RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
LETMD1-205ENST00000546992 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
LETMD1-205ENST00000546992 HDGFL2Q7Z4V5 671 aaPredicted RBP22.54■■□□□ 1.2
LETMD1-205ENST00000546992 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
LETMD1-205ENST00000546992 SOS2Q07890 1332 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-205ENST00000546992 CRYBG1Q9Y4K1 1723 aa22.52■■□□□ 1.2
LETMD1-205ENST00000546992 PER1O15534 1290 aaPredicted RBP22.52■■□□□ 1.2
LETMD1-205ENST00000546992 KRT28Q7Z3Y7 464 aa22.52■■□□□ 1.2
LETMD1-205ENST00000546992 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
LETMD1-205ENST00000546992 PSME1Q06323 249 aa22.5■■□□□ 1.19
LETMD1-205ENST00000546992 TTC21BQ7Z4L5 1316 aa22.5■■□□□ 1.19
LETMD1-205ENST00000546992 TNS3Q68CZ2 1445 aa22.49■■□□□ 1.19
LETMD1-205ENST00000546992 ABCA3Q99758 1704 aa22.49■■□□□ 1.19
LETMD1-205ENST00000546992 SBNO1A3KN83 1393 aa22.49■■□□□ 1.19
LETMD1-205ENST00000546992 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
LETMD1-205ENST00000546992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.46■■□□□ 1.19
LETMD1-205ENST00000546992 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
LETMD1-205ENST00000546992 COL22A1Q8NFW1 1626 aaPredicted RBP22.46■■□□□ 1.19
LETMD1-205ENST00000546992 PHRF1Q9P1Y6 1649 aaKnown RBP22.46■■□□□ 1.19
LETMD1-205ENST00000546992 NME9Q86XW9 330 aa22.45■■□□□ 1.18
LETMD1-205ENST00000546992 ZRANB1Q9UGI0 708 aa22.45■■□□□ 1.18
LETMD1-205ENST00000546992 SPATA31A3Q5VYP0 1347 aa22.45■■□□□ 1.18
LETMD1-205ENST00000546992 SHPRHQ149N8 1683 aa22.45■■□□□ 1.18
LETMD1-205ENST00000546992 OVOS2A0A0J9YW53 1432 aa22.44■■□□□ 1.18
LETMD1-205ENST00000546992 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
LETMD1-205ENST00000546992 OVOS2Q6IE36 1432 aa22.44■■□□□ 1.18
LETMD1-205ENST00000546992 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
LETMD1-205ENST00000546992 FYB1O15117 783 aa22.42■■□□□ 1.18
LETMD1-205ENST00000546992 PAK3O75914 559 aaPredicted RBP22.42■■□□□ 1.18
LETMD1-205ENST00000546992 USP31Q70CQ4 1352 aa22.4■■□□□ 1.18
LETMD1-205ENST00000546992 CGNL1Q0VF96 1302 aa22.4■■□□□ 1.18
LETMD1-205ENST00000546992 HSPA1LP34931 641 aa22.4■■□□□ 1.18
LETMD1-205ENST00000546992 KNSTRNQ9Y448 316 aa22.4■■□□□ 1.18
LETMD1-205ENST00000546992 SLIT3O75094 1523 aa22.4■■□□□ 1.18
LETMD1-205ENST00000546992 PNPLA6Q8IY17 1366 aa22.39■■□□□ 1.18
LETMD1-205ENST00000546992 NUTM2GQ5VZR2 741 aa22.39■■□□□ 1.17
LETMD1-205ENST00000546992 FBXO41Q8TF61 875 aa22.39■■□□□ 1.17
LETMD1-205ENST00000546992 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
LETMD1-205ENST00000546992 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
LETMD1-205ENST00000546992 ABTB2Q8N961 1025 aa22.37■■□□□ 1.17
LETMD1-205ENST00000546992 ARHGEF10O15013 1369 aa22.37■■□□□ 1.17
LETMD1-205ENST00000546992 NSD2O96028 1365 aa22.37■■□□□ 1.17
LETMD1-205ENST00000546992 NFAT5O94916 1531 aa22.36■■□□□ 1.17
LETMD1-205ENST00000546992 USP19O94966 1318 aa22.36■■□□□ 1.17
LETMD1-205ENST00000546992 CC2D1BQ5T0F9 858 aaKnown RBP22.35■■□□□ 1.17
LETMD1-205ENST00000546992 LMOD2Q6P5Q4 547 aa22.35■■□□□ 1.17
LETMD1-205ENST00000546992 LRRC59Q96AG4 307 aaKnown RBP22.35■■□□□ 1.17
LETMD1-205ENST00000546992 MAP2P11137 1827 aaKnown RBP22.34■■□□□ 1.17
LETMD1-205ENST00000546992 LTN1O94822 1766 aa22.34■■□□□ 1.17
LETMD1-205ENST00000546992 NLRP6P59044 892 aa22.33■■□□□ 1.17
LETMD1-205ENST00000546992 CNGB1Q14028 1251 aaPredicted RBP22.33■■□□□ 1.17
LETMD1-205ENST00000546992 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
LETMD1-205ENST00000546992 CABLES1Q8TDN4 633 aa22.31■■□□□ 1.16
LETMD1-205ENST00000546992 JCADQ9P266 1359 aa22.3■■□□□ 1.16
LETMD1-205ENST00000546992 PLEKHG5O94827 1062 aa22.3■■□□□ 1.16
LETMD1-205ENST00000546992 PEAK1Q9H792 1746 aa22.3■■□□□ 1.16
LETMD1-205ENST00000546992 NLRP13Q86W25 1043 aa22.29■■□□□ 1.16
LETMD1-205ENST00000546992 COG3Q96JB2 828 aa22.29■■□□□ 1.16
LETMD1-205ENST00000546992 FBLN1P23142 703 aa22.28■■□□□ 1.16
LETMD1-205ENST00000546992 COL18A1P39060 1754 aa22.27■■□□□ 1.16
LETMD1-205ENST00000546992 LRP6O75581 1613 aa22.27■■□□□ 1.16
LETMD1-205ENST00000546992 RGPD5Q99666 1765 aa22.26■■□□□ 1.15
LETMD1-205ENST00000546992 SOX12O15370 315 aa22.25■■□□□ 1.15
LETMD1-205ENST00000546992 DIEXFQ68CQ4 756 aaKnown RBP22.25■■□□□ 1.15
LETMD1-205ENST00000546992 MORC1Q86VD1 984 aa22.25■■□□□ 1.15
LETMD1-205ENST00000546992 GCP02774 474 aa22.24■■□□□ 1.15
LETMD1-205ENST00000546992 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
LETMD1-205ENST00000546992 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
LETMD1-205ENST00000546992 LMO7Q8WWI1 1683 aa22.23■■□□□ 1.15
LETMD1-205ENST00000546992 AATKQ6ZMQ8 1374 aa22.23■■□□□ 1.15
LETMD1-205ENST00000546992 SMG6Q86US8 1419 aaKnown RBP22.23■■□□□ 1.15
LETMD1-205ENST00000546992 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
LETMD1-205ENST00000546992 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
LETMD1-205ENST00000546992 KIAA0232Q92628 1395 aa22.19■■□□□ 1.14
LETMD1-205ENST00000546992 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
LETMD1-205ENST00000546992 CPDO75976 1380 aa22.18■■□□□ 1.14
LETMD1-205ENST00000546992 MAP3K19Q56UN5 1328 aa22.18■■□□□ 1.14
LETMD1-205ENST00000546992 PPP2R1AP30153 589 aa22.18■■□□□ 1.14
LETMD1-205ENST00000546992 KCNH5Q8NCM2 988 aa22.18■■□□□ 1.14
LETMD1-205ENST00000546992 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
LETMD1-205ENST00000546992 SPATA31A6Q5VVP1 1343 aa22.17■■□□□ 1.14
LETMD1-205ENST00000546992 ZC3H6P61129 1189 aaKnown RBP22.17■■□□□ 1.14
LETMD1-205ENST00000546992 RALBP1Q15311 655 aa22.17■■□□□ 1.14
LETMD1-205ENST00000546992 ARHGEF25Q86VW2 580 aa22.17■■□□□ 1.14
LETMD1-205ENST00000546992 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
LETMD1-205ENST00000546992 NUTM2BA6NNL0 878 aaPredicted RBP22.16■■□□□ 1.14
LETMD1-205ENST00000546992 NUTM2EB1AL46 878 aaPredicted RBP22.16■■□□□ 1.14
LETMD1-205ENST00000546992 NUTM2AQ8IVF1 878 aaPredicted RBP22.16■■□□□ 1.14
LETMD1-205ENST00000546992 NRAPQ86VF7 1730 aa22.16■■□□□ 1.14
LETMD1-205ENST00000546992 ABCC6O95255 1503 aa22.16■■□□□ 1.14
LETMD1-205ENST00000546992 COL3A1P02461 1466 aaPredicted RBP22.15■■□□□ 1.14
LETMD1-205ENST00000546992 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
LETMD1-205ENST00000546992 ANP32CO43423 234 aa22.15■■□□□ 1.14
LETMD1-205ENST00000546992 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
LETMD1-205ENST00000546992 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.13
LETMD1-205ENST00000546992 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
LETMD1-205ENST00000546992 MYBBP1AQ9BQG0 1328 aaKnown RBP22.13■■□□□ 1.13
LETMD1-205ENST00000546992 HAP1P54257 671 aaPredicted RBP22.13■■□□□ 1.13
LETMD1-205ENST00000546992 CHRNA2Q15822 529 aa22.13■■□□□ 1.13
LETMD1-205ENST00000546992 NWD2Q9ULI1 1742 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms