RNA–Protein interactions for RNA: ENST00000549874.1

KIRREL3-209, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 1 (best)

Gene KIRREL3, Length 1,507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-209ENST00000549874 KRT28Q7Z3Y7 464 aa22.16■■□□□ 1.14
KIRREL3-209ENST00000549874 ROBO1Q9Y6N7 1651 aa22.15■■□□□ 1.14
KIRREL3-209ENST00000549874 PIP4K2BP78356 416 aa22.14■■□□□ 1.13
KIRREL3-209ENST00000549874 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
KIRREL3-209ENST00000549874 NPC1L1Q9UHC9 1359 aa22.13■■□□□ 1.13
KIRREL3-209ENST00000549874 KIF20BQ96Q89 1820 aa22.13■■□□□ 1.13
KIRREL3-209ENST00000549874 FYB1O15117 783 aa22.13■■□□□ 1.13
KIRREL3-209ENST00000549874 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
KIRREL3-209ENST00000549874 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
KIRREL3-209ENST00000549874 ANP32CO43423 234 aa22.12■■□□□ 1.13
KIRREL3-209ENST00000549874 NME9Q86XW9 330 aa22.12■■□□□ 1.13
KIRREL3-209ENST00000549874 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
KIRREL3-209ENST00000549874 NHSL1Q5SYE7 1610 aa22.11■■□□□ 1.13
KIRREL3-209ENST00000549874 GGNBP2Q9H3C7 697 aa22.11■■□□□ 1.13
KIRREL3-209ENST00000549874 TRPM3Q9HCF6 1732 aaPredicted RBP22.1■■□□□ 1.13
KIRREL3-209ENST00000549874 NSD2O96028 1365 aa22.1■■□□□ 1.13
KIRREL3-209ENST00000549874 PXDNQ92626 1479 aa22.1■■□□□ 1.13
KIRREL3-209ENST00000549874 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
KIRREL3-209ENST00000549874 ZRANB1Q9UGI0 708 aa22.08■■□□□ 1.13
KIRREL3-209ENST00000549874 SOS2Q07890 1332 aaPredicted RBP22.08■■□□□ 1.12
KIRREL3-209ENST00000549874 ABTB2Q8N961 1025 aa22.07■■□□□ 1.12
KIRREL3-209ENST00000549874 PIK3C2AO00443 1686 aa22.07■■□□□ 1.12
KIRREL3-209ENST00000549874 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
KIRREL3-209ENST00000549874 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
KIRREL3-209ENST00000549874 RALBP1Q15311 655 aa22.06■■□□□ 1.12
KIRREL3-209ENST00000549874 MORC1Q86VD1 984 aa22.06■■□□□ 1.12
KIRREL3-209ENST00000549874 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
KIRREL3-209ENST00000549874 AHDC1Q5TGY3 1603 aaPredicted RBP22.05■■□□□ 1.12
KIRREL3-209ENST00000549874 NUTM2GQ5VZR2 741 aa22.05■■□□□ 1.12
KIRREL3-209ENST00000549874 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
KIRREL3-209ENST00000549874 COG3Q96JB2 828 aa22.05■■□□□ 1.12
KIRREL3-209ENST00000549874 NLRP6P59044 892 aa22.04■■□□□ 1.12
KIRREL3-209ENST00000549874 MIER1Q8N108 512 aa22.04■■□□□ 1.12
KIRREL3-209ENST00000549874 ALS2Q96Q42 1657 aa22.03■■□□□ 1.12
KIRREL3-209ENST00000549874 TNS3Q68CZ2 1445 aa22.03■■□□□ 1.12
KIRREL3-209ENST00000549874 SPATA31A3Q5VYP0 1347 aa22.03■■□□□ 1.12
KIRREL3-209ENST00000549874 USP31Q70CQ4 1352 aa22.03■■□□□ 1.12
KIRREL3-209ENST00000549874 OVOS2A0A0J9YW53 1432 aa22.02■■□□□ 1.11
KIRREL3-209ENST00000549874 OVOS2Q6IE36 1432 aa22.02■■□□□ 1.11
KIRREL3-209ENST00000549874 TNNT2P45379 298 aaPredicted RBP22.01■■□□□ 1.11
KIRREL3-209ENST00000549874 PHLPP1O60346 1717 aa22.01■■□□□ 1.11
KIRREL3-209ENST00000549874 NLRP13Q86W25 1043 aa22■■□□□ 1.11
KIRREL3-209ENST00000549874 MARF1Q9Y4F3 1742 aaKnown RBP21.99■■□□□ 1.11
KIRREL3-209ENST00000549874 USP54Q70EL1 1684 aa21.99■■□□□ 1.11
KIRREL3-209ENST00000549874 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
KIRREL3-209ENST00000549874 LRRC59Q96AG4 307 aaKnown RBP21.97■■□□□ 1.11
KIRREL3-209ENST00000549874 MYBBP1AQ9BQG0 1328 aaKnown RBP21.97■■□□□ 1.11
KIRREL3-209ENST00000549874 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
KIRREL3-209ENST00000549874 COL16A1Q07092 1604 aaPredicted RBP21.96■■□□□ 1.11
KIRREL3-209ENST00000549874 PPP2R1AP30153 589 aa21.96■■□□□ 1.11
KIRREL3-209ENST00000549874 SOX12O15370 315 aa21.95■■□□□ 1.1
KIRREL3-209ENST00000549874 FBLN1P23142 703 aa21.94■■□□□ 1.1
KIRREL3-209ENST00000549874 USP19O94966 1318 aa21.93■■□□□ 1.1
KIRREL3-209ENST00000549874 MAP2P11137 1827 aaKnown RBP21.92■■□□□ 1.1
KIRREL3-209ENST00000549874 AATKQ6ZMQ8 1374 aa21.92■■□□□ 1.1
KIRREL3-209ENST00000549874 MED1Q15648 1581 aaPredicted RBP21.92■■□□□ 1.1
KIRREL3-209ENST00000549874 SLIT3O75094 1523 aa21.91■■□□□ 1.1
KIRREL3-209ENST00000549874 KCNH5Q8NCM2 988 aa21.9■■□□□ 1.1
KIRREL3-209ENST00000549874 CABLES1Q8TDN4 633 aa21.9■■□□□ 1.1
KIRREL3-209ENST00000549874 GCP02774 474 aa21.9■■□□□ 1.1
KIRREL3-209ENST00000549874 RRS1Q15050 365 aaKnown RBP21.89■■□□□ 1.09
KIRREL3-209ENST00000549874 PNPLA6Q8IY17 1366 aa21.89■■□□□ 1.09
KIRREL3-209ENST00000549874 PHRF1Q9P1Y6 1649 aaKnown RBP21.88■■□□□ 1.09
KIRREL3-209ENST00000549874 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
KIRREL3-209ENST00000549874 CCER2I3L3R5 266 aa21.88■■□□□ 1.09
KIRREL3-209ENST00000549874 MTHFSP49914 203 aa21.88■■□□□ 1.09
KIRREL3-209ENST00000549874 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
KIRREL3-209ENST00000549874 NFAT5O94916 1531 aa21.87■■□□□ 1.09
KIRREL3-209ENST00000549874 HSPA1LP34931 641 aa21.87■■□□□ 1.09
KIRREL3-209ENST00000549874 CCDC184Q52MB2 194 aa21.86■■□□□ 1.09
KIRREL3-209ENST00000549874 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
KIRREL3-209ENST00000549874 PPM1GO15355 546 aaPredicted RBP21.85■■□□□ 1.09
KIRREL3-209ENST00000549874 COL22A1Q8NFW1 1626 aaPredicted RBP21.85■■□□□ 1.09
KIRREL3-209ENST00000549874 MAP3K19Q56UN5 1328 aa21.85■■□□□ 1.09
KIRREL3-209ENST00000549874 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
KIRREL3-209ENST00000549874 ABCA3Q99758 1704 aa21.84■■□□□ 1.09
KIRREL3-209ENST00000549874 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
KIRREL3-209ENST00000549874 LTN1O94822 1766 aa21.84■■□□□ 1.09
KIRREL3-209ENST00000549874 SMG6Q86US8 1419 aaKnown RBP21.83■■□□□ 1.08
KIRREL3-209ENST00000549874 ZBTB7CA1YPR0 619 aa21.82■■□□□ 1.08
KIRREL3-209ENST00000549874 ZC3H6P61129 1189 aaKnown RBP21.82■■□□□ 1.08
KIRREL3-209ENST00000549874 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
KIRREL3-209ENST00000549874 JCADQ9P266 1359 aa21.82■■□□□ 1.08
KIRREL3-209ENST00000549874 AMPHP49418 695 aa21.81■■□□□ 1.08
KIRREL3-209ENST00000549874 ARHGEF25Q86VW2 580 aa21.81■■□□□ 1.08
KIRREL3-209ENST00000549874 CFAP53Q96M91 514 aa21.8■■□□□ 1.08
KIRREL3-209ENST00000549874 PEAK1Q9H792 1746 aa21.8■■□□□ 1.08
KIRREL3-209ENST00000549874 CDK12Q9NYV4 1490 aaPredicted RBP21.79■■□□□ 1.08
KIRREL3-209ENST00000549874 FBXO41Q8TF61 875 aa21.78■■□□□ 1.08
KIRREL3-209ENST00000549874 CPDO75976 1380 aa21.78■■□□□ 1.08
KIRREL3-209ENST00000549874 FLT4P35916 1363 aa21.78■■□□□ 1.08
KIRREL3-209ENST00000549874 KIF24Q5T7B8 1368 aa21.78■■□□□ 1.08
KIRREL3-209ENST00000549874 KIAA0232Q92628 1395 aa21.78■■□□□ 1.08
KIRREL3-209ENST00000549874 HOXC9P31274 260 aa21.76■■□□□ 1.07
KIRREL3-209ENST00000549874 HSP90AB2PQ58FF8 381 aa21.76■■□□□ 1.07
KIRREL3-209ENST00000549874 IP6K1Q92551 441 aa21.76■■□□□ 1.07
KIRREL3-209ENST00000549874 RTL1A6NKG5 1358 aa21.76■■□□□ 1.07
KIRREL3-209ENST00000549874 INSRP06213 1382 aa21.76■■□□□ 1.07
KIRREL3-209ENST00000549874 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
KIRREL3-209ENST00000549874 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms