RNA–Protein interactions for RNA: ENST00000549500.1

PCED1B-204, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 3

Gene PCED1B, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-204ENST00000549500 NRAPQ86VF7 1730 aa18.83■□□□□ 0.61
PCED1B-204ENST00000549500 POLR3AO14802 1390 aaPredicted RBP18.83■□□□□ 0.61
PCED1B-204ENST00000549500 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
PCED1B-204ENST00000549500 BRWD3Q6RI45 1802 aa18.81■□□□□ 0.6
PCED1B-204ENST00000549500 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
PCED1B-204ENST00000549500 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
PCED1B-204ENST00000549500 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
PCED1B-204ENST00000549500 ACEP12821 1306 aa18.8■□□□□ 0.6
PCED1B-204ENST00000549500 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
PCED1B-204ENST00000549500 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
PCED1B-204ENST00000549500 PHRF1Q9P1Y6 1649 aaKnown RBP18.79■□□□□ 0.6
PCED1B-204ENST00000549500 COL14A1Q05707 1796 aaKnown RBP18.79■□□□□ 0.6
PCED1B-204ENST00000549500 VPS72Q15906 364 aa18.79■□□□□ 0.6
PCED1B-204ENST00000549500 NBPF8Q3BBV2 869 aa18.79■□□□□ 0.6
PCED1B-204ENST00000549500 CABP2Q9NPB3 220 aa18.79■□□□□ 0.6
PCED1B-204ENST00000549500 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
PCED1B-204ENST00000549500 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
PCED1B-204ENST00000549500 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
PCED1B-204ENST00000549500 SRPK2P78362 688 aaKnown RBP18.75■□□□□ 0.59
PCED1B-204ENST00000549500 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
PCED1B-204ENST00000549500 ONECUT3O60422 494 aaPredicted RBP18.74■□□□□ 0.59
PCED1B-204ENST00000549500 ADRA2BP18089 450 aa18.74■□□□□ 0.59
PCED1B-204ENST00000549500 KIAA0232Q92628 1395 aa18.73■□□□□ 0.59
PCED1B-204ENST00000549500 SEPT12Q8IYM1 358 aa18.73■□□□□ 0.59
PCED1B-204ENST00000549500 NRKQ7Z2Y5 1582 aa18.72■□□□□ 0.59
PCED1B-204ENST00000549500 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.59
PCED1B-204ENST00000549500 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
PCED1B-204ENST00000549500 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
PCED1B-204ENST00000549500 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
PCED1B-204ENST00000549500 USP19O94966 1318 aa18.7■□□□□ 0.58
PCED1B-204ENST00000549500 ZC3H6P61129 1189 aaKnown RBP18.69■□□□□ 0.58
PCED1B-204ENST00000549500 USP6P35125 1406 aa18.68■□□□□ 0.58
PCED1B-204ENST00000549500 SSH2Q76I76 1423 aa18.68■□□□□ 0.58
PCED1B-204ENST00000549500 TRIM26Q12899 539 aaPredicted RBP18.68■□□□□ 0.58
PCED1B-204ENST00000549500 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
PCED1B-204ENST00000549500 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
PCED1B-204ENST00000549500 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
PCED1B-204ENST00000549500 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
PCED1B-204ENST00000549500 EVC2Q86UK5 1308 aa18.67■□□□□ 0.58
PCED1B-204ENST00000549500 LMO7Q8WWI1 1683 aa18.66■□□□□ 0.58
PCED1B-204ENST00000549500 THSD7AQ9UPZ6 1657 aa18.66■□□□□ 0.58
PCED1B-204ENST00000549500 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
PCED1B-204ENST00000549500 CAMTA1Q9Y6Y1 1673 aa18.65■□□□□ 0.58
PCED1B-204ENST00000549500 AKAP12Q02952 1782 aa18.65■□□□□ 0.58
PCED1B-204ENST00000549500 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
PCED1B-204ENST00000549500 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
PCED1B-204ENST00000549500 CPDO75976 1380 aa18.64■□□□□ 0.57
PCED1B-204ENST00000549500 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
PCED1B-204ENST00000549500 BLMP54132 1417 aaPredicted RBP18.64■□□□□ 0.57
PCED1B-204ENST00000549500 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
PCED1B-204ENST00000549500 SPATA31A1Q5TZJ5 1347 aa18.63■□□□□ 0.57
PCED1B-204ENST00000549500 SBNO2Q9Y2G9 1366 aa18.63■□□□□ 0.57
PCED1B-204ENST00000549500 GCP02774 474 aa18.62■□□□□ 0.57
PCED1B-204ENST00000549500 CARD11Q9BXL7 1154 aa18.62■□□□□ 0.57
PCED1B-204ENST00000549500 SLIT3O75094 1523 aa18.62■□□□□ 0.57
PCED1B-204ENST00000549500 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
PCED1B-204ENST00000549500 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
PCED1B-204ENST00000549500 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
PCED1B-204ENST00000549500 A0A0G2JS52 829 aa18.6■□□□□ 0.57
PCED1B-204ENST00000549500 MYT1Q01538 1121 aa18.6■□□□□ 0.57
PCED1B-204ENST00000549500 FAM182BQ5T319 152 aa18.59■□□□□ 0.57
PCED1B-204ENST00000549500 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
PCED1B-204ENST00000549500 MON2Q7Z3U7 1717 aa18.58■□□□□ 0.57
PCED1B-204ENST00000549500 TTC21BQ7Z4L5 1316 aa18.58■□□□□ 0.57
PCED1B-204ENST00000549500 NLRP6P59044 892 aa18.58■□□□□ 0.56
PCED1B-204ENST00000549500 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
PCED1B-204ENST00000549500 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.56
PCED1B-204ENST00000549500 COL18A1P39060 1754 aa18.58■□□□□ 0.56
PCED1B-204ENST00000549500 COL5A2P05997 1499 aaPredicted RBP18.57■□□□□ 0.56
PCED1B-204ENST00000549500 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
PCED1B-204ENST00000549500 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
PCED1B-204ENST00000549500 KTN1Q86UP2 1357 aaKnown RBP18.54■□□□□ 0.56
PCED1B-204ENST00000549500 EVA1CP58658 441 aa18.53■□□□□ 0.56
PCED1B-204ENST00000549500 TESK2Q96S53 571 aa18.53■□□□□ 0.56
PCED1B-204ENST00000549500 TNS1Q9HBL0 1735 aaKnown RBP18.53■□□□□ 0.56
PCED1B-204ENST00000549500 NFAT5O94916 1531 aa18.53■□□□□ 0.56
PCED1B-204ENST00000549500 AATKQ6ZMQ8 1374 aa18.53■□□□□ 0.56
PCED1B-204ENST00000549500 BARGINQ6ZT62 677 aa18.52■□□□□ 0.56
PCED1B-204ENST00000549500 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
PCED1B-204ENST00000549500 RGPD5Q99666 1765 aa18.52■□□□□ 0.55
PCED1B-204ENST00000549500 RGPD1P0DJD0 1748 aa18.52■□□□□ 0.55
PCED1B-204ENST00000549500 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
PCED1B-204ENST00000549500 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
PCED1B-204ENST00000549500 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
PCED1B-204ENST00000549500 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
PCED1B-204ENST00000549500 TCP11L2Q8N4U5 519 aa18.5■□□□□ 0.55
PCED1B-204ENST00000549500 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
PCED1B-204ENST00000549500 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
PCED1B-204ENST00000549500 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
PCED1B-204ENST00000549500 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
PCED1B-204ENST00000549500 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
PCED1B-204ENST00000549500 CRB1P82279 1406 aa18.49■□□□□ 0.55
PCED1B-204ENST00000549500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCED1B-204ENST00000549500 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
PCED1B-204ENST00000549500 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
PCED1B-204ENST00000549500 SOX12O15370 315 aa18.47■□□□□ 0.55
PCED1B-204ENST00000549500 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
PCED1B-204ENST00000549500 NME9Q86XW9 330 aa18.46■□□□□ 0.55
PCED1B-204ENST00000549500 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
PCED1B-204ENST00000549500 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms