RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
CCDC65-203ENST00000547861 COL16A1Q07092 1604 aaPredicted RBP11.01□□□□□ -0.65
CCDC65-203ENST00000547861 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
CCDC65-203ENST00000547861 NRXN3Q9Y4C0 1643 aa11.01□□□□□ -0.65
CCDC65-203ENST00000547861 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
CCDC65-203ENST00000547861 RALBP1Q15311 655 aa11□□□□□ -0.65
CCDC65-203ENST00000547861 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
CCDC65-203ENST00000547861 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
CCDC65-203ENST00000547861 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
CCDC65-203ENST00000547861 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
CCDC65-203ENST00000547861 KNDC1Q76NI1 1749 aa10.99□□□□□ -0.65
CCDC65-203ENST00000547861 PANK3Q9H999 370 aa10.98□□□□□ -0.65
CCDC65-203ENST00000547861 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
CCDC65-203ENST00000547861 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
CCDC65-203ENST00000547861 BRINP3Q76B58 766 aa10.98□□□□□ -0.65
CCDC65-203ENST00000547861 XRN1Q8IZH2 1706 aaKnown RBP10.98□□□□□ -0.65
CCDC65-203ENST00000547861 CENPJQ9HC77 1338 aaPredicted RBP10.97□□□□□ -0.65
CCDC65-203ENST00000547861 METP08581 1390 aa10.97□□□□□ -0.65
CCDC65-203ENST00000547861 LRPPRCP42704 1394 aaKnown RBP10.97□□□□□ -0.65
CCDC65-203ENST00000547861 AHDC1Q5TGY3 1603 aaPredicted RBP10.97□□□□□ -0.65
CCDC65-203ENST00000547861 ANKRD26Q9UPS8 1709 aa10.97□□□□□ -0.65
CCDC65-203ENST00000547861 MEX3CQ5U5Q3 659 aaKnown RBP10.97□□□□□ -0.65
CCDC65-203ENST00000547861 SPATA31A6Q5VVP1 1343 aa10.97□□□□□ -0.65
CCDC65-203ENST00000547861 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
CCDC65-203ENST00000547861 LRP6O75581 1613 aa10.97□□□□□ -0.65
CCDC65-203ENST00000547861 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
CCDC65-203ENST00000547861 SUPT16HQ9Y5B9 1047 aaKnown RBP10.95□□□□□ -0.66
CCDC65-203ENST00000547861 DCCP43146 1447 aa10.95□□□□□ -0.66
CCDC65-203ENST00000547861 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
CCDC65-203ENST00000547861 KIF20BQ96Q89 1820 aa10.94□□□□□ -0.66
CCDC65-203ENST00000547861 NUTM2BA6NNL0 878 aaPredicted RBP10.94□□□□□ -0.66
CCDC65-203ENST00000547861 NUTM2EB1AL46 878 aaPredicted RBP10.94□□□□□ -0.66
CCDC65-203ENST00000547861 TMEM132EQ6IEE7 984 aa10.94□□□□□ -0.66
CCDC65-203ENST00000547861 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
CCDC65-203ENST00000547861 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
CCDC65-203ENST00000547861 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
CCDC65-203ENST00000547861 TRAK1Q9UPV9 953 aa10.94□□□□□ -0.66
CCDC65-203ENST00000547861 MST1RQ04912 1400 aa10.94□□□□□ -0.66
CCDC65-203ENST00000547861 CC2D1BQ5T0F9 858 aaKnown RBP10.93□□□□□ -0.66
CCDC65-203ENST00000547861 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
CCDC65-203ENST00000547861 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
CCDC65-203ENST00000547861 ADGRL3Q9HAR2 1447 aa10.93□□□□□ -0.66
CCDC65-203ENST00000547861 NPC1L1Q9UHC9 1359 aa10.92□□□□□ -0.66
CCDC65-203ENST00000547861 ZNF772Q68DY9 489 aaPredicted RBP10.92□□□□□ -0.66
CCDC65-203ENST00000547861 DDX17Q92841 729 aaKnown RBP10.92□□□□□ -0.66
CCDC65-203ENST00000547861 YTHDC2Q9H6S0 1430 aaKnown RBP10.92□□□□□ -0.66
CCDC65-203ENST00000547861 BLMP54132 1417 aaPredicted RBP10.91□□□□□ -0.66
CCDC65-203ENST00000547861 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
CCDC65-203ENST00000547861 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
CCDC65-203ENST00000547861 NHSL1Q5SYE7 1610 aa10.91□□□□□ -0.66
CCDC65-203ENST00000547861 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
CCDC65-203ENST00000547861 LRRC59Q96AG4 307 aaKnown RBP10.9□□□□□ -0.66
CCDC65-203ENST00000547861 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.66
CCDC65-203ENST00000547861 ROBO2Q9HCK4 1378 aa10.89□□□□□ -0.67
CCDC65-203ENST00000547861 INSRP06213 1382 aa10.88□□□□□ -0.67
CCDC65-203ENST00000547861 ITSN1Q15811 1721 aa10.88□□□□□ -0.67
CCDC65-203ENST00000547861 PAK3O75914 559 aaPredicted RBP10.88□□□□□ -0.67
CCDC65-203ENST00000547861 RXRBP28702 533 aa10.88□□□□□ -0.67
CCDC65-203ENST00000547861 PTCH1Q13635 1447 aa10.88□□□□□ -0.67
CCDC65-203ENST00000547861 SMG6Q86US8 1419 aaKnown RBP10.88□□□□□ -0.67
CCDC65-203ENST00000547861 NSD3Q9BZ95 1437 aa10.88□□□□□ -0.67
CCDC65-203ENST00000547861 AFF2P51816 1311 aa10.87□□□□□ -0.67
CCDC65-203ENST00000547861 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
CCDC65-203ENST00000547861 NEFLP07196 543 aa10.87□□□□□ -0.67
CCDC65-203ENST00000547861 AKAP12Q02952 1782 aa10.87□□□□□ -0.67
CCDC65-203ENST00000547861 FKBP8Q14318 412 aa10.87□□□□□ -0.67
CCDC65-203ENST00000547861 ORAI2Q96SN7 254 aa10.87□□□□□ -0.67
CCDC65-203ENST00000547861 PNPLA6Q8IY17 1366 aa10.86□□□□□ -0.67
CCDC65-203ENST00000547861 EVC2Q86UK5 1308 aa10.86□□□□□ -0.67
CCDC65-203ENST00000547861 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
CCDC65-203ENST00000547861 C8orf37Q96NL8 207 aa10.86□□□□□ -0.67
CCDC65-203ENST00000547861 MON2Q7Z3U7 1717 aa10.86□□□□□ -0.67
CCDC65-203ENST00000547861 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
CCDC65-203ENST00000547861 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC65-203ENST00000547861 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
CCDC65-203ENST00000547861 ADAMTS2O95450 1211 aa10.84□□□□□ -0.67
CCDC65-203ENST00000547861 STK26Q9P289 416 aa10.84□□□□□ -0.67
CCDC65-203ENST00000547861 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
CCDC65-203ENST00000547861 TOPAZ1Q8N9V7 1692 aa10.84□□□□□ -0.67
CCDC65-203ENST00000547861 NINLQ9Y2I6 1382 aa10.84□□□□□ -0.67
CCDC65-203ENST00000547861 PUS7Q96PZ0 661 aaKnown RBP10.84□□□□□ -0.67
CCDC65-203ENST00000547861 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
CCDC65-203ENST00000547861 QTRT2Q9H974 415 aaKnown RBP10.84□□□□□ -0.67
CCDC65-203ENST00000547861 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
CCDC65-203ENST00000547861 ADGRB2O60241 1585 aa10.83□□□□□ -0.68
CCDC65-203ENST00000547861 SAFB2Q14151 953 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC65-203ENST00000547861 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
CCDC65-203ENST00000547861 CD163L1Q9NR16 1453 aa10.82□□□□□ -0.68
CCDC65-203ENST00000547861 SENP3-EIF4A1A0A087X0R7 540 aa10.82□□□□□ -0.68
CCDC65-203ENST00000547861 PRAM1Q96QH2 718 aa10.82□□□□□ -0.68
CCDC65-203ENST00000547861 NUDCQ9Y266 331 aa10.82□□□□□ -0.68
CCDC65-203ENST00000547861 TECPR2O15040 1411 aa10.82□□□□□ -0.68
CCDC65-203ENST00000547861 CDK12Q9NYV4 1490 aaPredicted RBP10.82□□□□□ -0.68
CCDC65-203ENST00000547861 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
CCDC65-203ENST00000547861 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
CCDC65-203ENST00000547861 SLC12A5Q9H2X9 1139 aa10.81□□□□□ -0.68
CCDC65-203ENST00000547861 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
CCDC65-203ENST00000547861 A0A1W2PP64 1363 aa10.81□□□□□ -0.68
CCDC65-203ENST00000547861 RBM6P78332 1123 aaKnown RBP10.81□□□□□ -0.68
CCDC65-203ENST00000547861 WAPLQ7Z5K2 1190 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms