RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 COL14A1Q05707 1796 aaKnown RBP28.71■■■□□ 2.19
SLC38A1-208ENST00000550173 CCDC61Q9Y6R9 512 aa28.71■■■□□ 2.19
SLC38A1-208ENST00000550173 ONECUT3O60422 494 aaPredicted RBP28.7■■■□□ 2.18
SLC38A1-208ENST00000550173 NRAPQ86VF7 1730 aa28.69■■■□□ 2.18
SLC38A1-208ENST00000550173 CRYBG1Q9Y4K1 1723 aa28.69■■■□□ 2.18
SLC38A1-208ENST00000550173 ACEP12821 1306 aa28.69■■■□□ 2.18
SLC38A1-208ENST00000550173 TOPAZ1Q8N9V7 1692 aa28.68■■■□□ 2.18
SLC38A1-208ENST00000550173 L3MBTL2Q969R5 705 aa28.68■■■□□ 2.18
SLC38A1-208ENST00000550173 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
SLC38A1-208ENST00000550173 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
SLC38A1-208ENST00000550173 A0A0G2JS52 829 aa28.67■■■□□ 2.18
SLC38A1-208ENST00000550173 MYT1Q01538 1121 aa28.67■■■□□ 2.18
SLC38A1-208ENST00000550173 NBPF8Q3BBV2 869 aa28.67■■■□□ 2.18
SLC38A1-208ENST00000550173 PRDM11Q9NQV5 511 aa28.67■■■□□ 2.18
SLC38A1-208ENST00000550173 EP400Q96L91 3159 aa28.66■■■□□ 2.18
SLC38A1-208ENST00000550173 PLEKHG3A1L390 1219 aa28.66■■■□□ 2.18
SLC38A1-208ENST00000550173 SRPK2P78362 688 aaKnown RBP28.65■■■□□ 2.18
SLC38A1-208ENST00000550173 NUTM2GQ5VZR2 741 aa28.65■■■□□ 2.18
SLC38A1-208ENST00000550173 KRT27Q7Z3Y8 459 aa28.65■■■□□ 2.18
SLC38A1-208ENST00000550173 SIN3AQ96ST3 1273 aa28.65■■■□□ 2.18
SLC38A1-208ENST00000550173 BLMP54132 1417 aaPredicted RBP28.65■■■□□ 2.18
SLC38A1-208ENST00000550173 FAM98CQ17RN3 349 aaKnown RBP28.64■■■□□ 2.18
SLC38A1-208ENST00000550173 ZRANB1Q9UGI0 708 aa28.63■■■□□ 2.17
SLC38A1-208ENST00000550173 SF3B2Q13435 895 aaKnown RBP28.61■■■□□ 2.17
SLC38A1-208ENST00000550173 NEUROD1Q13562 356 aa28.61■■■□□ 2.17
SLC38A1-208ENST00000550173 KIAA0232Q92628 1395 aa28.61■■■□□ 2.17
SLC38A1-208ENST00000550173 ZC3H6P61129 1189 aaKnown RBP28.6■■■□□ 2.17
SLC38A1-208ENST00000550173 CABP2Q9NPB3 220 aa28.6■■■□□ 2.17
SLC38A1-208ENST00000550173 PHRF1Q9P1Y6 1649 aaKnown RBP28.6■■■□□ 2.17
SLC38A1-208ENST00000550173 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
SLC38A1-208ENST00000550173 CHRNA2Q15822 529 aa28.59■■■□□ 2.17
SLC38A1-208ENST00000550173 SPATA31A5Q5VU36 1347 aa28.59■■■□□ 2.17
SLC38A1-208ENST00000550173 SPATA31A7Q8IWB4 1347 aa28.59■■■□□ 2.17
SLC38A1-208ENST00000550173 PPIP5K1Q6PFW1 1433 aa28.59■■■□□ 2.17
SLC38A1-208ENST00000550173 ABTB2Q8N961 1025 aa28.58■■■□□ 2.17
SLC38A1-208ENST00000550173 DEFB132Q7Z7B7 95 aa28.56■■■□□ 2.16
SLC38A1-208ENST00000550173 STRN4Q9NRL3 753 aa28.54■■■□□ 2.16
SLC38A1-208ENST00000550173 TRPM1Q7Z4N2 1603 aa28.54■■■□□ 2.16
SLC38A1-208ENST00000550173 NLRP13Q86W25 1043 aa28.51■■■□□ 2.15
SLC38A1-208ENST00000550173 CABP1Q9NZU7 370 aa28.51■■■□□ 2.15
SLC38A1-208ENST00000550173 ROCK2O75116 1388 aaKnown RBP28.5■■■□□ 2.15
SLC38A1-208ENST00000550173 USP19O94966 1318 aa28.49■■■□□ 2.15
SLC38A1-208ENST00000550173 SPATA31A1Q5TZJ5 1347 aa28.49■■■□□ 2.15
SLC38A1-208ENST00000550173 EVC2Q86UK5 1308 aa28.49■■■□□ 2.15
SLC38A1-208ENST00000550173 EVA1CP58658 441 aa28.49■■■□□ 2.15
SLC38A1-208ENST00000550173 NRKQ7Z2Y5 1582 aa28.49■■■□□ 2.15
SLC38A1-208ENST00000550173 BRD4O60885 1362 aaPredicted RBP28.48■■■□□ 2.15
SLC38A1-208ENST00000550173 FAM182BQ5T319 152 aa28.47■■■□□ 2.15
SLC38A1-208ENST00000550173 THSD7AQ9UPZ6 1657 aa28.47■■■□□ 2.15
SLC38A1-208ENST00000550173 GCP02774 474 aa28.45■■■□□ 2.14
SLC38A1-208ENST00000550173 BAG6P46379 1132 aa28.45■■■□□ 2.14
SLC38A1-208ENST00000550173 CPDO75976 1380 aa28.45■■■□□ 2.14
SLC38A1-208ENST00000550173 USP6P35125 1406 aa28.44■■■□□ 2.14
SLC38A1-208ENST00000550173 USP35Q9P2H5 1018 aa28.44■■■□□ 2.14
SLC38A1-208ENST00000550173 SSH2Q76I76 1423 aa28.43■■■□□ 2.14
SLC38A1-208ENST00000550173 CAMTA1Q9Y6Y1 1673 aa28.42■■■□□ 2.14
SLC38A1-208ENST00000550173 NLRP6P59044 892 aa28.42■■■□□ 2.14
SLC38A1-208ENST00000550173 LARP1Q6PKG0 1096 aaKnown RBP28.4■■■□□ 2.14
SLC38A1-208ENST00000550173 LMO7Q8WWI1 1683 aa28.39■■■□□ 2.14
SLC38A1-208ENST00000550173 ZBTB7CA1YPR0 619 aa28.39■■■□□ 2.14
SLC38A1-208ENST00000550173 RGPD1P0DJD0 1748 aa28.38■■■□□ 2.13
SLC38A1-208ENST00000550173 BARGINQ6ZT62 677 aa28.37■■■□□ 2.13
SLC38A1-208ENST00000550173 TCP11L2Q8N4U5 519 aa28.35■■■□□ 2.13
SLC38A1-208ENST00000550173 ZNF692Q9BU19 519 aaPredicted RBP28.35■■■□□ 2.13
SLC38A1-208ENST00000550173 EN1Q05925 392 aaPredicted RBP28.34■■■□□ 2.13
SLC38A1-208ENST00000550173 FAM196AQ6ZSG2 479 aa28.34■■■□□ 2.13
SLC38A1-208ENST00000550173 PDE3BQ13370 1112 aa28.33■■■□□ 2.13
SLC38A1-208ENST00000550173 SLIT3O75094 1523 aa28.33■■■□□ 2.13
SLC38A1-208ENST00000550173 PIK3C2AO00443 1686 aa28.32■■■□□ 2.12
SLC38A1-208ENST00000550173 CARD11Q9BXL7 1154 aa28.32■■■□□ 2.12
SLC38A1-208ENST00000550173 COL5A2P05997 1499 aaPredicted RBP28.32■■■□□ 2.12
SLC38A1-208ENST00000550173 THRAP3Q9Y2W1 955 aaKnown RBP28.31■■■□□ 2.12
SLC38A1-208ENST00000550173 TTC21BQ7Z4L5 1316 aa28.31■■■□□ 2.12
SLC38A1-208ENST00000550173 TRIM37O94972 964 aa28.3■■■□□ 2.12
SLC38A1-208ENST00000550173 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
SLC38A1-208ENST00000550173 AATKQ6ZMQ8 1374 aa28.29■■■□□ 2.12
SLC38A1-208ENST00000550173 TONSLQ96HA7 1378 aa28.29■■■□□ 2.12
SLC38A1-208ENST00000550173 TNS1Q9HBL0 1735 aaKnown RBP28.29■■■□□ 2.12
SLC38A1-208ENST00000550173 DISP2A7MBM2 1401 aa28.27■■■□□ 2.12
SLC38A1-208ENST00000550173 CRB1P82279 1406 aa28.27■■■□□ 2.12
SLC38A1-208ENST00000550173 TTC21AQ8NDW8 1320 aa28.27■■■□□ 2.12
SLC38A1-208ENST00000550173 PSDA5PKW4 1024 aaPredicted RBP28.27■■■□□ 2.12
SLC38A1-208ENST00000550173 SRCAPQ6ZRS2 3230 aa28.27■■■□□ 2.12
SLC38A1-208ENST00000550173 KTN1Q86UP2 1357 aaKnown RBP28.26■■■□□ 2.12
SLC38A1-208ENST00000550173 SBNO2Q9Y2G9 1366 aa28.26■■■□□ 2.12
SLC38A1-208ENST00000550173 CPSF1Q10570 1443 aaKnown RBP28.26■■■□□ 2.11
SLC38A1-208ENST00000550173 SOX12O15370 315 aa28.24■■■□□ 2.11
SLC38A1-208ENST00000550173 EZH2Q15910 746 aaKnown RBP28.24■■■□□ 2.11
SLC38A1-208ENST00000550173 KCNH5Q8NCM2 988 aa28.24■■■□□ 2.11
SLC38A1-208ENST00000550173 APBA3O96018 575 aa28.23■■■□□ 2.11
SLC38A1-208ENST00000550173 COL18A1P39060 1754 aa28.22■■■□□ 2.11
SLC38A1-208ENST00000550173 TOM1L2Q6ZVM7 507 aa28.22■■■□□ 2.11
SLC38A1-208ENST00000550173 ARHGEF25Q86VW2 580 aa28.21■■■□□ 2.11
SLC38A1-208ENST00000550173 CAMKK2Q96RR4 588 aa28.21■■■□□ 2.11
SLC38A1-208ENST00000550173 AXIN2Q9Y2T1 843 aa28.21■■■□□ 2.11
SLC38A1-208ENST00000550173 PARP4Q9UKK3 1724 aaKnown RBP28.21■■■□□ 2.11
SLC38A1-208ENST00000550173 TMC1Q8TDI8 760 aa28.19■■■□□ 2.1
SLC38A1-208ENST00000550173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.18■■■□□ 2.11e-6■■■■□ 22.6
SLC38A1-208ENST00000550173 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
SLC38A1-208ENST00000550173 WDR17Q8IZU2 1322 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms