RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
SCAF11-209ENST00000547018 LTV1Q96GA3 475 aaPredicted RBP16.4■□□□□ 0.22
SCAF11-209ENST00000547018 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
SCAF11-209ENST00000547018 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
SCAF11-209ENST00000547018 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
SCAF11-209ENST00000547018 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
SCAF11-209ENST00000547018 FAM83GA6ND36 823 aa16.39■□□□□ 0.21
SCAF11-209ENST00000547018 IGHDP01880 384 aa16.39■□□□□ 0.21
SCAF11-209ENST00000547018 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
SCAF11-209ENST00000547018 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
SCAF11-209ENST00000547018 NKTRP30414 1462 aaKnown RBP16.39■□□□□ 0.21
SCAF11-209ENST00000547018 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
SCAF11-209ENST00000547018 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
SCAF11-209ENST00000547018 MYH16Q9H6N6 1097 aa16.38■□□□□ 0.21
SCAF11-209ENST00000547018 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
SCAF11-209ENST00000547018 ITPRIPQ8IWB1 547 aa16.37■□□□□ 0.21
SCAF11-209ENST00000547018 SETBP1Q9Y6X0 1596 aa16.37■□□□□ 0.21
SCAF11-209ENST00000547018 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
SCAF11-209ENST00000547018 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
SCAF11-209ENST00000547018 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
SCAF11-209ENST00000547018 PTPRMP28827 1452 aa16.36■□□□□ 0.21
SCAF11-209ENST00000547018 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
SCAF11-209ENST00000547018 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
SCAF11-209ENST00000547018 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
SCAF11-209ENST00000547018 PRR36Q9H6K5 1346 aa16.35■□□□□ 0.21
SCAF11-209ENST00000547018 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
SCAF11-209ENST00000547018 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
SCAF11-209ENST00000547018 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
SCAF11-209ENST00000547018 ACEP12821 1306 aa16.34■□□□□ 0.21
SCAF11-209ENST00000547018 SSH1Q8WYL5 1049 aa16.34■□□□□ 0.21
SCAF11-209ENST00000547018 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.2
SCAF11-209ENST00000547018 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.2
SCAF11-209ENST00000547018 XPCQ01831 940 aaPredicted RBP16.33■□□□□ 0.2
SCAF11-209ENST00000547018 HSP90AB2PQ58FF8 381 aa16.33■□□□□ 0.2
SCAF11-209ENST00000547018 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
SCAF11-209ENST00000547018 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.2
SCAF11-209ENST00000547018 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
SCAF11-209ENST00000547018 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
SCAF11-209ENST00000547018 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
SCAF11-209ENST00000547018 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
SCAF11-209ENST00000547018 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
SCAF11-209ENST00000547018 TMEM2Q9UHN6 1383 aa16.31■□□□□ 0.2
SCAF11-209ENST00000547018 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
SCAF11-209ENST00000547018 ZFYVE9O95405 1425 aa16.3■□□□□ 0.2
SCAF11-209ENST00000547018 KRT24Q2M2I5 525 aa16.3■□□□□ 0.2
SCAF11-209ENST00000547018 PLEKHF1Q96S99 279 aa16.3■□□□□ 0.2
SCAF11-209ENST00000547018 C1orf115Q9H7X2 142 aa16.3■□□□□ 0.2
SCAF11-209ENST00000547018 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
SCAF11-209ENST00000547018 IPO9Q96P70 1041 aaKnown RBP16.29■□□□□ 0.2
SCAF11-209ENST00000547018 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
SCAF11-209ENST00000547018 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
SCAF11-209ENST00000547018 KCNA6P17658 529 aa16.29■□□□□ 0.2
SCAF11-209ENST00000547018 INSRP06213 1382 aa16.28■□□□□ 0.2
SCAF11-209ENST00000547018 NLRP6P59044 892 aa16.28■□□□□ 0.2
SCAF11-209ENST00000547018 MCM10Q7L590 875 aa16.28■□□□□ 0.2
SCAF11-209ENST00000547018 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
SCAF11-209ENST00000547018 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
SCAF11-209ENST00000547018 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
SCAF11-209ENST00000547018 AMPHP49418 695 aa16.28■□□□□ 0.2
SCAF11-209ENST00000547018 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
SCAF11-209ENST00000547018 NSD2O96028 1365 aa16.27■□□□□ 0.2
SCAF11-209ENST00000547018 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
SCAF11-209ENST00000547018 FCHSD2O94868 740 aa16.26■□□□□ 0.19
SCAF11-209ENST00000547018 TRIM27P14373 513 aa16.26■□□□□ 0.19
SCAF11-209ENST00000547018 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
SCAF11-209ENST00000547018 CD163L1Q9NR16 1453 aa16.26■□□□□ 0.19
SCAF11-209ENST00000547018 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
SCAF11-209ENST00000547018 APBB1O00213 710 aa16.25■□□□□ 0.19
SCAF11-209ENST00000547018 FOXO3O43524 673 aa16.25■□□□□ 0.19
SCAF11-209ENST00000547018 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
SCAF11-209ENST00000547018 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
SCAF11-209ENST00000547018 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
SCAF11-209ENST00000547018 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
SCAF11-209ENST00000547018 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
SCAF11-209ENST00000547018 KDM2BQ8NHM5 1336 aa16.24■□□□□ 0.19
SCAF11-209ENST00000547018 USHBP1Q8N6Y0 703 aa16.23■□□□□ 0.19
SCAF11-209ENST00000547018 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
SCAF11-209ENST00000547018 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
SCAF11-209ENST00000547018 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
SCAF11-209ENST00000547018 NINLQ9Y2I6 1382 aa16.22■□□□□ 0.19
SCAF11-209ENST00000547018 IL13P35225 146 aa16.22■□□□□ 0.19
SCAF11-209ENST00000547018 EIF4A2Q14240 407 aaKnown RBP16.22■□□□□ 0.19
SCAF11-209ENST00000547018 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-209ENST00000547018 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
SCAF11-209ENST00000547018 KIF13AQ9H1H9 1805 aa16.21■□□□□ 0.19
SCAF11-209ENST00000547018 ESCO1Q5FWF5 840 aa16.2■□□□□ 0.18
SCAF11-209ENST00000547018 C8orf58Q8NAV2 365 aa16.2■□□□□ 0.18
SCAF11-209ENST00000547018 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
SCAF11-209ENST00000547018 ATF7IPQ6VMQ6 1270 aa16.2■□□□□ 0.18
SCAF11-209ENST00000547018 SPRYD3Q8NCJ5 442 aa16.2■□□□□ 0.18
SCAF11-209ENST00000547018 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
SCAF11-209ENST00000547018 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
SCAF11-209ENST00000547018 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
SCAF11-209ENST00000547018 MS4A1P11836 297 aa16.19■□□□□ 0.18
SCAF11-209ENST00000547018 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
SCAF11-209ENST00000547018 SEC24BO95487 1268 aa16.19■□□□□ 0.18
SCAF11-209ENST00000547018 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
SCAF11-209ENST00000547018 AGLP35573 1532 aa16.18■□□□□ 0.18
SCAF11-209ENST00000547018 SETD1BQ9UPS6 1966 aaKnown RBP16.18■□□□□ 0.18
SCAF11-209ENST00000547018 CPS1P31327 1500 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms