RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 ACEP12821 1306 aa9.08□□□□□ -0.96
TMEM106C-213ENST00000550146 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
TMEM106C-213ENST00000550146 CABLES1Q8TDN4 633 aa9.08□□□□□ -0.96
TMEM106C-213ENST00000550146 PPIP5K1Q6PFW1 1433 aa9.07□□□□□ -0.96
TMEM106C-213ENST00000550146 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
TMEM106C-213ENST00000550146 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
TMEM106C-213ENST00000550146 CRYBG1Q9Y4K1 1723 aa9.07□□□□□ -0.96
TMEM106C-213ENST00000550146 POLR3AO14802 1390 aaPredicted RBP9.07□□□□□ -0.96
TMEM106C-213ENST00000550146 RBM6P78332 1123 aaKnown RBP9.06□□□□□ -0.96
TMEM106C-213ENST00000550146 TRPC5Q9UL62 973 aaPredicted RBP9.06□□□□□ -0.96
TMEM106C-213ENST00000550146 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
TMEM106C-213ENST00000550146 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
TMEM106C-213ENST00000550146 ABTB2Q8N961 1025 aa9.05□□□□□ -0.96
TMEM106C-213ENST00000550146 SBNO2Q9Y2G9 1366 aa9.04□□□□□ -0.96
TMEM106C-213ENST00000550146 UNC5CLQ8IV45 518 aa9.04□□□□□ -0.96
TMEM106C-213ENST00000550146 CDK12Q9NYV4 1490 aaPredicted RBP9.03□□□□□ -0.96
TMEM106C-213ENST00000550146 BRD4O60885 1362 aaPredicted RBP9.03□□□□□ -0.96
TMEM106C-213ENST00000550146 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
TMEM106C-213ENST00000550146 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
TMEM106C-213ENST00000550146 NLRP13Q86W25 1043 aa9.03□□□□□ -0.96
TMEM106C-213ENST00000550146 ZNF692Q9BU19 519 aaPredicted RBP9.03□□□□□ -0.96
TMEM106C-213ENST00000550146 NWD2Q9ULI1 1742 aa9.02□□□□□ -0.96
TMEM106C-213ENST00000550146 BCL9LQ86UU0 1499 aa9.02□□□□□ -0.96
TMEM106C-213ENST00000550146 AKAP12Q02952 1782 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 SLIT2O94813 1529 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 TMC1Q8TDI8 760 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 ATRNO75882 1429 aa9.02□□□□□ -0.97
TMEM106C-213ENST00000550146 USP6P35125 1406 aa9.01□□□□□ -0.97
TMEM106C-213ENST00000550146 NLRP6P59044 892 aa9.01□□□□□ -0.97
TMEM106C-213ENST00000550146 CACNB1Q02641 598 aaPredicted RBP9.01□□□□□ -0.97
TMEM106C-213ENST00000550146 BTG4Q9NY30 223 aa9.01□□□□□ -0.97
TMEM106C-213ENST00000550146 PHRF1Q9P1Y6 1649 aaKnown RBP9.01□□□□□ -0.97
TMEM106C-213ENST00000550146 KTN1Q86UP2 1357 aaKnown RBP9□□□□□ -0.97
TMEM106C-213ENST00000550146 NRAPQ86VF7 1730 aa9□□□□□ -0.97
TMEM106C-213ENST00000550146 ZC3H6P61129 1189 aaKnown RBP9□□□□□ -0.97
TMEM106C-213ENST00000550146 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
TMEM106C-213ENST00000550146 VPS72Q15906 364 aa9□□□□□ -0.97
TMEM106C-213ENST00000550146 HDGFL2Q7Z4V5 671 aaPredicted RBP9□□□□□ -0.97
TMEM106C-213ENST00000550146 PUS7Q96PZ0 661 aaKnown RBP9□□□□□ -0.97
TMEM106C-213ENST00000550146 USP47Q96K76 1375 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 RGS12O14924 1447 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 TMF1P82094 1093 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 TESK2Q96S53 571 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 TERF2IPQ9NYB0 399 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 TTC21AQ8NDW8 1320 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 COL14A1Q05707 1796 aaKnown RBP8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
TMEM106C-213ENST00000550146 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
TMEM106C-213ENST00000550146 GCP02774 474 aa8.98□□□□□ -0.97
TMEM106C-213ENST00000550146 EVA1CP58658 441 aa8.98□□□□□ -0.97
TMEM106C-213ENST00000550146 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
TMEM106C-213ENST00000550146 USP19O94966 1318 aa8.98□□□□□ -0.97
TMEM106C-213ENST00000550146 GLI3P10071 1580 aa8.98□□□□□ -0.97
TMEM106C-213ENST00000550146 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 SSH2Q76I76 1423 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 MON2Q7Z3U7 1717 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 BRWD3Q6RI45 1802 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 A0A0G2JS52 829 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 MYT1Q01538 1121 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 CHRNA2Q15822 529 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 SLC12A5Q9H2X9 1139 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 NRKQ7Z2Y5 1582 aa8.97□□□□□ -0.97
TMEM106C-213ENST00000550146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 KCNH5Q8NCM2 988 aa8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 STRN4Q9NRL3 753 aa8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 PIK3C2AO00443 1686 aa8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 CPDO75976 1380 aa8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 NINLQ9Y2I6 1382 aa8.96□□□□□ -0.98
TMEM106C-213ENST00000550146 USP54Q70EL1 1684 aa8.95□□□□□ -0.98
TMEM106C-213ENST00000550146 SOX12O15370 315 aa8.95□□□□□ -0.98
TMEM106C-213ENST00000550146 LMO7Q8WWI1 1683 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 ONECUT3O60422 494 aaPredicted RBP8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 EIF4G2P78344 907 aaKnown RBP eCLIP8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 FAM98CQ17RN3 349 aaKnown RBP8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 SEPT12Q8IYM1 358 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 SPATA31A5Q5VU36 1347 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 SPATA31A7Q8IWB4 1347 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 A0A1W2PP64 1363 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 EDC4Q6P2E9 1401 aaKnown RBP8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 CD163L1Q9NR16 1453 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 SLIT3O75094 1523 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 COL18A1P39060 1754 aa8.94□□□□□ -0.98
TMEM106C-213ENST00000550146 NME9Q86XW9 330 aa8.93□□□□□ -0.98
TMEM106C-213ENST00000550146 AATKQ6ZMQ8 1374 aa8.93□□□□□ -0.98
TMEM106C-213ENST00000550146 RGPD5Q99666 1765 aa8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 USP31Q70CQ4 1352 aa8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 SPATA31A1Q5TZJ5 1347 aa8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 LARP1Q6PKG0 1096 aaKnown RBP8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 KRT27Q7Z3Y8 459 aa8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
TMEM106C-213ENST00000550146 CAMTA1Q9Y6Y1 1673 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms