RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
RAB5C-204ENST00000547517 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
RAB5C-204ENST00000547517 CRYBG1Q9Y4K1 1723 aa16.7■□□□□ 0.26
RAB5C-204ENST00000547517 ST20-MTHFSA0A0A6YYL1 179 aa16.69■□□□□ 0.26
RAB5C-204ENST00000547517 USP6P35125 1406 aa16.68■□□□□ 0.26
RAB5C-204ENST00000547517 PHRF1Q9P1Y6 1649 aaKnown RBP16.67■□□□□ 0.26
RAB5C-204ENST00000547517 TESK2Q96S53 571 aa16.67■□□□□ 0.26
RAB5C-204ENST00000547517 USP21Q9UK80 565 aa16.67■□□□□ 0.26
RAB5C-204ENST00000547517 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
RAB5C-204ENST00000547517 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
RAB5C-204ENST00000547517 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
RAB5C-204ENST00000547517 FNBP4Q8N3X1 1017 aaPredicted RBP16.65■□□□□ 0.26
RAB5C-204ENST00000547517 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
RAB5C-204ENST00000547517 ABTB2Q8N961 1025 aa16.64■□□□□ 0.25
RAB5C-204ENST00000547517 SLIT2O94813 1529 aa16.64■□□□□ 0.25
RAB5C-204ENST00000547517 ATRNO75882 1429 aa16.63■□□□□ 0.25
RAB5C-204ENST00000547517 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
RAB5C-204ENST00000547517 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.63■□□□□ 0.25
RAB5C-204ENST00000547517 RXRBP28702 533 aa16.63■□□□□ 0.25
RAB5C-204ENST00000547517 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
RAB5C-204ENST00000547517 BRD4O60885 1362 aaPredicted RBP16.63■□□□□ 0.25
RAB5C-204ENST00000547517 PIK3C2AO00443 1686 aa16.62■□□□□ 0.25
RAB5C-204ENST00000547517 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
RAB5C-204ENST00000547517 MON2Q7Z3U7 1717 aa16.62■□□□□ 0.25
RAB5C-204ENST00000547517 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
RAB5C-204ENST00000547517 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
RAB5C-204ENST00000547517 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
RAB5C-204ENST00000547517 NWD2Q9ULI1 1742 aa16.61■□□□□ 0.25
RAB5C-204ENST00000547517 KTN1Q86UP2 1357 aaKnown RBP16.61■□□□□ 0.25
RAB5C-204ENST00000547517 COL14A1Q05707 1796 aaKnown RBP16.61■□□□□ 0.25
RAB5C-204ENST00000547517 RGS12O14924 1447 aa16.61■□□□□ 0.25
RAB5C-204ENST00000547517 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
RAB5C-204ENST00000547517 USP19O94966 1318 aa16.6■□□□□ 0.25
RAB5C-204ENST00000547517 CDK12Q9NYV4 1490 aaPredicted RBP16.6■□□□□ 0.25
RAB5C-204ENST00000547517 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
RAB5C-204ENST00000547517 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
RAB5C-204ENST00000547517 TMF1P82094 1093 aa16.59■□□□□ 0.25
RAB5C-204ENST00000547517 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
RAB5C-204ENST00000547517 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
RAB5C-204ENST00000547517 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
RAB5C-204ENST00000547517 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
RAB5C-204ENST00000547517 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
RAB5C-204ENST00000547517 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
RAB5C-204ENST00000547517 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
RAB5C-204ENST00000547517 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
RAB5C-204ENST00000547517 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
RAB5C-204ENST00000547517 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.24
RAB5C-204ENST00000547517 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
RAB5C-204ENST00000547517 NINLQ9Y2I6 1382 aa16.57■□□□□ 0.24
RAB5C-204ENST00000547517 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-204ENST00000547517 SLIT3O75094 1523 aa16.56■□□□□ 0.24
RAB5C-204ENST00000547517 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
RAB5C-204ENST00000547517 NLRP6P59044 892 aa16.56■□□□□ 0.24
RAB5C-204ENST00000547517 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
RAB5C-204ENST00000547517 GLI3P10071 1580 aa16.55■□□□□ 0.24
RAB5C-204ENST00000547517 CHRNA2Q15822 529 aa16.55■□□□□ 0.24
RAB5C-204ENST00000547517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAB5C-204ENST00000547517 BTG4Q9NY30 223 aa16.55■□□□□ 0.24
RAB5C-204ENST00000547517 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
RAB5C-204ENST00000547517 EDC4Q6P2E9 1401 aaKnown RBP16.54■□□□□ 0.24
RAB5C-204ENST00000547517 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
RAB5C-204ENST00000547517 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
RAB5C-204ENST00000547517 GCP02774 474 aa16.53■□□□□ 0.24
RAB5C-204ENST00000547517 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
RAB5C-204ENST00000547517 MYOM1P52179 1685 aa16.53■□□□□ 0.24
RAB5C-204ENST00000547517 CPDO75976 1380 aa16.52■□□□□ 0.24
RAB5C-204ENST00000547517 ZBTB7CA1YPR0 619 aa16.52■□□□□ 0.24
RAB5C-204ENST00000547517 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.24
RAB5C-204ENST00000547517 VPS72Q15906 364 aa16.52■□□□□ 0.24
RAB5C-204ENST00000547517 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
RAB5C-204ENST00000547517 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
RAB5C-204ENST00000547517 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
RAB5C-204ENST00000547517 SOX12O15370 315 aa16.51■□□□□ 0.23
RAB5C-204ENST00000547517 NME9Q86XW9 330 aa16.51■□□□□ 0.23
RAB5C-204ENST00000547517 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
RAB5C-204ENST00000547517 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
RAB5C-204ENST00000547517 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
RAB5C-204ENST00000547517 NFAT5O94916 1531 aa16.49■□□□□ 0.23
RAB5C-204ENST00000547517 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
RAB5C-204ENST00000547517 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
RAB5C-204ENST00000547517 USP31Q70CQ4 1352 aa16.48■□□□□ 0.23
RAB5C-204ENST00000547517 OVOS2A0A0J9YW53 1432 aa16.47■□□□□ 0.23
RAB5C-204ENST00000547517 OVOS2Q6IE36 1432 aa16.47■□□□□ 0.23
RAB5C-204ENST00000547517 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
RAB5C-204ENST00000547517 COL5A2P05997 1499 aaPredicted RBP16.46■□□□□ 0.23
RAB5C-204ENST00000547517 A0A0G2JS52 829 aa16.45■□□□□ 0.22
RAB5C-204ENST00000547517 MYT1Q01538 1121 aa16.45■□□□□ 0.22
RAB5C-204ENST00000547517 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
RAB5C-204ENST00000547517 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
RAB5C-204ENST00000547517 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
RAB5C-204ENST00000547517 EVA1CP58658 441 aa16.44■□□□□ 0.22
RAB5C-204ENST00000547517 COL18A1P39060 1754 aa16.43■□□□□ 0.22
RAB5C-204ENST00000547517 FAM98CQ17RN3 349 aaKnown RBP16.43■□□□□ 0.22
RAB5C-204ENST00000547517 SPATA31A1Q5TZJ5 1347 aa16.43■□□□□ 0.22
RAB5C-204ENST00000547517 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
RAB5C-204ENST00000547517 LARP1Q6PKG0 1096 aaKnown RBP16.42■□□□□ 0.22
RAB5C-204ENST00000547517 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
RAB5C-204ENST00000547517 SEPT12Q8IYM1 358 aa16.42■□□□□ 0.22
RAB5C-204ENST00000547517 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
RAB5C-204ENST00000547517 THSD7AQ9UPZ6 1657 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms