RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 TNS3Q68CZ2 1445 aa28.94■■■□□ 2.22
GPN3-205ENST00000547323 MON2Q7Z3U7 1717 aa28.94■■■□□ 2.22
GPN3-205ENST00000547323 WASHC2AQ641Q2 1341 aa28.94■■■□□ 2.22
GPN3-205ENST00000547323 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
GPN3-205ENST00000547323 SSH2Q76I76 1423 aa28.93■■■□□ 2.22
GPN3-205ENST00000547323 ALS2Q96Q42 1657 aa28.93■■■□□ 2.22
GPN3-205ENST00000547323 CCDC7Q96M83 1385 aa28.92■■■□□ 2.22
GPN3-205ENST00000547323 PLEKHG5O94827 1062 aa28.92■■■□□ 2.22
GPN3-205ENST00000547323 TTC21BQ7Z4L5 1316 aa28.91■■■□□ 2.22
GPN3-205ENST00000547323 ANKRD36BQ8N2N9 1353 aa28.9■■■□□ 2.22
GPN3-205ENST00000547323 NUTM2GQ5VZR2 741 aa28.9■■■□□ 2.22
GPN3-205ENST00000547323 NRKQ7Z2Y5 1582 aa28.88■■■□□ 2.21
GPN3-205ENST00000547323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.88■■■□□ 2.21
GPN3-205ENST00000547323 NUTM2BA6NNL0 878 aaPredicted RBP28.87■■■□□ 2.21
GPN3-205ENST00000547323 NUTM2EB1AL46 878 aaPredicted RBP28.87■■■□□ 2.21
GPN3-205ENST00000547323 NUTM2AQ8IVF1 878 aaPredicted RBP28.87■■■□□ 2.21
GPN3-205ENST00000547323 ABTB2Q8N961 1025 aa28.87■■■□□ 2.21
GPN3-205ENST00000547323 CABLES1Q8TDN4 633 aa28.87■■■□□ 2.21
GPN3-205ENST00000547323 CARD14Q9BXL6 1004 aa28.87■■■□□ 2.21
GPN3-205ENST00000547323 BRD4O60885 1362 aaPredicted RBP28.87■■■□□ 2.21
GPN3-205ENST00000547323 COL22A1Q8NFW1 1626 aaPredicted RBP28.86■■■□□ 2.21
GPN3-205ENST00000547323 ARHGEF10O15013 1369 aa28.86■■■□□ 2.21
GPN3-205ENST00000547323 PANK3Q9H999 370 aa28.85■■■□□ 2.21
GPN3-205ENST00000547323 EDC4Q6P2E9 1401 aaKnown RBP28.84■■■□□ 2.21
GPN3-205ENST00000547323 ZRANB1Q9UGI0 708 aa28.83■■■□□ 2.21
GPN3-205ENST00000547323 SPATA31A6Q5VVP1 1343 aa28.83■■■□□ 2.21
GPN3-205ENST00000547323 PIK3C2AO00443 1686 aa28.83■■■□□ 2.21
GPN3-205ENST00000547323 NME9Q86XW9 330 aa28.82■■■□□ 2.2
GPN3-205ENST00000547323 TTC21AQ8NDW8 1320 aa28.81■■■□□ 2.2
GPN3-205ENST00000547323 LRP6O75581 1613 aa28.8■■■□□ 2.2
GPN3-205ENST00000547323 NLRP6P59044 892 aa28.8■■■□□ 2.2
GPN3-205ENST00000547323 MED1Q15648 1581 aaPredicted RBP28.79■■■□□ 2.2
GPN3-205ENST00000547323 NSD3Q9BZ95 1437 aa28.77■■■□□ 2.2
GPN3-205ENST00000547323 NLRP13Q86W25 1043 aa28.77■■■□□ 2.2
GPN3-205ENST00000547323 ABCA3Q99758 1704 aa28.77■■■□□ 2.2
GPN3-205ENST00000547323 CRYBG1Q9Y4K1 1723 aa28.77■■■□□ 2.2
GPN3-205ENST00000547323 ADAMTS2O95450 1211 aa28.76■■■□□ 2.19
GPN3-205ENST00000547323 MARF1Q9Y4F3 1742 aaKnown RBP28.76■■■□□ 2.19
GPN3-205ENST00000547323 FYB1O15117 783 aa28.73■■■□□ 2.19
GPN3-205ENST00000547323 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
GPN3-205ENST00000547323 USP19O94966 1318 aa28.72■■■□□ 2.19
GPN3-205ENST00000547323 PHRF1Q9P1Y6 1649 aaKnown RBP28.71■■■□□ 2.19
GPN3-205ENST00000547323 USP31Q70CQ4 1352 aa28.71■■■□□ 2.19
GPN3-205ENST00000547323 GGNBP2Q9H3C7 697 aa28.7■■■□□ 2.18
GPN3-205ENST00000547323 KIF20BQ96Q89 1820 aa28.69■■■□□ 2.18
GPN3-205ENST00000547323 MEX3CQ5U5Q3 659 aaKnown RBP28.69■■■□□ 2.18
GPN3-205ENST00000547323 GCP02774 474 aa28.68■■■□□ 2.18
GPN3-205ENST00000547323 SOX12O15370 315 aa28.67■■■□□ 2.18
GPN3-205ENST00000547323 PER1O15534 1290 aaPredicted RBP28.67■■■□□ 2.18
GPN3-205ENST00000547323 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
GPN3-205ENST00000547323 SLIT3O75094 1523 aa28.66■■■□□ 2.18
GPN3-205ENST00000547323 ZNF316A6NFI3 1004 aaPredicted RBP28.66■■■□□ 2.18
GPN3-205ENST00000547323 ZC3H6P61129 1189 aaKnown RBP28.66■■■□□ 2.18
GPN3-205ENST00000547323 CGNL1Q0VF96 1302 aa28.66■■■□□ 2.18
GPN3-205ENST00000547323 C8orf37Q96NL8 207 aa28.65■■■□□ 2.18
GPN3-205ENST00000547323 KNSTRNQ9Y448 316 aa28.65■■■□□ 2.18
GPN3-205ENST00000547323 OVOS2A0A0J9YW53 1432 aa28.65■■■□□ 2.18
GPN3-205ENST00000547323 OVOS2Q6IE36 1432 aa28.65■■■□□ 2.18
GPN3-205ENST00000547323 COG3Q96JB2 828 aa28.64■■■□□ 2.18
GPN3-205ENST00000547323 FAM83GA6ND36 823 aa28.62■■■□□ 2.17
GPN3-205ENST00000547323 FBLN1P23142 703 aa28.62■■■□□ 2.17
GPN3-205ENST00000547323 DDX10Q13206 875 aaKnown RBP28.62■■■□□ 2.17
GPN3-205ENST00000547323 NGLY1Q96IV0 654 aa28.61■■■□□ 2.17
GPN3-205ENST00000547323 KIAA0232Q92628 1395 aa28.61■■■□□ 2.17
GPN3-205ENST00000547323 CHRNA2Q15822 529 aa28.59■■■□□ 2.17
GPN3-205ENST00000547323 AMER1Q5JTC6 1135 aaPredicted RBP28.59■■■□□ 2.17
GPN3-205ENST00000547323 KCNH5Q8NCM2 988 aa28.59■■■□□ 2.17
GPN3-205ENST00000547323 NFAT5O94916 1531 aa28.59■■■□□ 2.17
GPN3-205ENST00000547323 ZBTB7CA1YPR0 619 aa28.58■■■□□ 2.17
GPN3-205ENST00000547323 PRDM11Q9NQV5 511 aa28.58■■■□□ 2.17
GPN3-205ENST00000547323 AFF2P51816 1311 aa28.56■■■□□ 2.16
GPN3-205ENST00000547323 CNGB1Q14028 1251 aaPredicted RBP28.55■■■□□ 2.16
GPN3-205ENST00000547323 ARHGEF25Q86VW2 580 aa28.55■■■□□ 2.16
GPN3-205ENST00000547323 RGS17Q9UGC6 210 aaPredicted RBP28.55■■■□□ 2.16
GPN3-205ENST00000547323 ANKRD26Q9UPS8 1709 aa28.55■■■□□ 2.16
GPN3-205ENST00000547323 CPDO75976 1380 aa28.54■■■□□ 2.16
GPN3-205ENST00000547323 CC2D1BQ5T0F9 858 aaKnown RBP28.53■■■□□ 2.16
GPN3-205ENST00000547323 FNBP4Q8N3X1 1017 aaPredicted RBP28.53■■■□□ 2.16
GPN3-205ENST00000547323 COL14A1Q05707 1796 aaKnown RBP28.52■■■□□ 2.16
GPN3-205ENST00000547323 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
GPN3-205ENST00000547323 PLCH1Q4KWH8 1693 aa28.51■■■□□ 2.16
GPN3-205ENST00000547323 TNNT2P45379 298 aaPredicted RBP28.51■■■□□ 2.15
GPN3-205ENST00000547323 LTN1O94822 1766 aa28.51■■■□□ 2.15
GPN3-205ENST00000547323 NSD2O96028 1365 aa28.5■■■□□ 2.15
GPN3-205ENST00000547323 SLIT2O94813 1529 aa28.5■■■□□ 2.15
GPN3-205ENST00000547323 BTG4Q9NY30 223 aa28.5■■■□□ 2.15
GPN3-205ENST00000547323 COL18A1P39060 1754 aa28.5■■■□□ 2.15
GPN3-205ENST00000547323 RRS1Q15050 365 aaKnown RBP28.49■■■□□ 2.15
GPN3-205ENST00000547323 MORC1Q86VD1 984 aa28.49■■■□□ 2.15
GPN3-205ENST00000547323 USP21Q9UK80 565 aa28.49■■■□□ 2.15
GPN3-205ENST00000547323 BCL9LQ86UU0 1499 aa28.48■■■□□ 2.15
GPN3-205ENST00000547323 RGPD5Q99666 1765 aa28.47■■■□□ 2.15
GPN3-205ENST00000547323 AXIN2Q9Y2T1 843 aa28.47■■■□□ 2.15
GPN3-205ENST00000547323 CAMTA1Q9Y6Y1 1673 aa28.47■■■□□ 2.15
GPN3-205ENST00000547323 MAP3K19Q56UN5 1328 aa28.46■■■□□ 2.15
GPN3-205ENST00000547323 LMO7Q8WWI1 1683 aa28.46■■■□□ 2.15
GPN3-205ENST00000547323 AATKQ6ZMQ8 1374 aa28.46■■■□□ 2.15
GPN3-205ENST00000547323 MAP2P11137 1827 aaKnown RBP28.46■■■□□ 2.15
GPN3-205ENST00000547323 NWD2Q9ULI1 1742 aa28.45■■■□□ 2.14
GPN3-205ENST00000547323 NPC1L1Q9UHC9 1359 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms