RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
GCN1-206ENST00000549815 TRPM1Q7Z4N2 1603 aa19.42■□□□□ 0.7
GCN1-206ENST00000549815 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
GCN1-206ENST00000549815 BRWD3Q6RI45 1802 aa19.4■□□□□ 0.7
GCN1-206ENST00000549815 PLEKHG3A1L390 1219 aa19.4■□□□□ 0.7
GCN1-206ENST00000549815 CCDC61Q9Y6R9 512 aa19.4■□□□□ 0.7
GCN1-206ENST00000549815 CENPJQ9HC77 1338 aaPredicted RBP19.4■□□□□ 0.7
GCN1-206ENST00000549815 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
GCN1-206ENST00000549815 ACEP12821 1306 aa19.39■□□□□ 0.69
GCN1-206ENST00000549815 ONECUT3O60422 494 aaPredicted RBP19.38■□□□□ 0.69
GCN1-206ENST00000549815 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
GCN1-206ENST00000549815 PHRF1Q9P1Y6 1649 aaKnown RBP19.38■□□□□ 0.69
GCN1-206ENST00000549815 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
GCN1-206ENST00000549815 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
GCN1-206ENST00000549815 SEPT12Q8IYM1 358 aa19.35■□□□□ 0.69
GCN1-206ENST00000549815 BTG4Q9NY30 223 aa19.35■□□□□ 0.69
GCN1-206ENST00000549815 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
GCN1-206ENST00000549815 CABP2Q9NPB3 220 aa19.33■□□□□ 0.68
GCN1-206ENST00000549815 SRPK2P78362 688 aaKnown RBP19.32■□□□□ 0.68
GCN1-206ENST00000549815 KIAA0232Q92628 1395 aa19.32■□□□□ 0.68
GCN1-206ENST00000549815 CCDC125Q86Z20 511 aa19.31■□□□□ 0.68
GCN1-206ENST00000549815 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
GCN1-206ENST00000549815 NRKQ7Z2Y5 1582 aa19.31■□□□□ 0.68
GCN1-206ENST00000549815 NUTM2GQ5VZR2 741 aa19.3■□□□□ 0.68
GCN1-206ENST00000549815 PRDM11Q9NQV5 511 aa19.3■□□□□ 0.68
GCN1-206ENST00000549815 ROCK2O75116 1388 aaKnown RBP19.3■□□□□ 0.68
GCN1-206ENST00000549815 SPATA31A5Q5VU36 1347 aa19.29■□□□□ 0.68
GCN1-206ENST00000549815 SPATA31A7Q8IWB4 1347 aa19.29■□□□□ 0.68
GCN1-206ENST00000549815 USP19O94966 1318 aa19.28■□□□□ 0.68
GCN1-206ENST00000549815 BRD4O60885 1362 aaPredicted RBP19.28■□□□□ 0.68
GCN1-206ENST00000549815 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.68
GCN1-206ENST00000549815 BLMP54132 1417 aaPredicted RBP19.27■□□□□ 0.68
GCN1-206ENST00000549815 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
GCN1-206ENST00000549815 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
GCN1-206ENST00000549815 CABP1Q9NZU7 370 aa19.27■□□□□ 0.68
GCN1-206ENST00000549815 USP6P35125 1406 aa19.26■□□□□ 0.67
GCN1-206ENST00000549815 SSH2Q76I76 1423 aa19.26■□□□□ 0.67
GCN1-206ENST00000549815 ZC3H6P61129 1189 aaKnown RBP19.26■□□□□ 0.67
GCN1-206ENST00000549815 CHRNA2Q15822 529 aa19.26■□□□□ 0.67
GCN1-206ENST00000549815 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
GCN1-206ENST00000549815 LMO7Q8WWI1 1683 aa19.26■□□□□ 0.67
GCN1-206ENST00000549815 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
GCN1-206ENST00000549815 CPDO75976 1380 aa19.25■□□□□ 0.67
GCN1-206ENST00000549815 SPATA31A1Q5TZJ5 1347 aa19.24■□□□□ 0.67
GCN1-206ENST00000549815 CAMTA1Q9Y6Y1 1673 aa19.24■□□□□ 0.67
GCN1-206ENST00000549815 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
GCN1-206ENST00000549815 AKAP12Q02952 1782 aa19.21■□□□□ 0.67
GCN1-206ENST00000549815 SLIT3O75094 1523 aa19.21■□□□□ 0.67
GCN1-206ENST00000549815 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
GCN1-206ENST00000549815 GCP02774 474 aa19.21■□□□□ 0.67
GCN1-206ENST00000549815 SRCAPQ6ZRS2 3230 aa19.21■□□□□ 0.67
GCN1-206ENST00000549815 SBNO2Q9Y2G9 1366 aa19.2■□□□□ 0.66
GCN1-206ENST00000549815 A0A0G2JS52 829 aa19.19■□□□□ 0.66
GCN1-206ENST00000549815 MYT1Q01538 1121 aa19.19■□□□□ 0.66
GCN1-206ENST00000549815 DEFB132Q7Z7B7 95 aa19.19■□□□□ 0.66
GCN1-206ENST00000549815 STRN4Q9NRL3 753 aa19.19■□□□□ 0.66
GCN1-206ENST00000549815 TONSLQ96HA7 1378 aa19.18■□□□□ 0.66
GCN1-206ENST00000549815 CPSF1Q10570 1443 aaKnown RBP19.17■□□□□ 0.66
GCN1-206ENST00000549815 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
GCN1-206ENST00000549815 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
GCN1-206ENST00000549815 NLRP6P59044 892 aa19.16■□□□□ 0.66
GCN1-206ENST00000549815 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
GCN1-206ENST00000549815 ZRANB1Q9UGI0 708 aa19.16■□□□□ 0.66
GCN1-206ENST00000549815 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
GCN1-206ENST00000549815 COL18A1P39060 1754 aa19.15■□□□□ 0.66
GCN1-206ENST00000549815 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
GCN1-206ENST00000549815 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
GCN1-206ENST00000549815 BARGINQ6ZT62 677 aa19.15■□□□□ 0.66
GCN1-206ENST00000549815 TTC21BQ7Z4L5 1316 aa19.15■□□□□ 0.66
GCN1-206ENST00000549815 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.66
GCN1-206ENST00000549815 MON2Q7Z3U7 1717 aa19.14■□□□□ 0.66
GCN1-206ENST00000549815 EVA1CP58658 441 aa19.14■□□□□ 0.65
GCN1-206ENST00000549815 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
GCN1-206ENST00000549815 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
GCN1-206ENST00000549815 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
GCN1-206ENST00000549815 TNS1Q9HBL0 1735 aaKnown RBP19.13■□□□□ 0.65
GCN1-206ENST00000549815 USP35Q9P2H5 1018 aa19.12■□□□□ 0.65
GCN1-206ENST00000549815 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
GCN1-206ENST00000549815 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
GCN1-206ENST00000549815 THRAP3Q9Y2W1 955 aaKnown RBP19.1■□□□□ 0.65
GCN1-206ENST00000549815 DISP2A7MBM2 1401 aa19.09■□□□□ 0.65
GCN1-206ENST00000549815 CRB1P82279 1406 aa19.09■□□□□ 0.65
GCN1-206ENST00000549815 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
GCN1-206ENST00000549815 PARP4Q9UKK3 1724 aaKnown RBP19.09■□□□□ 0.65
GCN1-206ENST00000549815 USP54Q70EL1 1684 aa19.09■□□□□ 0.65
GCN1-206ENST00000549815 NFAT5O94916 1531 aa19.09■□□□□ 0.65
GCN1-206ENST00000549815 BAG6P46379 1132 aa19.08■□□□□ 0.64
GCN1-206ENST00000549815 ARHGEF25Q86VW2 580 aa19.07■□□□□ 0.64
GCN1-206ENST00000549815 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
GCN1-206ENST00000549815 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
GCN1-206ENST00000549815 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
GCN1-206ENST00000549815 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
GCN1-206ENST00000549815 FAM196AQ6ZSG2 479 aa19.06■□□□□ 0.64
GCN1-206ENST00000549815 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
GCN1-206ENST00000549815 PUS7Q96PZ0 661 aaKnown RBP19.06■□□□□ 0.64
GCN1-206ENST00000549815 TESK2Q96S53 571 aa19.06■□□□□ 0.64
GCN1-206ENST00000549815 EN1Q05925 392 aaPredicted RBP19.05■□□□□ 0.64
GCN1-206ENST00000549815 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
GCN1-206ENST00000549815 PDE3BQ13370 1112 aa19.04■□□□□ 0.64
GCN1-206ENST00000549815 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms