RNA–Protein interactions for RNA: ENST00000548696.6

PRICKLE1-205, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRICKLE1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-205ENST00000548696 SOX12O15370 315 aa13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 SYNMO15061 1565 aa13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 PRPF40AO75400 957 aaKnown RBP13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 NUCB1Q02818 461 aa13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
PRICKLE1-205ENST00000548696 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
PRICKLE1-205ENST00000548696 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRICKLE1-205ENST00000548696 PTPRTO14522 1441 aa13.52□□□□□ -0.25
PRICKLE1-205ENST00000548696 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.25
PRICKLE1-205ENST00000548696 NPC1L1Q9UHC9 1359 aa13.52□□□□□ -0.25
PRICKLE1-205ENST00000548696 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
PRICKLE1-205ENST00000548696 MADDQ8WXG6 1647 aa13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 KIF2CQ99661 725 aa13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 MLECQ14165 292 aa13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
PRICKLE1-205ENST00000548696 RRP9O43818 475 aaKnown RBP13.5□□□□□ -0.25
PRICKLE1-205ENST00000548696 DIAPH1O60610 1272 aaKnown RBP13.5□□□□□ -0.25
PRICKLE1-205ENST00000548696 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
PRICKLE1-205ENST00000548696 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
PRICKLE1-205ENST00000548696 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
PRICKLE1-205ENST00000548696 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
PRICKLE1-205ENST00000548696 PREX2Q70Z35 1606 aa13.49□□□□□ -0.25
PRICKLE1-205ENST00000548696 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
PRICKLE1-205ENST00000548696 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
PRICKLE1-205ENST00000548696 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
PRICKLE1-205ENST00000548696 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
PRICKLE1-205ENST00000548696 CLTCL1P53675 1640 aa13.48□□□□□ -0.25
PRICKLE1-205ENST00000548696 IQGAP3Q86VI3 1631 aa13.48□□□□□ -0.25
PRICKLE1-205ENST00000548696 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 AAMPQ13685 434 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 SIRT2Q8IXJ6 389 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 UNC13BO14795 1591 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 ERCC6L2Q5T890 1561 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 MYOM1P52179 1685 aa13.47□□□□□ -0.25
PRICKLE1-205ENST00000548696 SYCE3A1L190 88 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 NUTM2FA1L443 756 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 FYB1O15117 783 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 PTMAP06454 111 aaKnown RBP13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 PRDM10Q9NQV6 1147 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 CD109Q6YHK3 1445 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
PRICKLE1-205ENST00000548696 DNTTIP2Q5QJE6 756 aaKnown RBP13.46□□□□□ -0.26
PRICKLE1-205ENST00000548696 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 SLC4A10Q6U841 1118 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 ZSCAN30Q86W11 494 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 TSC1Q92574 1164 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 SNX21Q969T3 373 aa13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
PRICKLE1-205ENST00000548696 PLCH2O75038 1416 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 CCDC173Q0VFZ6 552 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 C14orf93Q9H972 538 aaKnown RBP13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 LAMC1P11047 1609 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 CDC45O75419 566 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 VIRMAQ69YN4 1812 aaKnown RBP13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 DDIT3P35638 169 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
PRICKLE1-205ENST00000548696 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 TWISTNBQ3B726 338 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 ZNF830Q96NB3 372 aaPredicted RBP13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
PRICKLE1-205ENST00000548696 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
PRICKLE1-205ENST00000548696 CEP152O94986 1710 aa13.42□□□□□ -0.26
PRICKLE1-205ENST00000548696 STAC3Q96MF2 364 aa13.42□□□□□ -0.26
PRICKLE1-205ENST00000548696 VAMP4O75379 141 aa13.41□□□□□ -0.26
PRICKLE1-205ENST00000548696 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
PRICKLE1-205ENST00000548696 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
PRICKLE1-205ENST00000548696 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
PRICKLE1-205ENST00000548696 UQCRHLA0A096LP55 91 aa13.41□□□□□ -0.26
PRICKLE1-205ENST00000548696 UQCRHP07919 91 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms