RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SHPRHQ149N8 1683 aa14.41□□□□□ -0.1
LINC00661-204ENST00000549354 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
LINC00661-204ENST00000549354 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
LINC00661-204ENST00000549354 TXNDC2Q86VQ3 553 aa14.4□□□□□ -0.1
LINC00661-204ENST00000549354 CEP170BQ9Y4F5 1589 aaPredicted RBP14.4□□□□□ -0.1
LINC00661-204ENST00000549354 ZNF142P52746 1687 aaPredicted RBP14.4□□□□□ -0.1
LINC00661-204ENST00000549354 RIMS1Q86UR5 1692 aaKnown RBP14.4□□□□□ -0.1
LINC00661-204ENST00000549354 WASLO00401 505 aaPredicted RBP14.4□□□□□ -0.11
LINC00661-204ENST00000549354 BRPF3Q9ULD4 1205 aa14.4□□□□□ -0.11
LINC00661-204ENST00000549354 TBX22Q9Y458 520 aa14.4□□□□□ -0.11
LINC00661-204ENST00000549354 EID1Q9Y6B2 187 aa14.4□□□□□ -0.11
LINC00661-204ENST00000549354 CPSF1Q10570 1443 aaKnown RBP14.39□□□□□ -0.11
LINC00661-204ENST00000549354 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
LINC00661-204ENST00000549354 PTPRUQ92729 1446 aa14.38□□□□□ -0.11
LINC00661-204ENST00000549354 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
LINC00661-204ENST00000549354 ZNF521Q96K83 1311 aa14.38□□□□□ -0.11
LINC00661-204ENST00000549354 KIF20BQ96Q89 1820 aa14.37□□□□□ -0.11
LINC00661-204ENST00000549354 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.37□□□□□ -0.11
LINC00661-204ENST00000549354 SLKQ9H2G2 1235 aaPredicted RBP14.37□□□□□ -0.11
LINC00661-204ENST00000549354 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
LINC00661-204ENST00000549354 NGEFQ8N5V2 710 aa14.37□□□□□ -0.11
LINC00661-204ENST00000549354 CDC42BPGQ6DT37 1551 aa14.37□□□□□ -0.11
LINC00661-204ENST00000549354 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
LINC00661-204ENST00000549354 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
LINC00661-204ENST00000549354 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
LINC00661-204ENST00000549354 FYB1O15117 783 aa14.36□□□□□ -0.11
LINC00661-204ENST00000549354 PANK1Q8TE04 598 aa14.36□□□□□ -0.11
LINC00661-204ENST00000549354 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
LINC00661-204ENST00000549354 XRN1Q8IZH2 1706 aaKnown RBP14.36□□□□□ -0.11
LINC00661-204ENST00000549354 TOPAZ1Q8N9V7 1692 aa14.35□□□□□ -0.11
LINC00661-204ENST00000549354 EIF5BO60841 1220 aaKnown RBP14.35□□□□□ -0.11
LINC00661-204ENST00000549354 MON2Q7Z3U7 1717 aa14.34□□□□□ -0.11
LINC00661-204ENST00000549354 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
LINC00661-204ENST00000549354 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
LINC00661-204ENST00000549354 PPM1GO15355 546 aaPredicted RBP14.34□□□□□ -0.11
LINC00661-204ENST00000549354 NFKBIBQ15653 356 aa14.34□□□□□ -0.11
LINC00661-204ENST00000549354 TNNQ9UQP3 1299 aa14.33□□□□□ -0.11
LINC00661-204ENST00000549354 EDC4Q6P2E9 1401 aaKnown RBP14.33□□□□□ -0.12
LINC00661-204ENST00000549354 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.12
LINC00661-204ENST00000549354 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
LINC00661-204ENST00000549354 COL3A1P02461 1466 aaPredicted RBP14.33□□□□□ -0.12
LINC00661-204ENST00000549354 MTHFSP49914 203 aa14.33□□□□□ -0.12
LINC00661-204ENST00000549354 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
LINC00661-204ENST00000549354 MS4A1P11836 297 aa14.32□□□□□ -0.12
LINC00661-204ENST00000549354 NUDT16Q96DE0 195 aaKnown RBP14.32□□□□□ -0.12
LINC00661-204ENST00000549354 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
LINC00661-204ENST00000549354 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
LINC00661-204ENST00000549354 SETD1BQ9UPS6 1966 aaKnown RBP14.31□□□□□ -0.12
LINC00661-204ENST00000549354 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
LINC00661-204ENST00000549354 TRMT2AQ8IZ69 625 aaKnown RBP14.3□□□□□ -0.12
LINC00661-204ENST00000549354 CFAP53Q96M91 514 aa14.3□□□□□ -0.12
LINC00661-204ENST00000549354 IQSEC2Q5JU85 1478 aa14.3□□□□□ -0.12
LINC00661-204ENST00000549354 PRR36Q9H6K5 1346 aa14.3□□□□□ -0.12
LINC00661-204ENST00000549354 FRAT2O75474 233 aaPredicted RBP14.3□□□□□ -0.12
LINC00661-204ENST00000549354 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
LINC00661-204ENST00000549354 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
LINC00661-204ENST00000549354 AMOTL2Q9Y2J4 779 aa14.29□□□□□ -0.12
LINC00661-204ENST00000549354 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
LINC00661-204ENST00000549354 NRKQ7Z2Y5 1582 aa14.29□□□□□ -0.12
LINC00661-204ENST00000549354 PLEKHG3A1L390 1219 aa14.28□□□□□ -0.12
LINC00661-204ENST00000549354 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
LINC00661-204ENST00000549354 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
LINC00661-204ENST00000549354 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
LINC00661-204ENST00000549354 DDRGK1Q96HY6 314 aa14.28□□□□□ -0.12
LINC00661-204ENST00000549354 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.12
LINC00661-204ENST00000549354 FBLN1P23142 703 aa14.27□□□□□ -0.13
LINC00661-204ENST00000549354 GSE1Q14687 1217 aa14.27□□□□□ -0.13
LINC00661-204ENST00000549354 RUNDC1Q96C34 613 aa14.26□□□□□ -0.13
LINC00661-204ENST00000549354 AATKQ6ZMQ8 1374 aa14.26□□□□□ -0.13
LINC00661-204ENST00000549354 CHD2O14647 1828 aaKnown RBP14.26□□□□□ -0.13
LINC00661-204ENST00000549354 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
LINC00661-204ENST00000549354 GZF1Q9H116 711 aaPredicted RBP14.25□□□□□ -0.13
LINC00661-204ENST00000549354 SSH2Q76I76 1423 aa14.25□□□□□ -0.13
LINC00661-204ENST00000549354 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
LINC00661-204ENST00000549354 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
LINC00661-204ENST00000549354 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
LINC00661-204ENST00000549354 C8orf34Q49A92 452 aa14.24□□□□□ -0.13
LINC00661-204ENST00000549354 CENPQQ7L2Z9 268 aaPredicted RBP14.23□□□□□ -0.13
LINC00661-204ENST00000549354 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
LINC00661-204ENST00000549354 NKTRP30414 1462 aaKnown RBP14.23□□□□□ -0.13
LINC00661-204ENST00000549354 ANKARQ7Z5J8 1434 aa14.23□□□□□ -0.13
LINC00661-204ENST00000549354 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
LINC00661-204ENST00000549354 IGHDP01880 384 aa14.23□□□□□ -0.13
LINC00661-204ENST00000549354 SEC24BO95487 1268 aa14.23□□□□□ -0.13
LINC00661-204ENST00000549354 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
LINC00661-204ENST00000549354 ELL2O00472 640 aaPredicted RBP14.22□□□□□ -0.13
LINC00661-204ENST00000549354 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.21□□□□□ -0.13
LINC00661-204ENST00000549354 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
LINC00661-204ENST00000549354 U2AF1L5P0DN76 240 aaPredicted RBP14.21□□□□□ -0.13
LINC00661-204ENST00000549354 USP6P35125 1406 aa14.21□□□□□ -0.13
LINC00661-204ENST00000549354 U2AF1Q01081 240 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC00661-204ENST00000549354 PLEKHF1Q96S99 279 aa14.21□□□□□ -0.13
LINC00661-204ENST00000549354 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.13
LINC00661-204ENST00000549354 E9PSI1 815 aa14.21□□□□□ -0.14
LINC00661-204ENST00000549354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.14
LINC00661-204ENST00000549354 WWC1Q8IX03 1113 aa14.21□□□□□ -0.14
LINC00661-204ENST00000549354 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.14
LINC00661-204ENST00000549354 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.14
LINC00661-204ENST00000549354 MAP2P11137 1827 aaKnown RBP14.2□□□□□ -0.14
LINC00661-204ENST00000549354 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms