RNA–Protein interactions for RNA: ENST00000549344.5

PPFIA2-215, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2

Gene PPFIA2, Length 383 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-215ENST00000549344 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
PPFIA2-215ENST00000549344 MPNDQ8N594 471 aa9.64□□□□□ -0.87
PPFIA2-215ENST00000549344 LILRB3O75022 631 aa9.63□□□□□ -0.87
PPFIA2-215ENST00000549344 QPCTQ16769 361 aa9.63□□□□□ -0.87
PPFIA2-215ENST00000549344 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
PPFIA2-215ENST00000549344 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
PPFIA2-215ENST00000549344 WASF2Q9Y6W5 498 aa9.63□□□□□ -0.87
PPFIA2-215ENST00000549344 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
PPFIA2-215ENST00000549344 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 MAP10Q9P2G4 905 aa9.61□□□□□ -0.87
PPFIA2-215ENST00000549344 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
PPFIA2-215ENST00000549344 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
PPFIA2-215ENST00000549344 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
PPFIA2-215ENST00000549344 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
PPFIA2-215ENST00000549344 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
PPFIA2-215ENST00000549344 FAM174AQ8TBP5 190 aa9.59□□□□□ -0.87
PPFIA2-215ENST00000549344 BCANQ96GW7 911 aa9.59□□□□□ -0.87
PPFIA2-215ENST00000549344 HELBQ8NG08 1087 aaPredicted RBP9.58□□□□□ -0.88
PPFIA2-215ENST00000549344 CAPN5O15484 640 aaPredicted RBP9.57□□□□□ -0.88
PPFIA2-215ENST00000549344 SNRPBP14678 240 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-215ENST00000549344 TSC1Q92574 1164 aa9.57□□□□□ -0.88
PPFIA2-215ENST00000549344 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-215ENST00000549344 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
PPFIA2-215ENST00000549344 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
PPFIA2-215ENST00000549344 CDK15Q96Q40 435 aa9.55□□□□□ -0.88
PPFIA2-215ENST00000549344 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
PPFIA2-215ENST00000549344 NNTQ13423 1086 aa9.54□□□□□ -0.88
PPFIA2-215ENST00000549344 TRIM46Q7Z4K8 759 aa9.54□□□□□ -0.88
PPFIA2-215ENST00000549344 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-215ENST00000549344 WFS1O76024 890 aa9.53□□□□□ -0.88
PPFIA2-215ENST00000549344 C4orf48Q5BLP8 95 aa9.53□□□□□ -0.88
PPFIA2-215ENST00000549344 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
PPFIA2-215ENST00000549344 ADH1CP00326 375 aa9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 BMP1P13497 986 aa9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 NFX1Q12986 1120 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 SH3D19Q5HYK7 790 aa9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
PPFIA2-215ENST00000549344 AGERQ15109 404 aa9.51□□□□□ -0.89
PPFIA2-215ENST00000549344 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
PPFIA2-215ENST00000549344 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
PPFIA2-215ENST00000549344 TIMP2P16035 220 aa9.5□□□□□ -0.89
PPFIA2-215ENST00000549344 NR5A1Q13285 461 aa9.5□□□□□ -0.89
PPFIA2-215ENST00000549344 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
PPFIA2-215ENST00000549344 C1QTNF2Q9BXJ5 285 aa9.5□□□□□ -0.89
PPFIA2-215ENST00000549344 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
PPFIA2-215ENST00000549344 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
PPFIA2-215ENST00000549344 GPKOWQ92917 476 aaPredicted RBP eCLIP9.49□□□□□ -0.89
PPFIA2-215ENST00000549344 KLF16Q9BXK1 252 aaPredicted RBP9.49□□□□□ -0.89
PPFIA2-215ENST00000549344 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
PPFIA2-215ENST00000549344 TERTO14746 1132 aaKnown RBP9.48□□□□□ -0.89
PPFIA2-215ENST00000549344 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
PPFIA2-215ENST00000549344 PPP2R2DQ66LE6 453 aa9.48□□□□□ -0.89
PPFIA2-215ENST00000549344 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
PPFIA2-215ENST00000549344 GRM5P41594 1212 aa9.47□□□□□ -0.89
PPFIA2-215ENST00000549344 CTDSPL2Q05D32 466 aa9.47□□□□□ -0.89
PPFIA2-215ENST00000549344 TRMT44Q8IYL2 757 aaKnown RBP9.47□□□□□ -0.89
PPFIA2-215ENST00000549344 MAP4K5Q9Y4K4 846 aa9.46□□□□□ -0.9
PPFIA2-215ENST00000549344 FBXO31Q5XUX0 539 aaPredicted RBP9.45□□□□□ -0.9
PPFIA2-215ENST00000549344 MRPL14Q6P1L8 145 aaKnown RBP9.45□□□□□ -0.9
PPFIA2-215ENST00000549344 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
PPFIA2-215ENST00000549344 ZFP42Q96MM3 310 aa9.45□□□□□ -0.9
PPFIA2-215ENST00000549344 WIPF1O43516 503 aa9.44□□□□□ -0.9
PPFIA2-215ENST00000549344 NR3C2P08235 984 aa9.44□□□□□ -0.9
PPFIA2-215ENST00000549344 SCARF1Q14162 830 aa9.44□□□□□ -0.9
PPFIA2-215ENST00000549344 ZIC2O95409 532 aaPredicted RBP9.43□□□□□ -0.9
PPFIA2-215ENST00000549344 PDXDC2PQ6P474 469 aa9.43□□□□□ -0.9
PPFIA2-215ENST00000549344 NPAS3Q8IXF0 933 aa9.43□□□□□ -0.9
PPFIA2-215ENST00000549344 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
PPFIA2-215ENST00000549344 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-215ENST00000549344 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
PPFIA2-215ENST00000549344 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
PPFIA2-215ENST00000549344 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
PPFIA2-215ENST00000549344 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
PPFIA2-215ENST00000549344 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
PPFIA2-215ENST00000549344 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
PPFIA2-215ENST00000549344 FSHRP23945 695 aa9.4□□□□□ -0.9
PPFIA2-215ENST00000549344 ERFEQ4G0M1 354 aa9.4□□□□□ -0.9
PPFIA2-215ENST00000549344 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
PPFIA2-215ENST00000549344 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
PPFIA2-215ENST00000549344 PURBQ96QR8 312 aaKnown RBP9.4□□□□□ -0.9
PPFIA2-215ENST00000549344 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
PPFIA2-215ENST00000549344 ATP1B4Q9UN42 357 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-215ENST00000549344 NR6A1Q15406 480 aa9.38□□□□□ -0.91
PPFIA2-215ENST00000549344 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
PPFIA2-215ENST00000549344 AP1G2O75843 785 aa9.37□□□□□ -0.91
PPFIA2-215ENST00000549344 INSM1Q01101 510 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-215ENST00000549344 CCDC116Q8IYX3 515 aa9.37□□□□□ -0.91
PPFIA2-215ENST00000549344 MEIOBQ8N635 442 aa9.37□□□□□ -0.91
PPFIA2-215ENST00000549344 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
PPFIA2-215ENST00000549344 EMILIN1Q9Y6C2 1016 aa9.37□□□□□ -0.91
PPFIA2-215ENST00000549344 CDV3Q9UKY7 258 aaKnown RBP9.36□□□□□ -0.91
PPFIA2-215ENST00000549344 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
PPFIA2-215ENST00000549344 H3BM21 787 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms