RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 SALL2Q9Y467 1007 aaPredicted RBP10.22□□□□□ -0.77
COX6A1-202ENST00000549525 CYB5RLQ6IPT4 315 aa10.21□□□□□ -0.77
COX6A1-202ENST00000549525 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.77
COX6A1-202ENST00000549525 SAMD9Q5K651 1589 aa10.21□□□□□ -0.78
COX6A1-202ENST00000549525 KIAA0556O60303 1618 aa10.21□□□□□ -0.78
COX6A1-202ENST00000549525 SPTLC1O15269 473 aa10.2□□□□□ -0.78
COX6A1-202ENST00000549525 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
COX6A1-202ENST00000549525 DIXDC1Q155Q3 683 aa10.2□□□□□ -0.78
COX6A1-202ENST00000549525 FAM160A2Q8N612 972 aaPredicted RBP10.2□□□□□ -0.78
COX6A1-202ENST00000549525 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
COX6A1-202ENST00000549525 ARHGAP35Q9NRY4 1499 aa10.2□□□□□ -0.78
COX6A1-202ENST00000549525 LIMD1Q9UGP4 676 aa10.2□□□□□ -0.78
COX6A1-202ENST00000549525 PCDHB15Q9Y5E8 787 aa10.2□□□□□ -0.78
COX6A1-202ENST00000549525 TTBK1Q5TCY1 1321 aaPredicted RBP10.19□□□□□ -0.78
COX6A1-202ENST00000549525 Q3C1V9 767 aa10.19□□□□□ -0.78
COX6A1-202ENST00000549525 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
COX6A1-202ENST00000549525 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
COX6A1-202ENST00000549525 S1PR4O95977 384 aa10.18□□□□□ -0.78
COX6A1-202ENST00000549525 GJA5P36382 358 aa10.18□□□□□ -0.78
COX6A1-202ENST00000549525 IL27Q8NEV9 243 aa10.18□□□□□ -0.78
COX6A1-202ENST00000549525 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
COX6A1-202ENST00000549525 CDK11AQ9UQ88 783 aaPredicted RBP10.18□□□□□ -0.78
COX6A1-202ENST00000549525 FHOD3Q2V2M9 1422 aa10.17□□□□□ -0.78
COX6A1-202ENST00000549525 UACAQ9BZF9 1416 aa10.17□□□□□ -0.78
COX6A1-202ENST00000549525 RIMBP3CA6NJZ7 1639 aa10.17□□□□□ -0.78
COX6A1-202ENST00000549525 RIMBP3BA6NNM3 1639 aa10.17□□□□□ -0.78
COX6A1-202ENST00000549525 RIMBP3Q9UFD9 1639 aa10.17□□□□□ -0.78
COX6A1-202ENST00000549525 SH3D19Q5HYK7 790 aa10.16□□□□□ -0.78
COX6A1-202ENST00000549525 POLR3EQ9NVU0 708 aa10.16□□□□□ -0.78
COX6A1-202ENST00000549525 ATP1B4Q9UN42 357 aaPredicted RBP10.16□□□□□ -0.78
COX6A1-202ENST00000549525 MSS51Q4VC12 460 aa10.15□□□□□ -0.78
COX6A1-202ENST00000549525 USB1Q9BQ65 265 aaKnown RBP10.15□□□□□ -0.78
COX6A1-202ENST00000549525 SLC6A16Q9GZN6 736 aa10.15□□□□□ -0.78
COX6A1-202ENST00000549525 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
COX6A1-202ENST00000549525 RNF223E7ERA6 249 aa10.14□□□□□ -0.79
COX6A1-202ENST00000549525 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
COX6A1-202ENST00000549525 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
COX6A1-202ENST00000549525 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
COX6A1-202ENST00000549525 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.14□□□□□ -0.79
COX6A1-202ENST00000549525 UHRF1BP1LA0JNW5 1464 aa10.14□□□□□ -0.79
COX6A1-202ENST00000549525 ERCC6L2Q5T890 1561 aa10.14□□□□□ -0.79
COX6A1-202ENST00000549525 ARAP1Q96P48 1450 aa10.13□□□□□ -0.79
COX6A1-202ENST00000549525 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
COX6A1-202ENST00000549525 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
COX6A1-202ENST00000549525 QPCTQ16769 361 aa10.13□□□□□ -0.79
COX6A1-202ENST00000549525 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
COX6A1-202ENST00000549525 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
COX6A1-202ENST00000549525 VPS8Q8N3P4 1428 aa10.13□□□□□ -0.79
COX6A1-202ENST00000549525 CASKIN1Q8WXD9 1431 aa10.13□□□□□ -0.79
COX6A1-202ENST00000549525 MTMR2Q13614 643 aa10.12□□□□□ -0.79
COX6A1-202ENST00000549525 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
COX6A1-202ENST00000549525 RETREG3Q86VR2 466 aa10.12□□□□□ -0.79
COX6A1-202ENST00000549525 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
COX6A1-202ENST00000549525 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
COX6A1-202ENST00000549525 PLEKHD1A6NEE1 506 aa10.11□□□□□ -0.79
COX6A1-202ENST00000549525 HRCP23327 699 aa10.11□□□□□ -0.79
COX6A1-202ENST00000549525 ABCC2Q92887 1545 aa10.11□□□□□ -0.79
COX6A1-202ENST00000549525 LILRB3O75022 631 aa10.1□□□□□ -0.79
COX6A1-202ENST00000549525 GGCXP38435 758 aa10.1□□□□□ -0.79
COX6A1-202ENST00000549525 MMP16P51512 607 aa10.1□□□□□ -0.79
COX6A1-202ENST00000549525 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
COX6A1-202ENST00000549525 CCDC18Q5T9S5 1454 aa10.1□□□□□ -0.79
COX6A1-202ENST00000549525 PLB1Q6P1J6 1458 aa10.1□□□□□ -0.79
COX6A1-202ENST00000549525 HECW1Q76N89 1606 aa10.09□□□□□ -0.79
COX6A1-202ENST00000549525 RAPGEF6Q8TEU7 1601 aa10.09□□□□□ -0.79
COX6A1-202ENST00000549525 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
COX6A1-202ENST00000549525 DXOO77932 396 aaKnown RBP10.09□□□□□ -0.79
COX6A1-202ENST00000549525 EMID1Q96A84 441 aaPredicted RBP10.09□□□□□ -0.79
COX6A1-202ENST00000549525 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
COX6A1-202ENST00000549525 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
COX6A1-202ENST00000549525 ABCA8O94911 1581 aa10.09□□□□□ -0.79
COX6A1-202ENST00000549525 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
COX6A1-202ENST00000549525 PRR7Q8TB68 274 aa10.08□□□□□ -0.8
COX6A1-202ENST00000549525 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
COX6A1-202ENST00000549525 JUNDP17535 347 aa10.07□□□□□ -0.8
COX6A1-202ENST00000549525 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
COX6A1-202ENST00000549525 ANKLE1Q8NAG6 615 aa10.07□□□□□ -0.8
COX6A1-202ENST00000549525 KDM5BQ9UGL1 1544 aa10.07□□□□□ -0.8
COX6A1-202ENST00000549525 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
COX6A1-202ENST00000549525 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
COX6A1-202ENST00000549525 NUP153P49790 1475 aaKnown RBP10.05□□□□□ -0.8
COX6A1-202ENST00000549525 EPRSP07814 1512 aaKnown RBP10.05□□□□□ -0.8
COX6A1-202ENST00000549525 ATP10BO94823 1461 aa10.04□□□□□ -0.8
COX6A1-202ENST00000549525 ADCY10Q96PN6 1610 aa10.04□□□□□ -0.8
COX6A1-202ENST00000549525 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
COX6A1-202ENST00000549525 MTUS2Q5JR59 1369 aa10.03□□□□□ -0.8
COX6A1-202ENST00000549525 NUTM2BA6NNL0 878 aaPredicted RBP10.03□□□□□ -0.8
COX6A1-202ENST00000549525 NUTM2EB1AL46 878 aaPredicted RBP10.03□□□□□ -0.8
COX6A1-202ENST00000549525 NUTM2DQ5VT03 806 aaPredicted RBP10.03□□□□□ -0.8
COX6A1-202ENST00000549525 NUTM2AQ8IVF1 878 aaPredicted RBP10.03□□□□□ -0.8
COX6A1-202ENST00000549525 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.81
COX6A1-202ENST00000549525 ARID3CA6NKF2 412 aa10.02□□□□□ -0.81
COX6A1-202ENST00000549525 RGS20O76081 388 aa10.02□□□□□ -0.81
COX6A1-202ENST00000549525 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
COX6A1-202ENST00000549525 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
COX6A1-202ENST00000549525 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
COX6A1-202ENST00000549525 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
COX6A1-202ENST00000549525 PRKD2Q9BZL6 878 aa10.01□□□□□ -0.81
COX6A1-202ENST00000549525 MAPKBP1O60336 1514 aa10.01□□□□□ -0.81
COX6A1-202ENST00000549525 ASXL2Q76L83 1435 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms