RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 SNRPBP14678 240 aaKnown RBP10.4□□□□□ -0.75
ATP2B1-206ENST00000549727 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.75
ATP2B1-206ENST00000549727 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
ATP2B1-206ENST00000549727 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
ATP2B1-206ENST00000549727 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
ATP2B1-206ENST00000549727 LILRB3O75022 631 aa10.38□□□□□ -0.75
ATP2B1-206ENST00000549727 CTHP32929 405 aa10.38□□□□□ -0.75
ATP2B1-206ENST00000549727 PRPF38BQ5VTL8 546 aaKnown RBP10.38□□□□□ -0.75
ATP2B1-206ENST00000549727 FOXJ1Q92949 421 aa10.37□□□□□ -0.75
ATP2B1-206ENST00000549727 TLL2Q9Y6L7 1015 aa10.37□□□□□ -0.75
ATP2B1-206ENST00000549727 POLR3EQ9NVU0 708 aa10.36□□□□□ -0.75
ATP2B1-206ENST00000549727 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
ATP2B1-206ENST00000549727 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
ATP2B1-206ENST00000549727 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
ATP2B1-206ENST00000549727 TREML4Q6UXN2 200 aa10.34□□□□□ -0.75
ATP2B1-206ENST00000549727 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 TRIM46Q7Z4K8 759 aa10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 TSC1Q92574 1164 aa10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
ATP2B1-206ENST00000549727 BMP1P13497 986 aa10.32□□□□□ -0.76
ATP2B1-206ENST00000549727 VARSP26640 1264 aaKnown RBP10.32□□□□□ -0.76
ATP2B1-206ENST00000549727 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
ATP2B1-206ENST00000549727 WASF2Q9Y6W5 498 aa10.32□□□□□ -0.76
ATP2B1-206ENST00000549727 CLK2P49760 499 aaKnown RBP10.31□□□□□ -0.76
ATP2B1-206ENST00000549727 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
ATP2B1-206ENST00000549727 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
ATP2B1-206ENST00000549727 FAM117AQ9C073 453 aa10.3□□□□□ -0.76
ATP2B1-206ENST00000549727 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
ATP2B1-206ENST00000549727 CTDSPL2Q05D32 466 aa10.28□□□□□ -0.76
ATP2B1-206ENST00000549727 KLF16Q9BXK1 252 aaPredicted RBP10.28□□□□□ -0.76
ATP2B1-206ENST00000549727 NNTQ13423 1086 aa10.27□□□□□ -0.77
ATP2B1-206ENST00000549727 MPNDQ8N594 471 aa10.27□□□□□ -0.77
ATP2B1-206ENST00000549727 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
ATP2B1-206ENST00000549727 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
ATP2B1-206ENST00000549727 CDK15Q96Q40 435 aa10.25□□□□□ -0.77
ATP2B1-206ENST00000549727 WFS1O76024 890 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 TIMP2P16035 220 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 GRM5P41594 1212 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 SENP2Q9HC62 589 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 NR3C2P08235 984 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 ARID5BQ14865 1188 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
ATP2B1-206ENST00000549727 SH3RF1Q7Z6J0 888 aa10.23□□□□□ -0.77
ATP2B1-206ENST00000549727 FAM174AQ8TBP5 190 aa10.23□□□□□ -0.77
ATP2B1-206ENST00000549727 LRRN4Q8WUT4 740 aa10.23□□□□□ -0.77
ATP2B1-206ENST00000549727 BCANQ96GW7 911 aa10.23□□□□□ -0.77
ATP2B1-206ENST00000549727 SKIV2LQ15477 1246 aaKnown RBP10.22□□□□□ -0.77
ATP2B1-206ENST00000549727 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
ATP2B1-206ENST00000549727 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
ATP2B1-206ENST00000549727 TERTO14746 1132 aaKnown RBP10.21□□□□□ -0.78
ATP2B1-206ENST00000549727 ADH1CP00326 375 aa10.21□□□□□ -0.78
ATP2B1-206ENST00000549727 WDR4P57081 412 aaKnown RBP10.21□□□□□ -0.78
ATP2B1-206ENST00000549727 AGERQ15109 404 aa10.2□□□□□ -0.78
ATP2B1-206ENST00000549727 SH3BP5LQ7L8J4 393 aa10.2□□□□□ -0.78
ATP2B1-206ENST00000549727 HELBQ8NG08 1087 aaPredicted RBP10.2□□□□□ -0.78
ATP2B1-206ENST00000549727 KIFC2Q96AC6 838 aa10.2□□□□□ -0.78
ATP2B1-206ENST00000549727 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
ATP2B1-206ENST00000549727 BPHLQ86WA6 291 aaPredicted RBP10.19□□□□□ -0.78
ATP2B1-206ENST00000549727 ITPKCQ96DU7 683 aa10.19□□□□□ -0.78
ATP2B1-206ENST00000549727 C1QTNF2Q9BXJ5 285 aa10.19□□□□□ -0.78
ATP2B1-206ENST00000549727 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
ATP2B1-206ENST00000549727 SOBPA7XYQ1 873 aa10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 PPP2R2DQ66LE6 453 aa10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 EPS8L1Q8TE68 723 aa10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 VEGFBP49765 207 aa10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 NR6A1Q15406 480 aa10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 OCSTAMPQ9BR26 566 aa10.16□□□□□ -0.78
ATP2B1-206ENST00000549727 MAGEB6P1A0A0J9YX57 407 aa10.15□□□□□ -0.79
ATP2B1-206ENST00000549727 ARMC2Q8NEN0 867 aa10.14□□□□□ -0.79
ATP2B1-206ENST00000549727 DDRGK1Q96HY6 314 aa10.14□□□□□ -0.79
ATP2B1-206ENST00000549727 CARD14Q9BXL6 1004 aa10.14□□□□□ -0.79
ATP2B1-206ENST00000549727 NR5A1Q13285 461 aa10.13□□□□□ -0.79
ATP2B1-206ENST00000549727 WIPF1O43516 503 aa10.12□□□□□ -0.79
ATP2B1-206ENST00000549727 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
ATP2B1-206ENST00000549727 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
ATP2B1-206ENST00000549727 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
ATP2B1-206ENST00000549727 TRMT44Q8IYL2 757 aaKnown RBP10.11□□□□□ -0.79
ATP2B1-206ENST00000549727 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
ATP2B1-206ENST00000549727 AP1G2O75843 785 aa10.1□□□□□ -0.79
ATP2B1-206ENST00000549727 FSHRP23945 695 aa10.1□□□□□ -0.79
ATP2B1-206ENST00000549727 VASH1Q7L8A9 365 aaPredicted RBP10.1□□□□□ -0.79
ATP2B1-206ENST00000549727 FKBPLQ9UIM3 349 aa10.1□□□□□ -0.79
ATP2B1-206ENST00000549727 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
ATP2B1-206ENST00000549727 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
ATP2B1-206ENST00000549727 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
ATP2B1-206ENST00000549727 MAP4K5Q9Y4K4 846 aa10.08□□□□□ -0.8
ATP2B1-206ENST00000549727 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
ATP2B1-206ENST00000549727 SCARF1Q14162 830 aa10.07□□□□□ -0.8
ATP2B1-206ENST00000549727 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.87e-6■■■■■ 33.4
ATP2B1-206ENST00000549727 LORP23490 312 aaPredicted RBP10.06□□□□□ -0.8
ATP2B1-206ENST00000549727 GMPRP36959 345 aa10.06□□□□□ -0.8
ATP2B1-206ENST00000549727 ARHGAP9Q9BRR9 750 aa10.06□□□□□ -0.8
ATP2B1-206ENST00000549727 RFC5P40937 340 aa10.05□□□□□ -0.8
ATP2B1-206ENST00000549727 CBLBQ13191 982 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms