RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TLL2Q9Y6L7 1015 aa6.7□□□□□ -1.34
DEPDC4-204ENST00000547823 SSTR3P32745 418 aaPredicted RBP6.69□□□□□ -1.34
DEPDC4-204ENST00000547823 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
DEPDC4-204ENST00000547823 SPIRE2Q8WWL2 714 aa6.69□□□□□ -1.34
DEPDC4-204ENST00000547823 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
DEPDC4-204ENST00000547823 WDR4P57081 412 aaKnown RBP6.68□□□□□ -1.34
DEPDC4-204ENST00000547823 UPP2O95045 317 aa6.67□□□□□ -1.34
DEPDC4-204ENST00000547823 TIMP2P16035 220 aa6.67□□□□□ -1.34
DEPDC4-204ENST00000547823 NR5A1Q13285 461 aa6.67□□□□□ -1.34
DEPDC4-204ENST00000547823 CDK15Q96Q40 435 aa6.67□□□□□ -1.34
DEPDC4-204ENST00000547823 ERBB4Q15303 1308 aa6.67□□□□□ -1.34
DEPDC4-204ENST00000547823 VEGFBP49765 207 aa6.66□□□□□ -1.34
DEPDC4-204ENST00000547823 TTLL12Q14166 644 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-204ENST00000547823 AMHR2Q16671 573 aa6.66□□□□□ -1.34
DEPDC4-204ENST00000547823 PURBQ96QR8 312 aaKnown RBP6.66□□□□□ -1.34
DEPDC4-204ENST00000547823 MOXD2PA6NHM9 499 aa6.65□□□□□ -1.34
DEPDC4-204ENST00000547823 SPTLC1O15269 473 aa6.65□□□□□ -1.34
DEPDC4-204ENST00000547823 CTHP32929 405 aa6.65□□□□□ -1.34
DEPDC4-204ENST00000547823 LYPD8Q6UX82 237 aa6.65□□□□□ -1.34
DEPDC4-204ENST00000547823 VSIG10Q8N0Z9 540 aa6.65□□□□□ -1.34
DEPDC4-204ENST00000547823 MAN1A2O60476 641 aa6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 NDUFV2P19404 249 aa6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 PRPF38BQ5VTL8 546 aaKnown RBP6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 BPHLQ86WA6 291 aaPredicted RBP6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 ARMC2Q8NEN0 867 aa6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 KLF16Q9BXK1 252 aaPredicted RBP6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 KDM2AQ9Y2K7 1162 aa6.64□□□□□ -1.35
DEPDC4-204ENST00000547823 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
DEPDC4-204ENST00000547823 ZBTB3Q9H5J0 574 aa6.63□□□□□ -1.35
DEPDC4-204ENST00000547823 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
DEPDC4-204ENST00000547823 RSBN1LQ6PCB5 846 aaPredicted RBP6.62□□□□□ -1.35
DEPDC4-204ENST00000547823 GIGYF2Q6Y7W6 1299 aaKnown RBP6.62□□□□□ -1.35
DEPDC4-204ENST00000547823 F12P00748 615 aaPredicted RBP6.61□□□□□ -1.35
DEPDC4-204ENST00000547823 AGERQ15109 404 aa6.61□□□□□ -1.35
DEPDC4-204ENST00000547823 BEGAINQ9BUH8 593 aa6.61□□□□□ -1.35
DEPDC4-204ENST00000547823 KCNMA1Q12791 1236 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 ARID5BQ14865 1188 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 NBPF14Q5TI25 921 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 BARGINQ6ZT62 677 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 MEIOBQ8N635 442 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 TBC1D2Q9BYX2 928 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 MAP4K5Q9Y4K4 846 aa6.6□□□□□ -1.35
DEPDC4-204ENST00000547823 BMP2P12643 396 aa6.59□□□□□ -1.35
DEPDC4-204ENST00000547823 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
DEPDC4-204ENST00000547823 PPFIA3O75145 1194 aa6.58□□□□□ -1.36
DEPDC4-204ENST00000547823 C6orf118Q5T5N4 469 aa6.58□□□□□ -1.36
DEPDC4-204ENST00000547823 FOXJ1Q92949 421 aa6.58□□□□□ -1.36
DEPDC4-204ENST00000547823 ITPKCQ96DU7 683 aa6.58□□□□□ -1.36
DEPDC4-204ENST00000547823 ZFAND3Q9H8U3 227 aa6.58□□□□□ -1.36
DEPDC4-204ENST00000547823 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
DEPDC4-204ENST00000547823 CFAP99D6REC4 459 aa6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 ZMYND10O75800 440 aa6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 TUSC1Q2TAM9 212 aa6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 TRMT44Q8IYL2 757 aaKnown RBP6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 GPKOWQ92917 476 aaPredicted RBP eCLIP6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 C1QTNF2Q9BXJ5 285 aa6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 MAP10Q9P2G4 905 aa6.57□□□□□ -1.36
DEPDC4-204ENST00000547823 SOS2Q07890 1332 aaPredicted RBP6.56□□□□□ -1.36
DEPDC4-204ENST00000547823 SOBPA7XYQ1 873 aa6.56□□□□□ -1.36
DEPDC4-204ENST00000547823 NR3C2P08235 984 aa6.56□□□□□ -1.36
DEPDC4-204ENST00000547823 HRCP23327 699 aa6.56□□□□□ -1.36
DEPDC4-204ENST00000547823 GRM5P41594 1212 aa6.55□□□□□ -1.36
DEPDC4-204ENST00000547823 RIC3Q7Z5B4 369 aa6.55□□□□□ -1.36
DEPDC4-204ENST00000547823 TMEM151AQ8N4L1 468 aa6.55□□□□□ -1.36
DEPDC4-204ENST00000547823 HELBQ8NG08 1087 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-204ENST00000547823 FSHRP23945 695 aa6.54□□□□□ -1.36
DEPDC4-204ENST00000547823 VASH1Q7L8A9 365 aaPredicted RBP6.54□□□□□ -1.36
DEPDC4-204ENST00000547823 SH3RF1Q7Z6J0 888 aa6.54□□□□□ -1.36
DEPDC4-204ENST00000547823 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
DEPDC4-204ENST00000547823 CDV3Q9UKY7 258 aaKnown RBP6.54□□□□□ -1.36
DEPDC4-204ENST00000547823 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
DEPDC4-204ENST00000547823 PARP9Q8IXQ6 854 aa6.53□□□□□ -1.36
DEPDC4-204ENST00000547823 CCDC116Q8IYX3 515 aa6.53□□□□□ -1.36
DEPDC4-204ENST00000547823 DNMT3LQ9UJW3 386 aa6.53□□□□□ -1.36
DEPDC4-204ENST00000547823 PCDHB15Q9Y5E8 787 aa6.53□□□□□ -1.36
DEPDC4-204ENST00000547823 TTLL8A6PVC2 850 aa6.52□□□□□ -1.37
DEPDC4-204ENST00000547823 NANOS1Q8WY41 292 aaKnown RBP6.52□□□□□ -1.37
DEPDC4-204ENST00000547823 NUTM2BA6NNL0 878 aaPredicted RBP6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 NUTM2EB1AL46 878 aaPredicted RBP6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 GDF11O95390 407 aa6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 DHX9Q08211 1270 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 SUZ12Q15022 739 aaKnown RBP6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 NUTM2DQ5VT03 806 aaPredicted RBP6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 SH3BP5LQ7L8J4 393 aa6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 NUTM2AQ8IVF1 878 aaPredicted RBP6.51□□□□□ -1.37
DEPDC4-204ENST00000547823 ZC3H15Q8WU90 426 aaKnown RBP6.5□□□□□ -1.37
DEPDC4-204ENST00000547823 TSC1Q92574 1164 aa6.5□□□□□ -1.37
DEPDC4-204ENST00000547823 AK7Q96M32 723 aa6.5□□□□□ -1.37
DEPDC4-204ENST00000547823 IGHA1P01876 353 aa6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 RASSF7Q02833 373 aa6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 PTSQ03393 145 aa6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 KCTD17Q8N5Z5 321 aa6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
DEPDC4-204ENST00000547823 MAGEB6P1A0A0J9YX57 407 aa6.48□□□□□ -1.37
DEPDC4-204ENST00000547823 PER1O15534 1290 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms