RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 PDE4CQ08493 712 aa11.62□□□□□ -0.55
TMEM116-205ENST00000547878 SF3B2Q13435 895 aaKnown RBP11.62□□□□□ -0.55
TMEM116-205ENST00000547878 ESCO1Q5FWF5 840 aa11.62□□□□□ -0.55
TMEM116-205ENST00000547878 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
TMEM116-205ENST00000547878 LRPPRCP42704 1394 aaKnown RBP11.6□□□□□ -0.55
TMEM116-205ENST00000547878 GPRASP1Q5JY77 1395 aa11.6□□□□□ -0.55
TMEM116-205ENST00000547878 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
TMEM116-205ENST00000547878 BRD4O60885 1362 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-205ENST00000547878 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
TMEM116-205ENST00000547878 CDC42BPGQ6DT37 1551 aa11.59□□□□□ -0.55
TMEM116-205ENST00000547878 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
TMEM116-205ENST00000547878 FGD1P98174 961 aa11.59□□□□□ -0.55
TMEM116-205ENST00000547878 INSRP06213 1382 aa11.58□□□□□ -0.56
TMEM116-205ENST00000547878 KRT27Q7Z3Y8 459 aa11.58□□□□□ -0.56
TMEM116-205ENST00000547878 ONECUT3O60422 494 aaPredicted RBP11.57□□□□□ -0.56
TMEM116-205ENST00000547878 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
TMEM116-205ENST00000547878 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
TMEM116-205ENST00000547878 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
TMEM116-205ENST00000547878 VPS72Q15906 364 aa11.57□□□□□ -0.56
TMEM116-205ENST00000547878 SPATA31A3Q5VYP0 1347 aa11.56□□□□□ -0.56
TMEM116-205ENST00000547878 PLCH1Q4KWH8 1693 aa11.56□□□□□ -0.56
TMEM116-205ENST00000547878 CCDC144AA2RUR9 1427 aa11.56□□□□□ -0.56
TMEM116-205ENST00000547878 BAG6P46379 1132 aa11.56□□□□□ -0.56
TMEM116-205ENST00000547878 EN1Q05925 392 aaPredicted RBP11.56□□□□□ -0.56
TMEM116-205ENST00000547878 CABLES1Q8TDN4 633 aa11.56□□□□□ -0.56
TMEM116-205ENST00000547878 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
TMEM116-205ENST00000547878 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
TMEM116-205ENST00000547878 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
TMEM116-205ENST00000547878 RALBP1Q15311 655 aa11.55□□□□□ -0.56
TMEM116-205ENST00000547878 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
TMEM116-205ENST00000547878 IRX6P78412 446 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-205ENST00000547878 ZMYND15Q9H091 742 aa11.55□□□□□ -0.56
TMEM116-205ENST00000547878 CCDC9Q9Y3X0 531 aaKnown RBP11.55□□□□□ -0.56
TMEM116-205ENST00000547878 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
TMEM116-205ENST00000547878 PARD3Q8TEW0 1356 aa11.54□□□□□ -0.56
TMEM116-205ENST00000547878 YY1P25490 414 aa11.54□□□□□ -0.56
TMEM116-205ENST00000547878 KIF1BO60333 1816 aa11.54□□□□□ -0.56
TMEM116-205ENST00000547878 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
TMEM116-205ENST00000547878 NWD2Q9ULI1 1742 aa11.53□□□□□ -0.56
TMEM116-205ENST00000547878 VGFO15240 615 aaPredicted RBP11.52□□□□□ -0.56
TMEM116-205ENST00000547878 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.56
TMEM116-205ENST00000547878 ABCA3Q99758 1704 aa11.52□□□□□ -0.56
TMEM116-205ENST00000547878 PLEKHH1Q9ULM0 1364 aa11.52□□□□□ -0.57
TMEM116-205ENST00000547878 A0A0G2JS52 829 aa11.52□□□□□ -0.57
TMEM116-205ENST00000547878 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
TMEM116-205ENST00000547878 KRT28Q7Z3Y7 464 aa11.52□□□□□ -0.57
TMEM116-205ENST00000547878 RGPD1P0DJD0 1748 aa11.51□□□□□ -0.57
TMEM116-205ENST00000547878 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
TMEM116-205ENST00000547878 EZH2Q15910 746 aaKnown RBP11.51□□□□□ -0.57
TMEM116-205ENST00000547878 NRAPQ86VF7 1730 aa11.51□□□□□ -0.57
TMEM116-205ENST00000547878 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
TMEM116-205ENST00000547878 ST20-MTHFSA0A0A6YYL1 179 aa11.5□□□□□ -0.57
TMEM116-205ENST00000547878 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
TMEM116-205ENST00000547878 HAP1P54257 671 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-205ENST00000547878 AAMPQ13685 434 aa11.5□□□□□ -0.57
TMEM116-205ENST00000547878 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
TMEM116-205ENST00000547878 PPLO60437 1756 aa11.5□□□□□ -0.57
TMEM116-205ENST00000547878 TMC1Q8TDI8 760 aa11.49□□□□□ -0.57
TMEM116-205ENST00000547878 STK26Q9P289 416 aa11.49□□□□□ -0.57
TMEM116-205ENST00000547878 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
TMEM116-205ENST00000547878 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
TMEM116-205ENST00000547878 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
TMEM116-205ENST00000547878 DISP2A7MBM2 1401 aa11.48□□□□□ -0.57
TMEM116-205ENST00000547878 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
TMEM116-205ENST00000547878 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
TMEM116-205ENST00000547878 HOMEZQ8IX15 550 aa11.48□□□□□ -0.57
TMEM116-205ENST00000547878 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
TMEM116-205ENST00000547878 RGPD8O14715 1765 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-205ENST00000547878 TECPR2O15040 1411 aa11.47□□□□□ -0.57
TMEM116-205ENST00000547878 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
TMEM116-205ENST00000547878 CAMKK2Q96RR4 588 aa11.46□□□□□ -0.57
TMEM116-205ENST00000547878 PDE3BQ13370 1112 aa11.46□□□□□ -0.58
TMEM116-205ENST00000547878 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.58
TMEM116-205ENST00000547878 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.58
TMEM116-205ENST00000547878 BTG4Q9NY30 223 aa11.46□□□□□ -0.58
TMEM116-205ENST00000547878 THSD7AQ9UPZ6 1657 aa11.46□□□□□ -0.58
TMEM116-205ENST00000547878 RPGRIP1LQ68CZ1 1315 aa11.45□□□□□ -0.58
TMEM116-205ENST00000547878 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
TMEM116-205ENST00000547878 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
TMEM116-205ENST00000547878 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-205ENST00000547878 KNDC1Q76NI1 1749 aa11.44□□□□□ -0.58
TMEM116-205ENST00000547878 SBNO1A3KN83 1393 aa11.44□□□□□ -0.58
TMEM116-205ENST00000547878 TRIM37O94972 964 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 PPP4R3CPQ6ZMV5 832 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 TESK2Q96S53 571 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 ABCC11Q96J66 1382 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 NRXN1Q9ULB1 1477 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 SPATA31A5Q5VU36 1347 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 SPATA31A7Q8IWB4 1347 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 KIAA1210Q9ULL0 1709 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 POLR3GLQ9BT43 218 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
TMEM116-205ENST00000547878 RREB1Q92766 1687 aa11.42□□□□□ -0.58
TMEM116-205ENST00000547878 PSME1Q06323 249 aa11.42□□□□□ -0.58
TMEM116-205ENST00000547878 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
TMEM116-205ENST00000547878 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
TMEM116-205ENST00000547878 ARHGEF10O15013 1369 aa11.42□□□□□ -0.58
TMEM116-205ENST00000547878 NUP188Q5SRE5 1749 aa11.42□□□□□ -0.58
TMEM116-205ENST00000547878 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms