RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MYT1Q01538 1121 aa19.37■□□□□ 0.69
NUP188-211ENST00000550219 NUDT16Q96DE0 195 aaKnown RBP19.37■□□□□ 0.69
NUP188-211ENST00000550219 FAM83GA6ND36 823 aa19.36■□□□□ 0.69
NUP188-211ENST00000550219 SEPT12Q8IYM1 358 aa19.36■□□□□ 0.69
NUP188-211ENST00000550219 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
NUP188-211ENST00000550219 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
NUP188-211ENST00000550219 PHRF1Q9P1Y6 1649 aaKnown RBP19.34■□□□□ 0.69
NUP188-211ENST00000550219 BTG4Q9NY30 223 aa19.34■□□□□ 0.69
NUP188-211ENST00000550219 QRICH2Q9H0J4 1663 aa19.32■□□□□ 0.68
NUP188-211ENST00000550219 BLMP54132 1417 aaPredicted RBP19.32■□□□□ 0.68
NUP188-211ENST00000550219 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
NUP188-211ENST00000550219 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
NUP188-211ENST00000550219 FAM98CQ17RN3 349 aaKnown RBP19.3■□□□□ 0.68
NUP188-211ENST00000550219 CCDC125Q86Z20 511 aa19.3■□□□□ 0.68
NUP188-211ENST00000550219 ACEP12821 1306 aa19.29■□□□□ 0.68
NUP188-211ENST00000550219 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
NUP188-211ENST00000550219 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
NUP188-211ENST00000550219 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
NUP188-211ENST00000550219 KIAA0232Q92628 1395 aa19.29■□□□□ 0.68
NUP188-211ENST00000550219 EP400Q96L91 3159 aa19.28■□□□□ 0.68
NUP188-211ENST00000550219 KRT27Q7Z3Y8 459 aa19.28■□□□□ 0.68
NUP188-211ENST00000550219 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
NUP188-211ENST00000550219 SF3B2Q13435 895 aaKnown RBP19.27■□□□□ 0.68
NUP188-211ENST00000550219 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
NUP188-211ENST00000550219 ZRANB1Q9UGI0 708 aa19.27■□□□□ 0.68
NUP188-211ENST00000550219 CCDC61Q9Y6R9 512 aa19.27■□□□□ 0.68
NUP188-211ENST00000550219 NRKQ7Z2Y5 1582 aa19.27■□□□□ 0.67
NUP188-211ENST00000550219 TRPM1Q7Z4N2 1603 aa19.26■□□□□ 0.67
NUP188-211ENST00000550219 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
NUP188-211ENST00000550219 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
NUP188-211ENST00000550219 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
NUP188-211ENST00000550219 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
NUP188-211ENST00000550219 DEFB132Q7Z7B7 95 aa19.25■□□□□ 0.67
NUP188-211ENST00000550219 CABP2Q9NPB3 220 aa19.25■□□□□ 0.67
NUP188-211ENST00000550219 ONECUT3O60422 494 aaPredicted RBP19.24■□□□□ 0.67
NUP188-211ENST00000550219 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
NUP188-211ENST00000550219 STRN4Q9NRL3 753 aa19.24■□□□□ 0.67
NUP188-211ENST00000550219 SPATA31A5Q5VU36 1347 aa19.24■□□□□ 0.67
NUP188-211ENST00000550219 SPATA31A7Q8IWB4 1347 aa19.24■□□□□ 0.67
NUP188-211ENST00000550219 THSD7AQ9UPZ6 1657 aa19.23■□□□□ 0.67
NUP188-211ENST00000550219 PLEKHG3A1L390 1219 aa19.22■□□□□ 0.67
NUP188-211ENST00000550219 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
NUP188-211ENST00000550219 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
NUP188-211ENST00000550219 ROCK2O75116 1388 aaKnown RBP19.2■□□□□ 0.66
NUP188-211ENST00000550219 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
NUP188-211ENST00000550219 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
NUP188-211ENST00000550219 USP19O94966 1318 aa19.18■□□□□ 0.66
NUP188-211ENST00000550219 SPATA31A1Q5TZJ5 1347 aa19.18■□□□□ 0.66
NUP188-211ENST00000550219 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
NUP188-211ENST00000550219 RGPD1P0DJD0 1748 aa19.17■□□□□ 0.66
NUP188-211ENST00000550219 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
NUP188-211ENST00000550219 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
NUP188-211ENST00000550219 USP6P35125 1406 aa19.17■□□□□ 0.66
NUP188-211ENST00000550219 BAG6P46379 1132 aa19.16■□□□□ 0.66
NUP188-211ENST00000550219 EVA1CP58658 441 aa19.16■□□□□ 0.66
NUP188-211ENST00000550219 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
NUP188-211ENST00000550219 CABP1Q9NZU7 370 aa19.16■□□□□ 0.66
NUP188-211ENST00000550219 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
NUP188-211ENST00000550219 NLRP13Q86W25 1043 aa19.15■□□□□ 0.66
NUP188-211ENST00000550219 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
NUP188-211ENST00000550219 CPDO75976 1380 aa19.14■□□□□ 0.65
NUP188-211ENST00000550219 TNS1Q9HBL0 1735 aaKnown RBP19.14■□□□□ 0.65
NUP188-211ENST00000550219 PIK3C2AO00443 1686 aa19.13■□□□□ 0.65
NUP188-211ENST00000550219 GCP02774 474 aa19.12■□□□□ 0.65
NUP188-211ENST00000550219 LARP1Q6PKG0 1096 aaKnown RBP19.12■□□□□ 0.65
NUP188-211ENST00000550219 SLIT3O75094 1523 aa19.11■□□□□ 0.65
NUP188-211ENST00000550219 BRD4O60885 1362 aaPredicted RBP19.11■□□□□ 0.65
NUP188-211ENST00000550219 NLRP6P59044 892 aa19.11■□□□□ 0.65
NUP188-211ENST00000550219 COL5A2P05997 1499 aaPredicted RBP19.1■□□□□ 0.65
NUP188-211ENST00000550219 EN1Q05925 392 aaPredicted RBP19.1■□□□□ 0.65
NUP188-211ENST00000550219 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
NUP188-211ENST00000550219 AKAP12Q02952 1782 aa19.09■□□□□ 0.65
NUP188-211ENST00000550219 TCP11L2Q8N4U5 519 aa19.07■□□□□ 0.64
NUP188-211ENST00000550219 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
NUP188-211ENST00000550219 SOX12O15370 315 aa19.06■□□□□ 0.64
NUP188-211ENST00000550219 TRIM37O94972 964 aa19.06■□□□□ 0.64
NUP188-211ENST00000550219 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
NUP188-211ENST00000550219 BARGINQ6ZT62 677 aa19.06■□□□□ 0.64
NUP188-211ENST00000550219 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
NUP188-211ENST00000550219 DISP2A7MBM2 1401 aa19.05■□□□□ 0.64
NUP188-211ENST00000550219 CRB1P82279 1406 aa19.05■□□□□ 0.64
NUP188-211ENST00000550219 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
NUP188-211ENST00000550219 TTC21BQ7Z4L5 1316 aa19.03■□□□□ 0.64
NUP188-211ENST00000550219 PARP4Q9UKK3 1724 aaKnown RBP19.03■□□□□ 0.64
NUP188-211ENST00000550219 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
NUP188-211ENST00000550219 EZH2Q15910 746 aaKnown RBP19.03■□□□□ 0.64
NUP188-211ENST00000550219 AATKQ6ZMQ8 1374 aa19.03■□□□□ 0.64
NUP188-211ENST00000550219 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
NUP188-211ENST00000550219 LRP5O75197 1615 aa19.03■□□□□ 0.64
NUP188-211ENST00000550219 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
NUP188-211ENST00000550219 LRRC37A3O60309 1634 aa19.02■□□□□ 0.64
NUP188-211ENST00000550219 TOM1L2Q6ZVM7 507 aa19.01■□□□□ 0.63
NUP188-211ENST00000550219 THRAP3Q9Y2W1 955 aaKnown RBP19.01■□□□□ 0.63
NUP188-211ENST00000550219 APBA3O96018 575 aa19■□□□□ 0.63
NUP188-211ENST00000550219 ZNF692Q9BU19 519 aaPredicted RBP19■□□□□ 0.63
NUP188-211ENST00000550219 SBNO2Q9Y2G9 1366 aa19■□□□□ 0.63
NUP188-211ENST00000550219 COL18A1P39060 1754 aa19■□□□□ 0.63
NUP188-211ENST00000550219 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
NUP188-211ENST00000550219 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
NUP188-211ENST00000550219 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms