RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 HAP1P54257 671 aaPredicted RBP26.37■■□□□ 1.81
PRPF40B-206ENST00000547764 SLC24A1O60721 1099 aa26.35■■□□□ 1.81
PRPF40B-206ENST00000547764 FNBP4Q8N3X1 1017 aaPredicted RBP26.34■■□□□ 1.81
PRPF40B-206ENST00000547764 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
PRPF40B-206ENST00000547764 USP6P35125 1406 aa26.33■■□□□ 1.81
PRPF40B-206ENST00000547764 PUS7Q96PZ0 661 aaKnown RBP26.33■■□□□ 1.81
PRPF40B-206ENST00000547764 ABCA3Q99758 1704 aa26.32■■□□□ 1.8
PRPF40B-206ENST00000547764 NUTM2GQ5VZR2 741 aa26.32■■□□□ 1.8
PRPF40B-206ENST00000547764 BRD4O60885 1362 aaPredicted RBP26.32■■□□□ 1.8
PRPF40B-206ENST00000547764 ABTB2Q8N961 1025 aa26.31■■□□□ 1.8
PRPF40B-206ENST00000547764 ZNF692Q9BU19 519 aaPredicted RBP26.31■■□□□ 1.8
PRPF40B-206ENST00000547764 USP21Q9UK80 565 aa26.31■■□□□ 1.8
PRPF40B-206ENST00000547764 TMC1Q8TDI8 760 aa26.3■■□□□ 1.8
PRPF40B-206ENST00000547764 QTRT2Q9H974 415 aaKnown RBP26.29■■□□□ 1.8
PRPF40B-206ENST00000547764 CPSF1Q10570 1443 aaKnown RBP26.29■■□□□ 1.8
PRPF40B-206ENST00000547764 TMF1P82094 1093 aa26.28■■□□□ 1.8
PRPF40B-206ENST00000547764 SLC12A5Q9H2X9 1139 aa26.28■■□□□ 1.8
PRPF40B-206ENST00000547764 SSH2Q76I76 1423 aa26.28■■□□□ 1.8
PRPF40B-206ENST00000547764 CRYBG1Q9Y4K1 1723 aa26.26■■□□□ 1.79
PRPF40B-206ENST00000547764 AKAP12Q02952 1782 aa26.25■■□□□ 1.79
PRPF40B-206ENST00000547764 BCL9LQ86UU0 1499 aa26.25■■□□□ 1.79
PRPF40B-206ENST00000547764 FAM83GA6ND36 823 aa26.25■■□□□ 1.79
PRPF40B-206ENST00000547764 RXRBP28702 533 aa26.25■■□□□ 1.79
PRPF40B-206ENST00000547764 CD163L1Q9NR16 1453 aa26.24■■□□□ 1.79
PRPF40B-206ENST00000547764 KTN1Q86UP2 1357 aaKnown RBP26.24■■□□□ 1.79
PRPF40B-206ENST00000547764 SOCS7O14512 581 aa26.24■■□□□ 1.79
PRPF40B-206ENST00000547764 NLRP13Q86W25 1043 aa26.24■■□□□ 1.79
PRPF40B-206ENST00000547764 SLIT2O94813 1529 aa26.24■■□□□ 1.79
PRPF40B-206ENST00000547764 TTC21BQ7Z4L5 1316 aa26.23■■□□□ 1.79
PRPF40B-206ENST00000547764 TRPC5Q9UL62 973 aaPredicted RBP26.23■■□□□ 1.79
PRPF40B-206ENST00000547764 USP19O94966 1318 aa26.21■■□□□ 1.79
PRPF40B-206ENST00000547764 NLRP6P59044 892 aa26.21■■□□□ 1.79
PRPF40B-206ENST00000547764 EIF4G2P78344 907 aaKnown RBP eCLIP26.21■■□□□ 1.79
PRPF40B-206ENST00000547764 HDGFL2Q7Z4V5 671 aaPredicted RBP26.21■■□□□ 1.79
PRPF40B-206ENST00000547764 UNC5CLQ8IV45 518 aa26.21■■□□□ 1.79
PRPF40B-206ENST00000547764 RBM6P78332 1123 aaKnown RBP26.2■■□□□ 1.78
PRPF40B-206ENST00000547764 TERF2IPQ9NYB0 399 aa26.2■■□□□ 1.78
PRPF40B-206ENST00000547764 PHRF1Q9P1Y6 1649 aaKnown RBP26.2■■□□□ 1.78
PRPF40B-206ENST00000547764 ATRNO75882 1429 aa26.2■■□□□ 1.78
PRPF40B-206ENST00000547764 NINLQ9Y2I6 1382 aa26.2■■□□□ 1.78
PRPF40B-206ENST00000547764 TTC21AQ8NDW8 1320 aa26.19■■□□□ 1.78
PRPF40B-206ENST00000547764 CDCA8Q53HL2 280 aa26.19■■□□□ 1.78
PRPF40B-206ENST00000547764 HSPA5P11021 654 aaKnown RBP26.18■■□□□ 1.78
PRPF40B-206ENST00000547764 ZC3H6P61129 1189 aaKnown RBP26.18■■□□□ 1.78
PRPF40B-206ENST00000547764 NRKQ7Z2Y5 1582 aa26.18■■□□□ 1.78
PRPF40B-206ENST00000547764 MON2Q7Z3U7 1717 aa26.18■■□□□ 1.78
PRPF40B-206ENST00000547764 PRDM11Q9NQV5 511 aa26.18■■□□□ 1.78
PRPF40B-206ENST00000547764 A0A1W2PP64 1363 aa26.18■■□□□ 1.78
PRPF40B-206ENST00000547764 PIK3C2AO00443 1686 aa26.17■■□□□ 1.78
PRPF40B-206ENST00000547764 PLCH1Q4KWH8 1693 aa26.17■■□□□ 1.78
PRPF40B-206ENST00000547764 KIAA0232Q92628 1395 aa26.17■■□□□ 1.78
PRPF40B-206ENST00000547764 GCP02774 474 aa26.16■■□□□ 1.78
PRPF40B-206ENST00000547764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.16■■□□□ 1.78
PRPF40B-206ENST00000547764 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.15■■□□□ 1.78
PRPF40B-206ENST00000547764 BTG4Q9NY30 223 aa26.15■■□□□ 1.78
PRPF40B-206ENST00000547764 COL14A1Q05707 1796 aaKnown RBP26.15■■□□□ 1.78
PRPF40B-206ENST00000547764 NWD2Q9ULI1 1742 aa26.14■■□□□ 1.78
PRPF40B-206ENST00000547764 CDK12Q9NYV4 1490 aaPredicted RBP26.13■■□□□ 1.77
PRPF40B-206ENST00000547764 CHRNA2Q15822 529 aa26.13■■□□□ 1.77
PRPF40B-206ENST00000547764 GJD4Q96KN9 370 aaPredicted RBP26.13■■□□□ 1.77
PRPF40B-206ENST00000547764 EDC4Q6P2E9 1401 aaKnown RBP26.13■■□□□ 1.77
PRPF40B-206ENST00000547764 SLIT3O75094 1523 aa26.11■■□□□ 1.77
PRPF40B-206ENST00000547764 NME9Q86XW9 330 aa26.11■■□□□ 1.77
PRPF40B-206ENST00000547764 CPDO75976 1380 aa26.1■■□□□ 1.77
PRPF40B-206ENST00000547764 VPS72Q15906 364 aa26.1■■□□□ 1.77
PRPF40B-206ENST00000547764 ZRANB1Q9UGI0 708 aa26.1■■□□□ 1.77
PRPF40B-206ENST00000547764 ANKRD36BQ8N2N9 1353 aa26.09■■□□□ 1.77
PRPF40B-206ENST00000547764 RGS12O14924 1447 aa26.08■■□□□ 1.77
PRPF40B-206ENST00000547764 USP31Q70CQ4 1352 aa26.07■■□□□ 1.76
PRPF40B-206ENST00000547764 NRAPQ86VF7 1730 aa26.07■■□□□ 1.76
PRPF40B-206ENST00000547764 CCDC9Q9Y3X0 531 aaKnown RBP26.06■■□□□ 1.76
PRPF40B-206ENST00000547764 GLI3P10071 1580 aa26.05■■□□□ 1.76
PRPF40B-206ENST00000547764 KCNH5Q8NCM2 988 aa26.05■■□□□ 1.76
PRPF40B-206ENST00000547764 SOX12O15370 315 aa26.04■■□□□ 1.76
PRPF40B-206ENST00000547764 ZBTB7CA1YPR0 619 aa26.03■■□□□ 1.76
PRPF40B-206ENST00000547764 POLR3GLQ9BT43 218 aa26.03■■□□□ 1.76
PRPF40B-206ENST00000547764 STRN4Q9NRL3 753 aa26.02■■□□□ 1.76
PRPF40B-206ENST00000547764 MYOM1P52179 1685 aa26.02■■□□□ 1.76
PRPF40B-206ENST00000547764 CAMTA1Q9Y6Y1 1673 aa26.02■■□□□ 1.76
PRPF40B-206ENST00000547764 USP54Q70EL1 1684 aa26.01■■□□□ 1.75
PRPF40B-206ENST00000547764 LMO7Q8WWI1 1683 aa26■■□□□ 1.75
PRPF40B-206ENST00000547764 AATKQ6ZMQ8 1374 aa26■■□□□ 1.75
PRPF40B-206ENST00000547764 ARHGEF25Q86VW2 580 aa26■■□□□ 1.75
PRPF40B-206ENST00000547764 NFAT5O94916 1531 aa25.99■■□□□ 1.75
PRPF40B-206ENST00000547764 SPATA31A5Q5VU36 1347 aa25.99■■□□□ 1.75
PRPF40B-206ENST00000547764 SPATA31A7Q8IWB4 1347 aa25.99■■□□□ 1.75
PRPF40B-206ENST00000547764 C11orf95C9JLR9 678 aaPredicted RBP25.99■■□□□ 1.75
PRPF40B-206ENST00000547764 EVA1CP58658 441 aa25.99■■□□□ 1.75
PRPF40B-206ENST00000547764 OVOS2A0A0J9YW53 1432 aa25.98■■□□□ 1.75
PRPF40B-206ENST00000547764 OVOS2Q6IE36 1432 aa25.98■■□□□ 1.75
PRPF40B-206ENST00000547764 CARD14Q9BXL6 1004 aa25.98■■□□□ 1.75
PRPF40B-206ENST00000547764 ONECUT3O60422 494 aaPredicted RBP25.96■■□□□ 1.75
PRPF40B-206ENST00000547764 FYB1O15117 783 aa25.95■■□□□ 1.74
PRPF40B-206ENST00000547764 COG3Q96JB2 828 aa25.95■■□□□ 1.74
PRPF40B-206ENST00000547764 AXIN2Q9Y2T1 843 aa25.95■■□□□ 1.74
PRPF40B-206ENST00000547764 COL18A1P39060 1754 aa25.95■■□□□ 1.74
PRPF40B-206ENST00000547764 SPATA31A1Q5TZJ5 1347 aa25.94■■□□□ 1.74
PRPF40B-206ENST00000547764 LARP1Q6PKG0 1096 aaKnown RBP25.94■■□□□ 1.74
PRPF40B-206ENST00000547764 SEPT12Q8IYM1 358 aa25.94■■□□□ 1.74
PRPF40B-206ENST00000547764 COL5A2P05997 1499 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms