RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MARF1Q9Y4F3 1742 aaKnown RBP27.04■■□□□ 1.92
DDX54-207ENST00000550016 SLC12A5Q9H2X9 1139 aa27.04■■□□□ 1.92
DDX54-207ENST00000550016 CPSF1Q10570 1443 aaKnown RBP27.04■■□□□ 1.92
DDX54-207ENST00000550016 MON2Q7Z3U7 1717 aa27.03■■□□□ 1.92
DDX54-207ENST00000550016 NINLQ9Y2I6 1382 aa27.02■■□□□ 1.92
DDX54-207ENST00000550016 PHF23Q9BUL5 403 aaPredicted RBP27.02■■□□□ 1.92
DDX54-207ENST00000550016 ABCA3Q99758 1704 aa27.02■■□□□ 1.92
DDX54-207ENST00000550016 KTN1Q86UP2 1357 aaKnown RBP27■■□□□ 1.91
DDX54-207ENST00000550016 TERF2IPQ9NYB0 399 aa27■■□□□ 1.91
DDX54-207ENST00000550016 CD163L1Q9NR16 1453 aa27■■□□□ 1.91
DDX54-207ENST00000550016 ADAMTS2O95450 1211 aa26.99■■□□□ 1.91
DDX54-207ENST00000550016 HDGFL2Q7Z4V5 671 aaPredicted RBP26.99■■□□□ 1.91
DDX54-207ENST00000550016 SSH2Q76I76 1423 aa26.99■■□□□ 1.91
DDX54-207ENST00000550016 ABTB2Q8N961 1025 aa26.98■■□□□ 1.91
DDX54-207ENST00000550016 CABLES1Q8TDN4 633 aa26.98■■□□□ 1.91
DDX54-207ENST00000550016 CRYBG1Q9Y4K1 1723 aa26.98■■□□□ 1.91
DDX54-207ENST00000550016 PLEKHG5O94827 1062 aa26.97■■□□□ 1.91
DDX54-207ENST00000550016 HAP1P54257 671 aaPredicted RBP26.97■■□□□ 1.91
DDX54-207ENST00000550016 NRKQ7Z2Y5 1582 aa26.97■■□□□ 1.91
DDX54-207ENST00000550016 MYOM1P52179 1685 aa26.95■■□□□ 1.9
DDX54-207ENST00000550016 TTC21BQ7Z4L5 1316 aa26.94■■□□□ 1.9
DDX54-207ENST00000550016 NUTM2GQ5VZR2 741 aa26.94■■□□□ 1.9
DDX54-207ENST00000550016 C8orf37Q96NL8 207 aa26.94■■□□□ 1.9
DDX54-207ENST00000550016 TTC21AQ8NDW8 1320 aa26.93■■□□□ 1.9
DDX54-207ENST00000550016 PIK3C2AO00443 1686 aa26.93■■□□□ 1.9
DDX54-207ENST00000550016 A0A1W2PP64 1363 aa26.93■■□□□ 1.9
DDX54-207ENST00000550016 PHRF1Q9P1Y6 1649 aaKnown RBP26.92■■□□□ 1.9
DDX54-207ENST00000550016 NLRP13Q86W25 1043 aa26.92■■□□□ 1.9
DDX54-207ENST00000550016 NGLY1Q96IV0 654 aa26.92■■□□□ 1.9
DDX54-207ENST00000550016 RGS17Q9UGC6 210 aaPredicted RBP26.91■■□□□ 1.9
DDX54-207ENST00000550016 EDC4Q6P2E9 1401 aaKnown RBP26.9■■□□□ 1.9
DDX54-207ENST00000550016 ANKRD36BQ8N2N9 1353 aa26.9■■□□□ 1.9
DDX54-207ENST00000550016 POLR3GLQ9BT43 218 aa26.89■■□□□ 1.9
DDX54-207ENST00000550016 C11orf95C9JLR9 678 aaPredicted RBP26.88■■□□□ 1.89
DDX54-207ENST00000550016 NLRP6P59044 892 aa26.88■■□□□ 1.89
DDX54-207ENST00000550016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.88■■□□□ 1.89
DDX54-207ENST00000550016 AFF2P51816 1311 aa26.88■■□□□ 1.89
DDX54-207ENST00000550016 USP19O94966 1318 aa26.87■■□□□ 1.89
DDX54-207ENST00000550016 ZNF772Q68DY9 489 aaPredicted RBP26.86■■□□□ 1.89
DDX54-207ENST00000550016 ZEB1P37275 1124 aaPredicted RBP26.84■■□□□ 1.89
DDX54-207ENST00000550016 FNBP4Q8N3X1 1017 aaPredicted RBP26.84■■□□□ 1.89
DDX54-207ENST00000550016 USP54Q70EL1 1684 aa26.82■■□□□ 1.88
DDX54-207ENST00000550016 PLCH1Q4KWH8 1693 aa26.82■■□□□ 1.88
DDX54-207ENST00000550016 COL14A1Q05707 1796 aaKnown RBP26.81■■□□□ 1.88
DDX54-207ENST00000550016 FAM83GA6ND36 823 aa26.81■■□□□ 1.88
DDX54-207ENST00000550016 GCP02774 474 aa26.81■■□□□ 1.88
DDX54-207ENST00000550016 NME9Q86XW9 330 aa26.81■■□□□ 1.88
DDX54-207ENST00000550016 NWD2Q9ULI1 1742 aa26.81■■□□□ 1.88
DDX54-207ENST00000550016 SLIT3O75094 1523 aa26.8■■□□□ 1.88
DDX54-207ENST00000550016 POTEAQ6S8J7 498 aa26.8■■□□□ 1.88
DDX54-207ENST00000550016 USP21Q9UK80 565 aa26.8■■□□□ 1.88
DDX54-207ENST00000550016 USP31Q70CQ4 1352 aa26.8■■□□□ 1.88
DDX54-207ENST00000550016 ZC3H6P61129 1189 aaKnown RBP26.79■■□□□ 1.88
DDX54-207ENST00000550016 ZRANB1Q9UGI0 708 aa26.79■■□□□ 1.88
DDX54-207ENST00000550016 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
DDX54-207ENST00000550016 KIF7Q2M1P5 1343 aa26.78■■□□□ 1.88
DDX54-207ENST00000550016 SLIT2O94813 1529 aa26.78■■□□□ 1.88
DDX54-207ENST00000550016 KIF20BQ96Q89 1820 aa26.77■■□□□ 1.88
DDX54-207ENST00000550016 KIAA0232Q92628 1395 aa26.77■■□□□ 1.88
DDX54-207ENST00000550016 CARD14Q9BXL6 1004 aa26.77■■□□□ 1.88
DDX54-207ENST00000550016 PRDM11Q9NQV5 511 aa26.77■■□□□ 1.88
DDX54-207ENST00000550016 BCL9LQ86UU0 1499 aa26.76■■□□□ 1.87
DDX54-207ENST00000550016 KCNH5Q8NCM2 988 aa26.76■■□□□ 1.87
DDX54-207ENST00000550016 QTRT2Q9H974 415 aaKnown RBP26.76■■□□□ 1.87
DDX54-207ENST00000550016 CPDO75976 1380 aa26.75■■□□□ 1.87
DDX54-207ENST00000550016 UNC5CLQ8IV45 518 aa26.73■■□□□ 1.87
DDX54-207ENST00000550016 NSD3Q9BZ95 1437 aa26.73■■□□□ 1.87
DDX54-207ENST00000550016 CHRNA2Q15822 529 aa26.72■■□□□ 1.87
DDX54-207ENST00000550016 PANK3Q9H999 370 aa26.72■■□□□ 1.87
DDX54-207ENST00000550016 TRPC5Q9UL62 973 aaPredicted RBP26.72■■□□□ 1.87
DDX54-207ENST00000550016 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 NRAPQ86VF7 1730 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 FYB1O15117 783 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 ILDR2Q71H61 639 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 BTG4Q9NY30 223 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 OVOS2A0A0J9YW53 1432 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 OVOS2Q6IE36 1432 aa26.71■■□□□ 1.87
DDX54-207ENST00000550016 NFAT5O94916 1531 aa26.7■■□□□ 1.87
DDX54-207ENST00000550016 COG3Q96JB2 828 aa26.7■■□□□ 1.86
DDX54-207ENST00000550016 ATRNO75882 1429 aa26.7■■□□□ 1.86
DDX54-207ENST00000550016 SOX12O15370 315 aa26.69■■□□□ 1.86
DDX54-207ENST00000550016 WASHC2AQ641Q2 1341 aa26.68■■□□□ 1.86
DDX54-207ENST00000550016 RXRBP28702 533 aa26.68■■□□□ 1.86
DDX54-207ENST00000550016 LMO7Q8WWI1 1683 aa26.68■■□□□ 1.86
DDX54-207ENST00000550016 LTN1O94822 1766 aa26.68■■□□□ 1.86
DDX54-207ENST00000550016 COL18A1P39060 1754 aa26.68■■□□□ 1.86
DDX54-207ENST00000550016 RGPD5Q99666 1765 aa26.67■■□□□ 1.86
DDX54-207ENST00000550016 ZBTB7CA1YPR0 619 aa26.66■■□□□ 1.86
DDX54-207ENST00000550016 RBM6P78332 1123 aaKnown RBP26.66■■□□□ 1.86
DDX54-207ENST00000550016 ARHGEF25Q86VW2 580 aa26.66■■□□□ 1.86
DDX54-207ENST00000550016 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
DDX54-207ENST00000550016 CGNL1Q0VF96 1302 aa26.65■■□□□ 1.86
DDX54-207ENST00000550016 AATKQ6ZMQ8 1374 aa26.65■■□□□ 1.86
DDX54-207ENST00000550016 CAMTA1Q9Y6Y1 1673 aa26.64■■□□□ 1.86
DDX54-207ENST00000550016 VPS72Q15906 364 aa26.64■■□□□ 1.86
DDX54-207ENST00000550016 ANKRD26Q9UPS8 1709 aa26.62■■□□□ 1.85
DDX54-207ENST00000550016 GJD4Q96KN9 370 aaPredicted RBP26.62■■□□□ 1.85
DDX54-207ENST00000550016 EVA1CP58658 441 aa26.61■■□□□ 1.85
DDX54-207ENST00000550016 CCDC9Q9Y3X0 531 aaKnown RBP26.6■■□□□ 1.85
DDX54-207ENST00000550016 STRN4Q9NRL3 753 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms