RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PHRF1Q9P1Y6 1649 aaKnown RBP29.67■■■□□ 2.34
SSH1-207ENST00000547862 FAM83GA6ND36 823 aa29.66■■■□□ 2.34
SSH1-207ENST00000547862 STAC3Q96MF2 364 aa29.66■■■□□ 2.34
SSH1-207ENST00000547862 BLMP54132 1417 aaPredicted RBP29.64■■■□□ 2.34
SSH1-207ENST00000547862 BTG4Q9NY30 223 aa29.63■■■□□ 2.33
SSH1-207ENST00000547862 CCDC125Q86Z20 511 aa29.62■■■□□ 2.33
SSH1-207ENST00000547862 ZRANB1Q9UGI0 708 aa29.62■■■□□ 2.33
SSH1-207ENST00000547862 NUDT16Q96DE0 195 aaKnown RBP29.6■■■□□ 2.33
SSH1-207ENST00000547862 FAM98CQ17RN3 349 aaKnown RBP29.58■■■□□ 2.33
SSH1-207ENST00000547862 QRICH2Q9H0J4 1663 aa29.57■■■□□ 2.32
SSH1-207ENST00000547862 KRT27Q7Z3Y8 459 aa29.57■■■□□ 2.32
SSH1-207ENST00000547862 DEFB132Q7Z7B7 95 aa29.57■■■□□ 2.32
SSH1-207ENST00000547862 CDK19Q9BWU1 502 aa29.57■■■□□ 2.32
SSH1-207ENST00000547862 SF3B2Q13435 895 aaKnown RBP29.56■■■□□ 2.32
SSH1-207ENST00000547862 NUTM2GQ5VZR2 741 aa29.55■■■□□ 2.32
SSH1-207ENST00000547862 PRDM11Q9NQV5 511 aa29.55■■■□□ 2.32
SSH1-207ENST00000547862 NBPF1Q3BBV0 1214 aa29.52■■■□□ 2.32
SSH1-207ENST00000547862 THSD7AQ9UPZ6 1657 aa29.51■■■□□ 2.31
SSH1-207ENST00000547862 NRKQ7Z2Y5 1582 aa29.51■■■□□ 2.31
SSH1-207ENST00000547862 KIAA0232Q92628 1395 aa29.51■■■□□ 2.31
SSH1-207ENST00000547862 CHRNA2Q15822 529 aa29.5■■■□□ 2.31
SSH1-207ENST00000547862 RGPD1P0DJD0 1748 aa29.5■■■□□ 2.31
SSH1-207ENST00000547862 ACEP12821 1306 aa29.49■■■□□ 2.31
SSH1-207ENST00000547862 ONECUT3O60422 494 aaPredicted RBP29.49■■■□□ 2.31
SSH1-207ENST00000547862 SRCAPQ6ZRS2 3230 aa29.48■■■□□ 2.31
SSH1-207ENST00000547862 POLR3AO14802 1390 aaPredicted RBP29.47■■■□□ 2.31
SSH1-207ENST00000547862 SPATA31A5Q5VU36 1347 aa29.46■■■□□ 2.31
SSH1-207ENST00000547862 SPATA31A7Q8IWB4 1347 aa29.46■■■□□ 2.31
SSH1-207ENST00000547862 ZC3H6P61129 1189 aaKnown RBP29.46■■■□□ 2.31
SSH1-207ENST00000547862 FAM182BQ5T319 152 aa29.46■■■□□ 2.31
SSH1-207ENST00000547862 STRN4Q9NRL3 753 aa29.46■■■□□ 2.31
SSH1-207ENST00000547862 SRPK2P78362 688 aaKnown RBP29.45■■■□□ 2.31
SSH1-207ENST00000547862 CCDC61Q9Y6R9 512 aa29.44■■■□□ 2.3
SSH1-207ENST00000547862 PPIP5K1Q6PFW1 1433 aa29.44■■■□□ 2.3
SSH1-207ENST00000547862 CENPJQ9HC77 1338 aaPredicted RBP29.44■■■□□ 2.3
SSH1-207ENST00000547862 TNS1Q9HBL0 1735 aaKnown RBP29.43■■■□□ 2.3
SSH1-207ENST00000547862 TRPM1Q7Z4N2 1603 aa29.42■■■□□ 2.3
SSH1-207ENST00000547862 NBPF8Q3BBV2 869 aa29.42■■■□□ 2.3
SSH1-207ENST00000547862 CABP2Q9NPB3 220 aa29.4■■■□□ 2.3
SSH1-207ENST00000547862 BAG6P46379 1132 aa29.39■■■□□ 2.3
SSH1-207ENST00000547862 ABTB2Q8N961 1025 aa29.39■■■□□ 2.3
SSH1-207ENST00000547862 SPATA31A1Q5TZJ5 1347 aa29.38■■■□□ 2.29
SSH1-207ENST00000547862 LMO7Q8WWI1 1683 aa29.37■■■□□ 2.29
SSH1-207ENST00000547862 PLEKHG3A1L390 1219 aa29.37■■■□□ 2.29
SSH1-207ENST00000547862 USP35Q9P2H5 1018 aa29.37■■■□□ 2.29
SSH1-207ENST00000547862 SSH2Q76I76 1423 aa29.35■■■□□ 2.29
SSH1-207ENST00000547862 L3MBTL2Q969R5 705 aa29.34■■■□□ 2.29
SSH1-207ENST00000547862 CAMTA1Q9Y6Y1 1673 aa29.34■■■□□ 2.29
SSH1-207ENST00000547862 ZBTB7CA1YPR0 619 aa29.33■■■□□ 2.29
SSH1-207ENST00000547862 EVA1CP58658 441 aa29.33■■■□□ 2.29
SSH1-207ENST00000547862 PSDA5PKW4 1024 aaPredicted RBP29.32■■■□□ 2.28
SSH1-207ENST00000547862 SIN3AQ96ST3 1273 aa29.32■■■□□ 2.28
SSH1-207ENST00000547862 USP19O94966 1318 aa29.31■■■□□ 2.28
SSH1-207ENST00000547862 EN1Q05925 392 aaPredicted RBP29.31■■■□□ 2.28
SSH1-207ENST00000547862 NEUROD1Q13562 356 aa29.3■■■□□ 2.28
SSH1-207ENST00000547862 LRP5O75197 1615 aa29.3■■■□□ 2.28
SSH1-207ENST00000547862 PIK3C2AO00443 1686 aa29.29■■■□□ 2.28
SSH1-207ENST00000547862 USP6P35125 1406 aa29.28■■■□□ 2.28
SSH1-207ENST00000547862 CPDO75976 1380 aa29.27■■■□□ 2.28
SSH1-207ENST00000547862 LARP1Q6PKG0 1096 aaKnown RBP29.27■■■□□ 2.28
SSH1-207ENST00000547862 NLRP13Q86W25 1043 aa29.27■■■□□ 2.28
SSH1-207ENST00000547862 ROCK2O75116 1388 aaKnown RBP29.26■■■□□ 2.28
SSH1-207ENST00000547862 AKAP12Q02952 1782 aa29.26■■■□□ 2.28
SSH1-207ENST00000547862 CABP1Q9NZU7 370 aa29.26■■■□□ 2.27
SSH1-207ENST00000547862 COL5A2P05997 1499 aaPredicted RBP29.23■■■□□ 2.27
SSH1-207ENST00000547862 TRIM37O94972 964 aa29.23■■■□□ 2.27
SSH1-207ENST00000547862 GCP02774 474 aa29.23■■■□□ 2.27
SSH1-207ENST00000547862 SLIT3O75094 1523 aa29.23■■■□□ 2.27
SSH1-207ENST00000547862 PARP4Q9UKK3 1724 aaKnown RBP29.23■■■□□ 2.27
SSH1-207ENST00000547862 EVC2Q86UK5 1308 aa29.22■■■□□ 2.27
SSH1-207ENST00000547862 DISP2A7MBM2 1401 aa29.21■■■□□ 2.27
SSH1-207ENST00000547862 WNK3Q9BYP7 1800 aa29.2■■■□□ 2.27
SSH1-207ENST00000547862 NLRP6P59044 892 aa29.2■■■□□ 2.26
SSH1-207ENST00000547862 PDE3BQ13370 1112 aa29.2■■■□□ 2.26
SSH1-207ENST00000547862 TCP11L2Q8N4U5 519 aa29.2■■■□□ 2.26
SSH1-207ENST00000547862 BRD4O60885 1362 aaPredicted RBP29.19■■■□□ 2.26
SSH1-207ENST00000547862 EZH2Q15910 746 aaKnown RBP29.19■■■□□ 2.26
SSH1-207ENST00000547862 FAM196AQ6ZSG2 479 aa29.19■■■□□ 2.26
SSH1-207ENST00000547862 BARGINQ6ZT62 677 aa29.19■■■□□ 2.26
SSH1-207ENST00000547862 RGPD5Q99666 1765 aa29.18■■■□□ 2.26
SSH1-207ENST00000547862 RREB1Q92766 1687 aa29.18■■■□□ 2.26
SSH1-207ENST00000547862 LRRC37A3O60309 1634 aa29.17■■■□□ 2.26
SSH1-207ENST00000547862 R3HDM1Q15032 1099 aaKnown RBP29.16■■■□□ 2.26
SSH1-207ENST00000547862 NUP188Q5SRE5 1749 aa29.16■■■□□ 2.26
SSH1-207ENST00000547862 CRB1P82279 1406 aa29.15■■■□□ 2.26
SSH1-207ENST00000547862 COL18A1P39060 1754 aa29.15■■■□□ 2.26
SSH1-207ENST00000547862 SOX12O15370 315 aa29.14■■■□□ 2.26
SSH1-207ENST00000547862 APBA3O96018 575 aa29.14■■■□□ 2.26
SSH1-207ENST00000547862 MON2Q7Z3U7 1717 aa29.14■■■□□ 2.25
SSH1-207ENST00000547862 THRAP3Q9Y2W1 955 aaKnown RBP29.1■■■□□ 2.25
SSH1-207ENST00000547862 AATKQ6ZMQ8 1374 aa29.1■■■□□ 2.25
SSH1-207ENST00000547862 CPSF1Q10570 1443 aaKnown RBP29.1■■■□□ 2.25
SSH1-207ENST00000547862 CAMKK2Q96RR4 588 aa29.08■■■□□ 2.25
SSH1-207ENST00000547862 TTC21BQ7Z4L5 1316 aa29.08■■■□□ 2.25
SSH1-207ENST00000547862 PEAK1Q9H792 1746 aa29.08■■■□□ 2.25
SSH1-207ENST00000547862 SBF2Q86WG5 1849 aa29.08■■■□□ 2.25
SSH1-207ENST00000547862 TOM1L2Q6ZVM7 507 aa29.07■■■□□ 2.24
SSH1-207ENST00000547862 KTN1Q86UP2 1357 aaKnown RBP29.05■■■□□ 2.24
SSH1-207ENST00000547862 OVOS2A0A0G2JMS6 1433 aa29.04■■■□□ 2.24
SSH1-207ENST00000547862 OVOS2A0A0J9YW53 1432 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms