RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 SKOR2Q2VWA4 1001 aaPredicted RBP13.44□□□□□ -0.26
NPAS3-205ENST00000547068 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
NPAS3-205ENST00000547068 SETD1BQ9UPS6 1966 aaKnown RBP13.44□□□□□ -0.26
NPAS3-205ENST00000547068 ZSCAN30Q86W11 494 aa13.44□□□□□ -0.26
NPAS3-205ENST00000547068 TNPO1Q92973 898 aaKnown RBP13.44□□□□□ -0.26
NPAS3-205ENST00000547068 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
NPAS3-205ENST00000547068 OFD1O75665 1012 aa13.43□□□□□ -0.26
NPAS3-205ENST00000547068 RLBP1P12271 317 aa13.43□□□□□ -0.26
NPAS3-205ENST00000547068 RARSP54136 660 aaKnown RBP13.43□□□□□ -0.26
NPAS3-205ENST00000547068 RBM10P98175 930 aaKnown RBP13.43□□□□□ -0.26
NPAS3-205ENST00000547068 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
NPAS3-205ENST00000547068 PRDM4Q9UKN5 801 aa13.43□□□□□ -0.26
NPAS3-205ENST00000547068 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
NPAS3-205ENST00000547068 NEURL4Q96JN8 1562 aa13.42□□□□□ -0.26
NPAS3-205ENST00000547068 MSNP26038 577 aaKnown RBP13.42□□□□□ -0.26
NPAS3-205ENST00000547068 DDIT3P35638 169 aa13.42□□□□□ -0.26
NPAS3-205ENST00000547068 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
NPAS3-205ENST00000547068 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
NPAS3-205ENST00000547068 CDCA8Q53HL2 280 aa13.42□□□□□ -0.26
NPAS3-205ENST00000547068 TNNQ9UQP3 1299 aa13.42□□□□□ -0.26
NPAS3-205ENST00000547068 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
NPAS3-205ENST00000547068 PTMSP20962 102 aa13.41□□□□□ -0.26
NPAS3-205ENST00000547068 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
NPAS3-205ENST00000547068 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
NPAS3-205ENST00000547068 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
NPAS3-205ENST00000547068 TERF1P54274 439 aa13.41□□□□□ -0.26
NPAS3-205ENST00000547068 ADGRB3O60242 1522 aa13.4□□□□□ -0.26
NPAS3-205ENST00000547068 RIPK4P57078 832 aa13.4□□□□□ -0.26
NPAS3-205ENST00000547068 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
NPAS3-205ENST00000547068 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
NPAS3-205ENST00000547068 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
NPAS3-205ENST00000547068 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
NPAS3-205ENST00000547068 TMEM131LA2VDJ0 1609 aa13.4□□□□□ -0.27
NPAS3-205ENST00000547068 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
NPAS3-205ENST00000547068 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
NPAS3-205ENST00000547068 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
NPAS3-205ENST00000547068 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
NPAS3-205ENST00000547068 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
NPAS3-205ENST00000547068 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
NPAS3-205ENST00000547068 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
NPAS3-205ENST00000547068 SNX21Q969T3 373 aa13.38□□□□□ -0.27
NPAS3-205ENST00000547068 MYO5BQ9ULV0 1848 aa13.38□□□□□ -0.27
NPAS3-205ENST00000547068 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
NPAS3-205ENST00000547068 A2ML1A8K2U0 1454 aa13.37□□□□□ -0.27
NPAS3-205ENST00000547068 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPAS3-205ENST00000547068 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
NPAS3-205ENST00000547068 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
NPAS3-205ENST00000547068 MYO3AQ8NEV4 1616 aa13.36□□□□□ -0.27
NPAS3-205ENST00000547068 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
NPAS3-205ENST00000547068 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
NPAS3-205ENST00000547068 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
NPAS3-205ENST00000547068 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
NPAS3-205ENST00000547068 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
NPAS3-205ENST00000547068 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
NPAS3-205ENST00000547068 GOLGA6L22H0YM25 854 aa13.34□□□□□ -0.27
NPAS3-205ENST00000547068 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
NPAS3-205ENST00000547068 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
NPAS3-205ENST00000547068 PPLO60437 1756 aa13.34□□□□□ -0.27
NPAS3-205ENST00000547068 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
NPAS3-205ENST00000547068 TMEM2Q9UHN6 1383 aa13.34□□□□□ -0.27
NPAS3-205ENST00000547068 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
NPAS3-205ENST00000547068 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
NPAS3-205ENST00000547068 MYOM2P54296 1465 aa13.33□□□□□ -0.28
NPAS3-205ENST00000547068 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
NPAS3-205ENST00000547068 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
NPAS3-205ENST00000547068 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
NPAS3-205ENST00000547068 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 MYOM1P52179 1685 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
NPAS3-205ENST00000547068 UQCRHLA0A096LP55 91 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 UQCRHP07919 91 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 HS1BP3Q53T59 392 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 KLHL40Q2TBA0 621 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 ZKSCAN2Q63HK3 967 aa13.32□□□□□ -0.28
NPAS3-205ENST00000547068 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
NPAS3-205ENST00000547068 HDAC1Q13547 482 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 MTERF4Q7Z6M4 381 aaKnown RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 WDR63Q8IWG1 891 aa13.31□□□□□ -0.28
NPAS3-205ENST00000547068 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 DZIP1LQ8IYY4 767 aaKnown RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
NPAS3-205ENST00000547068 NOL7Q9UMY1 257 aaKnown RBP13.31□□□□□ -0.28
NPAS3-205ENST00000547068 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
NPAS3-205ENST00000547068 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
NPAS3-205ENST00000547068 SCAF11Q99590 1463 aaKnown RBP13.3□□□□□ -0.28
NPAS3-205ENST00000547068 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
NPAS3-205ENST00000547068 SSFA2P28290 1259 aa13.3□□□□□ -0.28
NPAS3-205ENST00000547068 XPCQ01831 940 aaPredicted RBP13.3□□□□□ -0.28
NPAS3-205ENST00000547068 A0A0U1RQG5 324 aaPredicted RBP13.29□□□□□ -0.28
NPAS3-205ENST00000547068 ARID3AQ99856 593 aa13.29□□□□□ -0.28
NPAS3-205ENST00000547068 K7ELQ4 463 aaPredicted RBP13.29□□□□□ -0.28
NPAS3-205ENST00000547068 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
NPAS3-205ENST00000547068 SLIT1O75093 1534 aa13.28□□□□□ -0.28
NPAS3-205ENST00000547068 DYNC1I1O14576 645 aa13.28□□□□□ -0.28
NPAS3-205ENST00000547068 LTKP29376 864 aa13.28□□□□□ -0.28
NPAS3-205ENST00000547068 CFAP70Q5T0N1 1121 aa13.28□□□□□ -0.28
NPAS3-205ENST00000547068 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms