RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ZBTB3Q9H5J0 574 aa8.94□□□□□ -0.98
DEPDC4-205ENST00000548313 MTMR2Q13614 643 aa8.93□□□□□ -0.98
DEPDC4-205ENST00000548313 PPP2R2DQ66LE6 453 aa8.93□□□□□ -0.98
DEPDC4-205ENST00000548313 USB1Q9BQ65 265 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-205ENST00000548313 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
DEPDC4-205ENST00000548313 HRCP23327 699 aa8.92□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 DXOO77932 396 aaKnown RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 RETREG3Q86VR2 466 aa8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 HPS1Q92902 700 aa8.91□□□□□ -0.98
DEPDC4-205ENST00000548313 WNT7BP56706 349 aa8.9□□□□□ -0.98
DEPDC4-205ENST00000548313 QPCTQ16769 361 aa8.9□□□□□ -0.98
DEPDC4-205ENST00000548313 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-205ENST00000548313 SLC16A10Q8TF71 515 aa8.89□□□□□ -0.99
DEPDC4-205ENST00000548313 FAM181BA6NEQ2 426 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 CABLES1Q8TDN4 633 aa8.88□□□□□ -0.99
DEPDC4-205ENST00000548313 RFC5P40937 340 aa8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 DESI1Q6ICB0 168 aa8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 SYMPKQ92797 1274 aaKnown RBP8.87□□□□□ -0.99
DEPDC4-205ENST00000548313 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
DEPDC4-205ENST00000548313 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
DEPDC4-205ENST00000548313 SKOR1P84550 965 aa8.85□□□□□ -0.99
DEPDC4-205ENST00000548313 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 HELBQ8NG08 1087 aaPredicted RBP8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
DEPDC4-205ENST00000548313 CFAP99D6REC4 459 aa8.83□□□□□ -1
DEPDC4-205ENST00000548313 FBXO31Q5XUX0 539 aaPredicted RBP8.83□□□□□ -1
DEPDC4-205ENST00000548313 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
DEPDC4-205ENST00000548313 NPAS3Q8IXF0 933 aa8.82□□□□□ -1
DEPDC4-205ENST00000548313 JUNDP17535 347 aa8.81□□□□□ -1
DEPDC4-205ENST00000548313 AP1G2O75843 785 aa8.8□□□□□ -1
DEPDC4-205ENST00000548313 LYPD8Q6UX82 237 aa8.8□□□□□ -1
DEPDC4-205ENST00000548313 IRF7Q92985 503 aa8.8□□□□□ -1
DEPDC4-205ENST00000548313 FLIIQ13045 1269 aa8.79□□□□□ -1
DEPDC4-205ENST00000548313 EHBP1Q8NDI1 1231 aa8.79□□□□□ -1
DEPDC4-205ENST00000548313 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
DEPDC4-205ENST00000548313 SOCS7O14512 581 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
DEPDC4-205ENST00000548313 SIAH2O43255 324 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 CTDSPL2Q05D32 466 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 PTPRNQ16849 979 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 TSC1Q92574 1164 aa8.78□□□□□ -1
DEPDC4-205ENST00000548313 GMPRP36959 345 aa8.77□□□□□ -1.01
DEPDC4-205ENST00000548313 ZSCAN1Q8NBB4 408 aa8.77□□□□□ -1.01
DEPDC4-205ENST00000548313 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
DEPDC4-205ENST00000548313 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
DEPDC4-205ENST00000548313 APBB1O00213 710 aa8.75□□□□□ -1.01
DEPDC4-205ENST00000548313 TRIM46Q7Z4K8 759 aa8.75□□□□□ -1.01
DEPDC4-205ENST00000548313 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 BMP1P13497 986 aa8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 PTCRAQ6ISU1 281 aaPredicted RBP8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 EVA1BQ9NVM1 165 aa8.74□□□□□ -1.01
DEPDC4-205ENST00000548313 H3BM21 787 aa8.73□□□□□ -1.01
DEPDC4-205ENST00000548313 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-205ENST00000548313 MCM6Q14566 821 aa8.72□□□□□ -1.01
DEPDC4-205ENST00000548313 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
DEPDC4-205ENST00000548313 SNRKQ9NRH2 765 aa8.72□□□□□ -1.01
DEPDC4-205ENST00000548313 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 SH3BP2P78314 561 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 KCNH2Q12809 1159 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 ERICH6Q7L0X2 663 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.02
DEPDC4-205ENST00000548313 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
DEPDC4-205ENST00000548313 CTHP32929 405 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 VEGFBP49765 207 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 ZFP42Q96MM3 310 aa8.69□□□□□ -1.02
DEPDC4-205ENST00000548313 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
DEPDC4-205ENST00000548313 SCARF1Q14162 830 aa8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 MPNDQ8N594 471 aa8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 UNC93B1Q9H1C4 597 aa8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-205ENST00000548313 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 VARSP26640 1264 aaKnown RBP8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 NR6A1Q15406 480 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
DEPDC4-205ENST00000548313 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 MRPL14Q6P1L8 145 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 NDUFB9Q9Y6M9 179 aa8.65□□□□□ -1.02
DEPDC4-205ENST00000548313 ZC3H4Q9UPT8 1303 aaKnown RBP8.64□□□□□ -1.03
DEPDC4-205ENST00000548313 RAD21O60216 631 aa8.64□□□□□ -1.03
DEPDC4-205ENST00000548313 BAP1Q92560 729 aa8.64□□□□□ -1.03
DEPDC4-205ENST00000548313 NNTQ13423 1086 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 ZNF511Q8NB15 262 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 FKBPLQ9UIM3 349 aa8.63□□□□□ -1.03
DEPDC4-205ENST00000548313 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms