707 1796 aaKnown RBP15.47■□□□□ 0.07
VTI1BP3-201ENST00000550220 GCP02774 474 aa15.47■□□□□ 0.07
VTI1BP3-201ENST00000550220 CPDO75976 1380 aa15.47■□□□□ 0.07
VTI1BP3-201ENST00000550220 TONSLQ96HA7 1378 aa15.47■□□□□ 0.07
VTI1BP3-201ENST00000550220 USP19O94966 1318 aa15.46■□□□□ 0.07
VTI1BP3-201ENST00000550220 SLC24A1O60721 1099 aa15.46■□□□□ 0.07
VTI1BP3-201ENST00000550220 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
VTI1BP3-201ENST00000550220 CARD11Q9BXL7 1154 aa15.46■□□□□ 0.07
VTI1BP3-201ENST00000550220 SPATA31A1Q5TZJ5 1347 aa15.45■□□□□ 0.06
VTI1BP3-201ENST00000550220 NLRP6P59044 892 aa15.45■□□□□ 0.06
VTI1BP3-201ENST00000550220 STRN4Q9NRL3 753 aa15.45■□□□□ 0.06
VTI1BP3-201ENST00000550220 ABCA3Q99758 1704 aa15.45■□□□□ 0.06
VTI1BP3-201ENST00000550220 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
VTI1BP3-201ENST00000550220 BARGINQ6ZT62 677 aa15.44■□□□□ 0.06
VTI1BP3-201ENST00000550220 USP6P35125 1406 aa15.43■□□□□ 0.06
VTI1BP3-201ENST00000550220 THRAP3Q9Y2W1 955 aaKnown RBP15.43■□□□□ 0.06
VTI1BP3-201ENST00000550220 SBNO2Q9Y2G9 1366 aa15.43■□□□□ 0.06
VTI1BP3-201ENST00000550220 TOPAZ1Q8N9V7 1692 aa15.43■□□□□ 0.06
VTI1BP3-201ENST00000550220 BAG6P46379 1132 aa15.42■□□□□ 0.06
VTI1BP3-201ENST00000550220 KCNH5Q8NCM2 988 aa15.42■□□□□ 0.06
VTI1BP3-201ENST00000550220 TTC21AQ8NDW8 1320 aa15.42■□□□□ 0.06
VTI1BP3-201ENST00000550220 FAM196AQ6ZSG2 479 aa15.41■□□□□ 0.06
VTI1BP3-201ENST00000550220 TCP11L2Q8N4U5 519 aa15.41■□□□□ 0.06
VTI1BP3-201ENST00000550220 PUS7Q96PZ0 661 aaKnown RBP15.41■□□□□ 0.06
VTI1BP3-201ENST00000550220 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
VTI1BP3-201ENST00000550220 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
VTI1BP3-201ENST00000550220 SSH2Q76I76 1423 aa15.4■□□□□ 0.06
VTI1BP3-201ENST00000550220 TTC21BQ7Z4L5 1316 aa15.4■□□□□ 0.06
VTI1BP3-201ENST00000550220 QRICH2Q9H0J4 1663 aa15.39■□□□□ 0.05
VTI1BP3-201ENST00000550220 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
VTI1BP3-201ENST00000550220 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
VTI1BP3-201ENST00000550220 NRAPQ86VF7 1730 aa15.39■□□□□ 0.05
VTI1BP3-201ENST00000550220 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
VTI1BP3-201ENST00000550220 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
VTI1BP3-201ENST00000550220 DEFB132Q7Z7B7 95 aa15.38■□□□□ 0.05
VTI1BP3-201ENST00000550220 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
VTI1BP3-201ENST00000550220 EP400Q96L91 3159 aa15.37■□□□□ 0.05
VTI1BP3-201ENST00000550220 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
VTI1BP3-201ENST00000550220 CPSF1Q10570 1443 aaKnown RBP15.36■□□□□ 0.05
VTI1BP3-201ENST00000550220 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
VTI1BP3-201ENST00000550220 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
VTI1BP3-201ENST00000550220 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
VTI1BP3-201ENST00000550220 CDCA7Q9BWT1 371 aaPredicted RBP15.35■□□□□ 0.05
VTI1BP3-201ENST00000550220 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
VTI1BP3-201ENST00000550220 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
VTI1BP3-201ENST00000550220 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
VTI1BP3-201ENST00000550220 NRKQ7Z2Y5 1582 aa15.34■□□□□ 0.05
VTI1BP3-201ENST00000550220 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
VTI1BP3-201ENST00000550220 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.04
VTI1BP3-201ENST00000550220 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.04
VTI1BP3-201ENST00000550220 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.04
VTI1BP3-201ENST00000550220 CRB1P82279 1406 aa15.33■□□□□ 0.04
VTI1BP3-201ENST00000550220 SLIT3O75094 1523 aa15.33■□□□□ 0.04
VTI1BP3-201ENST00000550220 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
VTI1BP3-201ENST00000550220 COL5A2P05997 1499 aaPredicted RBP15.32■□□□□ 0.04
VTI1BP3-201ENST00000550220 THSD7AQ9UPZ6 1657 aa15.32■□□□□ 0.04
VTI1BP3-201ENST00000550220 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
VTI1BP3-201ENST00000550220 WDR17Q8IZU2 1322 aa15.31■□□□□ 0.04
VTI1BP3-201ENST00000550220 USP31Q70CQ4 1352 aa15.31■□□□□ 0.04
VTI1BP3-201ENST00000550220 NINLQ9Y2I6 1382 aa15.31■□□□□ 0.04
VTI1BP3-201ENST00000550220 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
VTI1BP3-201ENST00000550220 DISP2A7MBM2 1401 aa15.3■□□□□ 0.04
VTI1BP3-201ENST00000550220 TRIM37O94972 964 aa15.3■□□□□ 0.04
VTI1BP3-201ENST00000550220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.3■□□□□ 0.04
VTI1BP3-201ENST00000550220 SLC12A5Q9H2X9 1139 aa15.3■□□□□ 0.04
VTI1BP3-201ENST00000550220 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
VTI1BP3-201ENST00000550220 PARD3Q8TEW0 1356 aa15.29■□□□□ 0.04
VTI1BP3-201ENST00000550220 APBA3O96018 575 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms