RNA–Protein interactions for RNA: ENST00000549425.5

TMEM116-207, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-207ENST00000549425 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
TMEM116-207ENST00000549425 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
TMEM116-207ENST00000549425 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
TMEM116-207ENST00000549425 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
TMEM116-207ENST00000549425 RGPD8O14715 1765 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-207ENST00000549425 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
TMEM116-207ENST00000549425 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-207ENST00000549425 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
TMEM116-207ENST00000549425 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.29
TMEM116-207ENST00000549425 TECPR2O15040 1411 aa13.27□□□□□ -0.29
TMEM116-207ENST00000549425 CLTCL1P53675 1640 aa13.27□□□□□ -0.29
TMEM116-207ENST00000549425 KIF1BO60333 1816 aa13.26□□□□□ -0.29
TMEM116-207ENST00000549425 PRELPP51888 382 aa13.26□□□□□ -0.29
TMEM116-207ENST00000549425 ARXQ96QS3 562 aa13.26□□□□□ -0.29
TMEM116-207ENST00000549425 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
TMEM116-207ENST00000549425 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
TMEM116-207ENST00000549425 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
TMEM116-207ENST00000549425 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
TMEM116-207ENST00000549425 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
TMEM116-207ENST00000549425 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
TMEM116-207ENST00000549425 COL13A1Q5TAT6 717 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-207ENST00000549425 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
TMEM116-207ENST00000549425 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
TMEM116-207ENST00000549425 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
TMEM116-207ENST00000549425 NUP155O75694 1391 aa13.24□□□□□ -0.29
TMEM116-207ENST00000549425 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
TMEM116-207ENST00000549425 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
TMEM116-207ENST00000549425 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
TMEM116-207ENST00000549425 GPBP1L1Q9HC44 474 aaPredicted RBP13.23□□□□□ -0.29
TMEM116-207ENST00000549425 STK32BQ9NY57 414 aa13.23□□□□□ -0.29
TMEM116-207ENST00000549425 PLSCR1O15162 318 aa13.22□□□□□ -0.29
TMEM116-207ENST00000549425 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
TMEM116-207ENST00000549425 STK26Q9P289 416 aa13.22□□□□□ -0.29
TMEM116-207ENST00000549425 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-207ENST00000549425 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
TMEM116-207ENST00000549425 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
TMEM116-207ENST00000549425 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
TMEM116-207ENST00000549425 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
TMEM116-207ENST00000549425 OVOS2A0A0G2JMS6 1433 aa13.2□□□□□ -0.3
TMEM116-207ENST00000549425 OVOS2A0A0J9YW53 1432 aa13.2□□□□□ -0.3
TMEM116-207ENST00000549425 OVOS2Q6IE36 1432 aa13.2□□□□□ -0.3
TMEM116-207ENST00000549425 SBF2Q86WG5 1849 aa13.2□□□□□ -0.3
TMEM116-207ENST00000549425 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
TMEM116-207ENST00000549425 C11orf95C9JLR9 678 aaPredicted RBP13.18□□□□□ -0.3
TMEM116-207ENST00000549425 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
TMEM116-207ENST00000549425 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
TMEM116-207ENST00000549425 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
TMEM116-207ENST00000549425 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
TMEM116-207ENST00000549425 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
TMEM116-207ENST00000549425 PPLO60437 1756 aa13.17□□□□□ -0.3
TMEM116-207ENST00000549425 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
TMEM116-207ENST00000549425 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
TMEM116-207ENST00000549425 APLP1P51693 650 aa13.17□□□□□ -0.3
TMEM116-207ENST00000549425 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
TMEM116-207ENST00000549425 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
TMEM116-207ENST00000549425 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
TMEM116-207ENST00000549425 EVA1CP58658 441 aa13.15□□□□□ -0.3
TMEM116-207ENST00000549425 PROM2Q8N271 834 aa13.15□□□□□ -0.3
TMEM116-207ENST00000549425 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
TMEM116-207ENST00000549425 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
TMEM116-207ENST00000549425 GPRASP1Q5JY77 1395 aa13.14□□□□□ -0.31
TMEM116-207ENST00000549425 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
TMEM116-207ENST00000549425 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
TMEM116-207ENST00000549425 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
TMEM116-207ENST00000549425 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
TMEM116-207ENST00000549425 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
TMEM116-207ENST00000549425 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
TMEM116-207ENST00000549425 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
TMEM116-207ENST00000549425 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
TMEM116-207ENST00000549425 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
TMEM116-207ENST00000549425 ATP7BP35670 1465 aa13.11□□□□□ -0.31
TMEM116-207ENST00000549425 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
TMEM116-207ENST00000549425 YBX3P16989 372 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■□□□□ 10.9
TMEM116-207ENST00000549425 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
TMEM116-207ENST00000549425 ADCY9O60503 1353 aa13.1□□□□□ -0.31
TMEM116-207ENST00000549425 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
TMEM116-207ENST00000549425 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
TMEM116-207ENST00000549425 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
TMEM116-207ENST00000549425 POLD1P28340 1107 aa13.09□□□□□ -0.31
TMEM116-207ENST00000549425 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
TMEM116-207ENST00000549425 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
TMEM116-207ENST00000549425 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
TMEM116-207ENST00000549425 TMEM132EQ6IEE7 984 aa13.08□□□□□ -0.32
TMEM116-207ENST00000549425 PCNTO95613 3336 aa13.08□□□□□ -0.32
TMEM116-207ENST00000549425 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
TMEM116-207ENST00000549425 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
TMEM116-207ENST00000549425 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
TMEM116-207ENST00000549425 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
TMEM116-207ENST00000549425 KIF3CO14782 793 aa13.06□□□□□ -0.32
TMEM116-207ENST00000549425 APLP2Q06481 763 aa13.06□□□□□ -0.32
TMEM116-207ENST00000549425 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
TMEM116-207ENST00000549425 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM116-207ENST00000549425 DDB1Q16531 1140 aa13.05□□□□□ -0.32
TMEM116-207ENST00000549425 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
TMEM116-207ENST00000549425 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
TMEM116-207ENST00000549425 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
TMEM116-207ENST00000549425 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
TMEM116-207ENST00000549425 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
TMEM116-207ENST00000549425 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
TMEM116-207ENST00000549425 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms